Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19007 Trifolium pratense HOM05D007434 ORTHO05D009541 1.3e-41 172.6 85 100.0
Lalb_Chr05g0213221 Lupinus albus HOM05D007434 ORTHO05D009541 2.5e-19 98.6 95 56.8
Lj4g0023681 Lotus japonicus HOM05D007434 ORTHO05D009541 2.1e-18 95.5 104 54.8
Glyma.17G176500 Glycine max HOM05D007434 ORTHO05D009541 2.7e-18 95.1 87 58.6
Lalb_Chr16g0378251 Lupinus albus HOM05D007434 ORTHO05D009541 2.7e-18 95.1 106 53.8
Lalb_Chr16g0378431 Lupinus albus HOM05D007434 ORTHO05D009541 2.7e-18 95.1 106 53.8
Glyma.05G083900 Glycine max HOM05D007434 ORTHO05D009541 7.9e-18 93.6 87 58.6
Phvul.003G245601 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 1.8e-17 92.4 91 57.1
Lj2g0001941 Lotus japonicus HOM05D007434 ORTHO05D009541 6.9e-14 80.5 98 52.0
Manes.12G100300 Manihot esculenta HOM05D007434 ORTHO05D009541 4.6e-10 67.8 93 46.2
Glyma.11G057400 Glycine max HOM05D007434 ORTHO05D009541 7.9e-10 67.0 101 45.5
Potri.007G041400 Populus trichocarpa HOM05D007434 ORTHO05D009541 1.4e-09 66.2 93 45.2
Manes.13G126300 Manihot esculenta HOM05D007434 ORTHO05D009541 3.0e-09 65.1 84 44.0
Oeu050758.1 Olea europaea HOM05D007434 ORTHO05D009541 3.9e-09 64.7 83 43.4
Glyma.01G184800 Glycine max HOM05D007434 ORTHO05D009541 5.1e-09 64.3 101 47.5
FAN26G1295 Fragaria x ananassa HOM05D007434 ORTHO05D019139 1.1e-08 63.2 90 38.9
Thecc.01G053200 Theobroma cacao HOM05D007434 ORTHO05D009541 1.1e-08 63.2 91 44.0
Atru.chr3.395 Acer truncatum HOM05D007434 ORTHO05D013638 1.5e-08 62.8 99 41.4
COL.COLO4_11385 Corchorus olitorius HOM05D007434 ORTHO05D009541 1.5e-08 62.8 95 44.2
FAN28G0171 Fragaria x ananassa HOM05D007434 ORTHO05D009541 1.9e-08 62.4 90 38.9
arahy.Tifrunner.gnm1.ann1.68HAUH Arachis hypogaea HOM05D048825 ORTHO05D009541 2.5e-08 62.0 78 48.7
arahy.Tifrunner.gnm1.ann1.M8F4SW Arachis hypogaea HOM05D048825 ORTHO05D009541 3.3e-08 61.6 78 48.7
Lj4g0021906 Lotus japonicus HOM05D007434 ORTHO05D009541 4.3e-08 61.2 75 44.0
DCAR_025721 Daucus carota HOM05D007434 ORTHO05D009541 7.4e-08 60.5 87 40.2
CiPaw.01G021300 Carya illinoinensis HOM05D007434 ORTHO05D009541 1.3e-07 59.7 81 40.7
Sed0015330 Sechium edule HOM05D007434 ORTHO05D009541 1.3e-07 59.7 90 43.3
arahy.Tifrunner.gnm1.ann1.T0173K Arachis hypogaea HOM05D007434 ORTHO05D009541 2.2e-07 58.9 82 48.8
Nn1g05851 Nelumbo nucifera HOM05D007434 ORTHO05D009541 4.8e-07 57.8 92 41.3
Sed0004872 Sechium edule HOM05D007434 ORTHO05D009541 4.8e-07 57.8 94 38.3
Gohir.A11G190600 Gossypium hirsutum HOM05D007434 ORTHO05D009541 8.2e-07 57.0 94 42.6
FvH4_1g15720 Fragaria vesca HOM05D007434 ORTHO05D009541 1.1e-06 56.6 78 38.5
FAN19G1812 Fragaria x ananassa HOM05D007434 ORTHO05D019139 1.1e-06 56.6 78 38.5
QL06p042177 Quercus lobata HOM05D007434 ORTHO05D009541 1.1e-06 56.6 82 42.7
Lalb_Chr05g0213231 Lupinus albus HOM05D007434 ORTHO05D009541 1.4e-06 56.2 78 44.9
QL06p042201 Quercus lobata HOM05D007434 ORTHO05D009541 1.8e-06 55.8 91 41.8
Gorai.007G211200 Gossypium raimondii HOM05D007434 ORTHO05D009541 3.1e-06 55.1 94 40.4
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 3.1e-06 55.1 107 35.5
Gohir.A11G046200 Gossypium hirsutum HOM05D007434 ORTHO05D009541 4.1e-06 54.7 78 41.0
Lalb_Chr09g0333721 Lupinus albus HOM05D007434 ORTHO05D009541 4.1e-06 54.7 82 36.6
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 4.1e-06 54.7 104 36.5
VMungo1083G0001 Vigna mungo HOM05D007434 ORTHO05D009541 4.1e-06 54.7 36 75.0
Gohir.D11G197400 Gossypium hirsutum HOM05D007434 ORTHO05D009541 5.3e-06 54.3 94 39.4
Nn1g05850 Nelumbo nucifera HOM05D007434 ORTHO05D009541 5.3e-06 54.3 92 40.2
Sed0002185 Sechium edule HOM05D007434 ORTHO05D009541 5.3e-06 54.3 97 37.1
Ciclev10027212m.g Citrus clementina HOM05D007434 ORTHO05D009541 6.9e-06 53.9 82 43.9
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 6.9e-06 53.9 104 37.5


User provided reference genes

Program Settings