Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18859 Trifolium pratense HOM05D002451 ORTHO05D005601 1.1e-145 520.0 262 100.0
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 7.1e-33 145.2 98 83.7
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 3.5e-32 142.9 96 82.3
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 7.3e-30 135.2 100 75.0
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 2.0e-27 127.1 94 75.5
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 4.9e-26 122.5 94 72.3
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 1.4e-25 120.9 100 67.0
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 7.8e-24 115.2 98 65.3
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 1.0e-23 114.8 96 64.6
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 3.9e-23 112.8 110 60.0
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 5.6e-22 109.0 133 55.6
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 1.2e-21 107.8 87 69.0
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 5.4e-17 92.4 103 53.4
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 6.6e-15 85.5 101 45.5
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 1.1e-14 84.7 110 46.4
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 1.5e-14 84.3 103 46.6
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 4.3e-14 82.8 110 45.5
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 4.3e-14 82.8 113 45.1
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 5.6e-14 82.4 106 48.1
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 1.6e-13 80.9 106 46.2
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 2.1e-13 80.5 110 43.6
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 2.8e-13 80.1 110 44.5
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 2.8e-13 80.1 100 46.0
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 2.8e-13 80.1 107 46.7
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 3.6e-13 79.7 89 50.6
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 1.1e-12 78.2 103 45.6
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 1.8e-12 77.4 103 45.6
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 1.5e-11 74.3 102 48.0
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.5e-11 74.3 106 41.5
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 2.0e-11 73.9 88 51.1
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 3.4e-11 73.2 103 42.7
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 3.4e-11 73.2 100 43.0
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 4.4e-11 72.8 105 46.7
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 7.6e-11 72.0 103 41.7
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 1.7e-10 70.9 89 47.2
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 1.7e-10 70.9 110 42.7
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 2.2e-10 70.5 102 41.2
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 2.2e-10 70.5 103 41.7
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 2.9e-10 70.1 102 46.1
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 2.9e-10 70.1 89 46.1
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 2.9e-10 70.1 103 41.7
CSS0023144 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 4.9e-10 69.3 101 41.6
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 4.9e-10 69.3 103 41.7
Peaxi162Scf00038g01032 Petunia axillaris HOM05D002451 ORTHO05D005601 6.4e-10 68.9 106 42.5
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 1.4e-09 67.8 103 38.8
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 1.9e-09 67.4 106 46.2
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 2.4e-09 67.0 106 43.4
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 2.4e-09 67.0 106 40.6
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 3.2e-09 66.6 101 39.6
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 5.4e-09 65.9 95 40.0
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 1.2e-08 64.7 106 41.5
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 2.7e-08 63.5 103 39.8
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 4.6e-08 62.8 119 37.0
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 4.6e-08 62.8 87 47.1
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 4.6e-08 62.8 99 42.4
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 4.6e-08 62.8 103 39.8
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 4.6e-08 62.8 103 39.8
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 6.0e-08 62.4 132 36.4
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 7.8e-08 62.0 114 39.5
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 1.0e-07 61.6 88 40.9
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 1.3e-07 61.2 106 37.7
ClCG09G000210 Citrullus lanatus HOM05D002451 ORTHO05D005601 2.3e-07 60.5 87 43.7
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 2.3e-07 60.5 88 43.2
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 3.0e-07 60.1 87 46.0
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 3.9e-07 59.7 103 38.8
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 3.9e-07 59.7 113 35.4
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 4.3e-06 56.2 108 37.0
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 4.3e-06 56.2 108 37.0
Cpa.g.sc25.8 Carica papaya HOM05D002451 ORTHO05D005601 7.3e-06 55.5 72 50.0


User provided reference genes

Program Settings