Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18975 Trifolium pratense HOM05D007930 ORTHO05D030188 5.0e-67 257.7 135 100.0
Medtr3g055517 Medicago truncatula HOM05D007930 ORTHO05D030188 1.5e-31 139.8 128 56.2
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 1.0e-27 127.1 137 56.2
PGSC0003DMG400041847 Solanum tuberosum HOM05D007930 ORTHO05D007166 5.5e-13 78.2 119 39.5
Sopen11g012950 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-10 70.1 83 42.2
Sopen08g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 1.9e-10 69.7 112 37.5
Sopen05g025930 Solanum pennellii HOM05D007930 ORTHO05D007166 2.5e-10 69.3 83 41.0
Sopen07g016830 Solanum pennellii HOM05D007930 ORTHO05D007166 2.5e-10 69.3 117 39.3
Sopen12g018140 Solanum pennellii HOM05D007930 ORTHO05D007166 2.5e-10 69.3 83 42.2
Sopen04g019100 Solanum pennellii HOM05D007930 ORTHO05D007166 3.3e-10 68.9 83 42.2
Sopen10g014360 Solanum pennellii HOM05D007930 ORTHO05D007166 4.3e-10 68.6 83 41.0
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.3e-10 68.6 117 37.6
Sopen05g019850 Solanum pennellii HOM05D007930 ORTHO05D007166 5.6e-10 68.2 83 41.0
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 9.6e-10 67.4 121 33.9
Sopen03g014010 Solanum pennellii HOM05D000014 ORTHO05D000016 9.6e-10 67.4 83 41.0
Psat4g079480 Pisum sativum HOM05D009811 ORTHO05D007166 1.3e-09 67.0 137 32.8
Psat5g249440 Pisum sativum HOM05D009811 ORTHO05D007166 1.3e-09 67.0 128 33.6
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 1.6e-09 66.6 116 34.5
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 2.1e-09 66.2 83 41.0
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 2.8e-09 65.9 130 35.4
Sopen06g013750 Solanum pennellii HOM05D007930 ORTHO05D007166 2.8e-09 65.9 83 41.0
Sopen08g014730 Solanum pennellii HOM05D007930 ORTHO05D007166 3.7e-09 65.5 54 53.7
Psat3g052720 Pisum sativum HOM05D009811 ORTHO05D007166 6.2e-09 64.7 137 33.6
Sopen01g007980 Solanum pennellii HOM05D007930 ORTHO05D007166 8.2e-09 64.3 83 39.8
PGSC0003DMG400046611 Solanum tuberosum HOM05D007930 ORTHO05D007166 8.2e-09 64.3 54 51.9
Sopen05g026070 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-08 63.9 83 39.8
Psat6g116840 Pisum sativum HOM05D008859 ORTHO05D007166 1.8e-08 63.2 142 32.4
Sopen01g016030 Solanum pennellii HOM05D000014 ORTHO05D000016 1.8e-08 63.2 119 37.0
Sopen02g002790 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-08 63.2 52 53.8
Sopen08g008350 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-08 63.2 117 36.8
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 2.4e-08 62.8 43 67.4
Psat3g053800 Pisum sativum HOM05D009811 ORTHO05D007166 2.4e-08 62.8 116 32.8
Sopen10g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 2.4e-08 62.8 129 33.3
Sopen11g021520 Solanum pennellii HOM05D007930 ORTHO05D007166 2.4e-08 62.8 79 40.5
PGSC0003DMG400042507 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.4e-08 62.8 83 39.8
PGSC0003DMG400044598 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.4e-08 62.8 54 50.0
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 3.1e-08 62.4 142 32.4
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 3.1e-08 62.4 142 32.4
Sopen02g001050 Solanum pennellii HOM05D007930 ORTHO05D007166 3.1e-08 62.4 83 39.8
Sopen05g024480 Solanum pennellii HOM05D007930 ORTHO05D007166 3.1e-08 62.4 78 39.7
Sopen06g016400 Solanum pennellii HOM05D007930 ORTHO05D007166 3.1e-08 62.4 109 33.0
Sopen08g007710 Solanum pennellii HOM05D007930 ORTHO05D007166 3.1e-08 62.4 79 38.0
Sopen09g008030 Solanum pennellii HOM05D007930 ORTHO05D007166 3.1e-08 62.4 128 34.4
Sopen12g016200 Solanum pennellii HOM05D007930 ORTHO05D007166 3.1e-08 62.4 114 38.6
Sopen03g018540 Solanum pennellii HOM05D007930 ORTHO05D007166 6.9e-08 61.2 78 39.7
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 9.0e-08 60.8 125 32.0
Phvul.010G109450 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 1.2e-07 60.5 115 34.8
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 1.2e-07 60.5 138 31.9
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 1.5e-07 60.1 122 32.8
Sopen00g009310 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-07 60.1 83 39.8
Sopen08g011060 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-07 60.1 127 33.9
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 2.6e-07 59.3 135 31.1
Psat7g163400 Pisum sativum HOM05D008859 ORTHO05D007166 3.4e-07 58.9 142 31.0
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 3.4e-07 58.9 111 36.9
Sopen02g002760 Solanum pennellii HOM05D007930 ORTHO05D007166 3.4e-07 58.9 54 50.0
Sopen01g024790 Solanum pennellii HOM05D007930 ORTHO05D007166 4.5e-07 58.5 47 57.4
Sopen10g018630 Solanum pennellii HOM05D007930 ORTHO05D007166 4.5e-07 58.5 40 65.0
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 4.5e-07 58.5 111 36.0
arahy.Tifrunner.gnm1.ann1.AC3I93 Arachis hypogaea HOM05D007930 ORTHO05D011783 7.6e-07 57.8 54 51.9
Sopen07g010680 Solanum pennellii HOM05D007930 ORTHO05D007166 7.6e-07 57.8 132 31.8
Sopen08g014940 Solanum pennellii HOM05D000004 ORTHO05D007166 7.6e-07 57.8 44 59.1
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 7.6e-07 57.8 130 33.1
Psat7g186280 Pisum sativum HOM05D007930 ORTHO05D030188 1.3e-06 57.0 50 62.0
PGSC0003DMG400046364 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.2e-06 56.2 118 30.5


User provided reference genes

Program Settings