Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18857 Trifolium pratense HOM05D010840 ORTHO05D009787 7.4e-244 847.0 516 100.0
Medtr2g098620 Medicago truncatula HOM05D010840 ORTHO05D009787 1.8e-141 506.9 533 69.6
TPR.G12768 Trifolium pratense HOM05D010840 ORTHO05D009787 1.8e-136 490.3 527 59.8
Medtr2g098610 Medicago truncatula HOM05D010840 ORTHO05D009787 5.3e-133 478.8 529 63.3
Psat1g007360 Pisum sativum HOM05D010840 ORTHO05D009787 2.6e-87 327.0 465 52.0
Ca_01266_v3 Cicer arietinum L. HOM05D010840 ORTHO05D009787 1.1e-85 321.6 569 43.1
Psat1g007320 Pisum sativum HOM05D010840 ORTHO05D009787 2.7e-84 317.0 487 49.5
Lalb_Chr24g0396871 Lupinus albus HOM05D010840 ORTHO05D009787 1.3e-38 165.2 635 32.8
arahy.Tifrunner.gnm1.ann1.JQ8CCA Arachis hypogaea HOM05D010840 ORTHO05D009787 1.3e-33 148.7 581 30.1
Lj3g0021471 Lotus japonicus HOM05D010840 ORTHO05D009787 2.7e-28 131.0 129 62.0
Glyma.12G053300 Glycine max HOM05D010840 ORTHO05D009787 1.2e-23 115.5 184 42.4
Lalb_Chr22g0352191 Lupinus albus HOM05D010840 ORTHO05D009787 1.5e-23 115.2 512 33.8
Glyma.15G030900 Glycine max HOM05D010840 ORTHO05D009787 1.7e-22 111.7 410 41.5
VMungo1080G1829 Vigna mungo HOM05D002632 ORTHO05D002881 1.4e-21 108.6 173 43.4
Glyma.11G128800 Glycine max HOM05D010840 ORTHO05D009787 1.9e-21 108.2 194 42.3
VMungo1127G1898 Vigna mungo HOM05D010840 ORTHO05D009787 3.2e-21 107.5 168 42.9
Phvul.005G152200 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 2.1e-20 104.8 210 41.0
arahy.Tifrunner.gnm1.ann1.0UQ2B1 Arachis hypogaea HOM05D010840 ORTHO05D009787 3.5e-20 104.0 438 33.8
Phvul.011G055300 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 6.1e-20 103.2 177 41.8
Glyma.13G343400 Glycine max HOM05D010840 ORTHO05D009787 2.5e-18 97.8 177 43.5
QL10p048331 Quercus lobata HOM05D008213 ORTHO05D009787 2.5e-18 97.8 290 30.3
Dinv44200 Davidia involucrata HOM05D008213 ORTHO05D009787 4.6e-12 77.0 279 28.0
CiPaw.01G101800 Carya illinoinensis HOM05D008213 ORTHO05D009787 1.8e-11 75.1 228 28.5
DCAR_017617 Daucus carota HOM05D008213 ORTHO05D009787 1.8e-11 75.1 277 26.7
CSS0004350 Camellia sinensis var. sinensis HOM05D008213 ORTHO05D009787 3.9e-11 73.9 170 32.9
GSVIVG01010744001 Vitis vinifera HOM05D008213 ORTHO05D009787 8.8e-11 72.8 204 31.9
Duzib151G0756 Durio zibethinus HOM05D008213 ORTHO05D009787 1.5e-10 72.0 290 25.9
Hma1.2p1_0754F.1_g213080 Hydrangea macrophylla HOM05D008213 ORTHO05D009787 1.5e-10 72.0 223 29.1
Gohir.D02G016500 Gossypium hirsutum HOM05D008213 ORTHO05D009787 7.4e-10 69.7 210 29.0
Gorai.005G020000 Gossypium raimondii HOM05D008213 ORTHO05D009787 7.4e-10 69.7 218 30.7
Thecc.04G185000 Theobroma cacao HOM05D008213 ORTHO05D009787 9.7e-10 69.3 284 26.1
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 2.8e-09 67.8 210 28.6
Prupe.1G190600 Prunus persica HOM05D008213 ORTHO05D009787 3.7e-09 67.4 227 26.9
Manes.11G119400 Manihot esculenta HOM05D008213 ORTHO05D009787 4.8e-09 67.0 210 28.6
Potri.007G127200 Populus trichocarpa HOM05D008213 ORTHO05D009787 9.1e-08 62.8 206 28.2
Sabra07G0103200 Salix brachista HOM05D008213 ORTHO05D009787 2.0e-07 61.6 200 28.0
Cpa.g.sc71.7 Carica papaya HOM05D008213 ORTHO05D009787 2.6e-07 61.2 136 32.4
RcHm_v2.0_Chr4g0407081 Rosa chinensis HOM05D008213 ORTHO05D009787 3.4e-07 60.8 272 25.7


User provided reference genes

Program Settings