Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 9.3e-155 550.4 334 100.0
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 1.1e-136 490.3 334 85.9
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 2.5e-131 472.6 334 84.1
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 2.1e-114 416.4 327 76.1
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 1.0e-113 414.1 329 72.0
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 1.6e-109 400.2 339 71.4
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 7.2e-107 391.3 325 70.8
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 1.2e-106 390.6 363 63.1
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 3.6e-106 389.0 336 70.8
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 2.2e-103 379.8 340 73.8
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 7.7e-101 371.3 325 67.1
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 4.0e-97 359.0 328 69.5
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 2.0e-96 356.7 324 65.1
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 5.7e-96 355.1 323 65.0
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 1.7e-95 353.6 325 62.5
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 2.8e-95 352.8 322 64.9
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 1.4e-94 350.5 329 63.8
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 1.8e-94 350.1 325 69.5
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 4.1e-94 349.0 327 63.9
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 7.0e-94 348.2 330 63.9
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 4.5e-93 345.5 328 65.2
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 5.9e-93 345.1 328 62.5
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 5.9e-93 345.1 322 64.9
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 5.9e-93 345.1 325 64.6
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 5.0e-92 342.0 330 63.0
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.5e-91 339.7 326 68.4
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 4.2e-91 339.0 330 63.3
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 4.2e-91 339.0 324 64.2
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 5.5e-91 338.6 329 59.6
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 7.2e-91 338.2 325 68.0
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 1.2e-90 337.4 326 66.3
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 3.6e-90 335.9 326 66.0
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 6.1e-90 335.1 324 61.7
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 1.0e-89 334.3 329 60.5
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 1.4e-89 334.0 330 65.8
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 1.4e-89 334.0 330 65.8
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 2.3e-89 333.2 321 58.6
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 5.2e-89 332.0 326 64.1
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 5.2e-89 332.0 322 68.9
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 6.8e-89 331.6 330 66.4
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.2e-88 330.9 326 62.3
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 1.5e-88 330.5 324 59.6
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 5.7e-88 328.6 327 67.3
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 7.5e-88 328.2 322 63.7
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 3.7e-87 325.9 326 62.3
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 2.4e-86 323.2 323 64.7
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 2.4e-86 323.2 326 61.7
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 9.2e-86 321.2 322 62.4
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 1.2e-85 320.9 326 61.7
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.6e-85 320.5 322 61.8
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 4.5e-85 318.9 317 61.8
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 5.9e-85 318.5 350 54.6
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 5.9e-85 318.5 328 59.1
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 1.0e-84 317.8 323 66.3
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 1.7e-84 317.0 324 60.8
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 2.9e-84 316.2 323 65.6
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 3.8e-84 315.8 326 59.8
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 5.0e-84 315.5 324 60.2
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 3.3e-83 312.8 324 62.7
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 7.3e-83 311.6 329 58.1
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 7.3e-83 311.6 329 61.4
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 6.1e-82 308.5 350 53.1
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 1.0e-81 307.8 325 58.8
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 2.3e-81 306.6 326 57.7
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 2.3e-81 306.6 321 59.5
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 5.2e-81 305.4 325 59.4
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 5.2e-81 305.4 323 60.1
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 2.0e-80 303.5 326 58.3
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 5.7e-80 302.0 325 58.8
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 5.7e-80 302.0 319 59.6
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 1.7e-79 300.4 329 58.1
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 1.7e-79 300.4 325 58.8
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 2.2e-79 300.1 323 59.4
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 2.2e-79 300.1 319 63.6
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.9e-79 299.7 333 59.2
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 8.3e-79 298.1 323 57.9
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 3.2e-78 296.2 327 57.8
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 7.0e-78 295.0 320 62.5
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 9.2e-78 294.7 316 60.1
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 3.5e-77 292.7 325 57.2
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 7.8e-77 291.6 208 70.7
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 1.3e-76 290.8 327 58.1
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 1.3e-76 290.8 316 62.7
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 8.6e-76 288.1 323 63.5
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 8.6e-76 288.1 323 63.5
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 2.5e-75 286.6 337 46.6
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 3.3e-75 286.2 323 63.2
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 3.3e-75 286.2 316 62.0
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 7.3e-75 285.0 316 61.7
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 6.2e-74 282.0 324 58.0
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 4.0e-73 279.3 327 55.4
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 2.9e-71 273.1 325 60.0
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 5.0e-68 262.3 285 61.1
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 9.5e-67 258.1 330 47.9
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 2.6e-64 250.0 282 61.7
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 9.8e-64 248.1 325 57.8
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 1.6e-61 240.7 327 56.0
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 1.0e-60 238.0 312 53.5
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 3.4e-56 223.0 320 49.4
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 7.1e-54 215.3 207 50.2
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.7e-53 213.4 210 51.4
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.3e-52 210.3 202 50.5
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 6.6e-52 208.8 209 50.7
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 1.5e-51 207.6 167 57.5
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.3e-51 206.5 196 51.0
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 3.4e-48 196.4 253 40.7
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 1.7e-47 194.1 167 64.7
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 9.3e-46 188.3 170 52.9
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 4.8e-42 176.0 167 51.5
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 1.1e-41 174.9 167 51.5
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 1.1e-41 174.9 228 42.5
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 4.9e-39 166.0 167 58.7
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 4.8e-34 149.4 210 64.3
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 2.1e-29 134.0 346 42.2
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.8e-28 131.0 170 44.1
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 4.8e-26 122.9 108 56.5
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 1.8e-25 120.9 253 31.2
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 6.9e-25 119.0 79 70.9
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 7.6e-24 115.5 115 51.3
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 4.9e-23 112.8 169 43.8
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 5.5e-22 109.4 134 44.0
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 2.8e-18 97.1 70 67.1
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 9.0e-17 92.0 89 50.6
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 9.3e-14 82.0 64 59.4
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 3.0e-12 77.0 347 26.5
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 5.1e-12 76.3 233 43.8
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 3.3e-11 73.6 128 34.4
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 6.9e-09 65.9 58 58.6
Rhsim12G0155600 Rhododendron simsii HOM05D005795 ORTHO05D007200 7.7e-08 62.4 44 70.5
Rhsim05G0171500 Rhododendron simsii HOM05D005795 ORTHO05D007200 3.8e-07 60.1 45 62.2


User provided reference genes

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