Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18743 Trifolium pratense HOM05D002536 ORTHO05D006290 2.8e-61 238.4 118 100.0
Ca_05868_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 9.5e-38 160.2 171 55.0
Glyma.14G068800 Glycine max HOM05D002536 ORTHO05D006290 8.1e-37 157.1 171 54.4
Glyma.02G247400 Glycine max HOM05D002536 ORTHO05D006290 4.0e-36 154.8 171 54.4
LjContig00141g0005291 Lotus japonicus HOM05D002536 ORTHO05D006290 5.2e-36 154.5 171 53.2
Psat2g045240 Pisum sativum HOM05D002536 ORTHO05D006290 5.2e-36 154.5 171 53.8
Phvul.008G233500 Phaseolus vulgaris HOM05D002536 ORTHO05D006290 6.8e-36 154.1 171 52.0
VMungo0647G1217 Vigna mungo HOM05D002536 ORTHO05D006290 1.2e-35 153.3 171 52.6
Medtr5g079770 Medicago truncatula HOM05D002536 ORTHO05D006290 3.8e-34 148.3 171 53.2
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea HOM05D002536 ORTHO05D006290 2.7e-32 142.1 173 50.3
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea HOM05D002536 ORTHO05D006290 2.7e-32 142.1 173 50.3
Cfa007855 Carpinus fangiana HOM05D002536 ORTHO05D006290 2.7e-32 142.1 171 50.3
Dinv19005 Davidia involucrata HOM05D002536 ORTHO05D006290 2.7e-32 142.1 171 50.3
Lalb_Chr04g0251281 Lupinus albus HOM05D002536 ORTHO05D006290 3.5e-32 141.7 171 48.5
Thecc.04G122200 Theobroma cacao HOM05D002536 ORTHO05D006290 4.6e-32 141.4 171 49.7
TAR371G0457 Trochodendron aralioides HOM05D002536 ORTHO05D006290 1.3e-31 139.8 171 48.5
COL.COLO4_15704 Corchorus olitorius HOM05D002536 ORTHO05D006290 3.0e-31 138.7 171 48.0
Lalb_Chr04g0249391 Lupinus albus HOM05D002536 ORTHO05D006290 3.0e-31 138.7 171 49.1
CiPaw.04G045800 Carya illinoinensis HOM05D002536 ORTHO05D006290 3.9e-31 138.3 172 48.3
MD09G1261000 Malus domestica HOM05D002536 ORTHO05D006290 3.9e-31 138.3 171 46.8
Atru.chr4.1673 Acer truncatum HOM05D002536 ORTHO05D006290 8.6e-31 137.1 170 48.8
Prupe.3G158200 Prunus persica HOM05D002536 ORTHO05D006290 8.6e-31 137.1 171 47.4
FAN28G0504 Fragaria x ananassa HOM05D002536 ORTHO05D006290 1.1e-30 136.7 171 46.8
Ciclev10011939m.g Citrus clementina HOM05D002536 ORTHO05D006290 1.5e-30 136.3 171 47.4
FAN28G1150 Fragaria x ananassa HOM05D002536 ORTHO05D006290 1.5e-30 136.3 171 46.8
Gohir.D08G062400 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.5e-30 136.3 171 47.4
Gohir.A08G052800 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.9e-30 136.0 171 46.8
Gorai.004G064600 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.9e-30 136.0 171 46.8
Manes.01G115300 Manihot esculenta HOM05D002536 ORTHO05D006290 1.9e-30 136.0 173 45.1
THA.LOC104805600 Tarenaya hassleriana HOM05D002536 ORTHO05D006290 1.9e-30 136.0 172 44.2
CANSAT78G2192 Cannabis sativa HOM05D002536 ORTHO05D006290 3.3e-30 135.2 171 46.2
Lj4A178G42 Lonicera japonica HOM05D002536 ORTHO05D006290 3.3e-30 135.2 171 45.6
RcHm_v2.0_Chr3g0492101 Rosa chinensis HOM05D002536 ORTHO05D006290 3.3e-30 135.2 171 45.6
HanXRQChr11g0325221 Helianthus annuus HOM05D002536 ORTHO05D006290 4.3e-30 134.8 171 45.6
PGR004G1192 Punica granatum HOM05D002536 ORTHO05D006290 4.3e-30 134.8 171 45.6
Carub.0002s1253 Capsella rubella HOM05D002536 ORTHO05D006290 7.3e-30 134.0 172 43.6
GSVIVG01030877001 Vitis vinifera HOM05D002536 ORTHO05D006290 7.3e-30 134.0 171 46.8
CARHR058490 Cardamine hirsuta HOM05D002536 ORTHO05D006290 1.2e-29 133.3 168 42.9
BraA07t30972Z Brassica rapa HOM05D002536 ORTHO05D006290 1.6e-29 132.9 174 44.3
FvH4_1g30040 Fragaria vesca HOM05D002536 ORTHO05D006290 1.6e-29 132.9 171 45.6
FAN19G0538 Fragaria x ananassa HOM05D002536 ORTHO05D006290 1.6e-29 132.9 171 45.6
BcaB03g15263 Brassica carinata HOM05D002536 ORTHO05D006290 2.1e-29 132.5 174 43.1
BcaC08g46049 Brassica carinata HOM05D002536 ORTHO05D006290 2.1e-29 132.5 174 43.7
Sc11g0008590 Simmondsia chinensis HOM05D002536 ORTHO05D006290 2.1e-29 132.5 171 46.2
Lsat_1_v5_gn_4_154740 Lactuca sativa HOM05D002536 ORTHO05D006290 2.8e-29 132.1 171 43.9
Peaxi162Scf00803g00527 Petunia axillaris HOM05D002536 ORTHO05D006290 3.6e-29 131.7 171 45.6
A07p33460 Brassica napus HOM05D002536 ORTHO05D006290 4.7e-29 131.3 174 43.7
BolC6t39073H Brassica oleracea HOM05D002536 ORTHO05D006290 4.7e-29 131.3 174 43.1
Cc07_g08220 Coffea canephora HOM05D002536 ORTHO05D006290 4.7e-29 131.3 171 45.6
Actinidia15923 Actinidia chinensis HOM05D002536 ORTHO05D006290 8.1e-29 130.6 171 44.4
C06p39850 Brassica napus HOM05D002536 ORTHO05D006290 8.1e-29 130.6 174 44.8
Thhalv10018669m.g Eutrema salsugineum HOM05D002536 ORTHO05D006290 8.1e-29 130.6 172 42.4
AL2G23020 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 1.4e-28 129.8 172 41.9
QL11p004257 Quercus lobata HOM05D002536 ORTHO05D006290 1.4e-28 129.8 171 47.4
PGSC0003DMG400030643 Solanum tuberosum HOM05D002536 ORTHO05D006290 1.8e-28 129.4 171 44.4
Aa31LG2G3150 Aethionema arabicum HOM05D002536 ORTHO05D006290 2.4e-28 129.0 172 42.4
Nitab4.5_0002248g0030 Nicotiana tabacum HOM05D002536 ORTHO05D006290 2.4e-28 129.0 171 43.9
Sp5g21560 Schrenkiella parvula HOM05D002536 ORTHO05D006290 2.4e-28 129.0 172 42.4
Solyc02g091330.4 Solanum lycopersicum HOM05D002536 ORTHO05D006290 2.4e-28 129.0 171 44.4
TPR.G3477 Trifolium pratense HOM05D002536 ORTHO05D006290 2.4e-28 129.0 127 61.4
ECA232G3521 Erigeron canadensis HOM05D002536 ORTHO05D006290 3.1e-28 128.6 171 42.7
Nitab4.5_0004399g0050 Nicotiana tabacum HOM05D002536 ORTHO05D006290 3.1e-28 128.6 171 43.3
Sopen02g035950 Solanum pennellii HOM05D002536 ORTHO05D006290 3.1e-28 128.6 171 44.4
AUR62023197 Chenopodium quinoa HOM05D002536 ORTHO05D006290 4.0e-28 128.3 171 43.3
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 5.2e-28 127.9 160 48.8
Eucgr.F02817 Eucalyptus grandis HOM05D002536 ORTHO05D006290 5.2e-28 127.9 171 44.4
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 5.2e-28 127.9 171 43.3
CAN.G625.81 Capsicum annuum HOM05D002536 ORTHO05D006290 6.9e-28 127.5 171 44.4
Duzib211G0581 Durio zibethinus HOM05D002536 ORTHO05D006290 6.9e-28 127.5 171 43.9
AUR62023246 Chenopodium quinoa HOM05D002536 ORTHO05D006290 2.0e-27 125.9 171 42.7
DCAR_022460 Daucus carota HOM05D002536 ORTHO05D006290 2.0e-27 125.9 171 42.1
vmacro05501 Vaccinium macrocarpon HOM05D002536 ORTHO05D006290 2.0e-27 125.9 171 42.7
AT1G66510 Arabidopsis thaliana HOM05D002536 ORTHO05D006290 2.6e-27 125.6 172 40.7
TWI74G1499 Tripterygium wilfordii HOM05D002536 ORTHO05D006290 2.6e-27 125.6 171 43.3
Nn3g18196 Nelumbo nucifera HOM05D002536 ORTHO05D006290 3.4e-27 125.2 171 44.4
Potri.017G123900 Populus trichocarpa HOM05D002536 ORTHO05D006290 3.4e-27 125.2 173 42.8
Rhsim10G0079100 Rhododendron simsii HOM05D002536 ORTHO05D006290 4.4e-27 124.8 171 42.1
EL10Ac2g04489 Beta vulgaris HOM05D002536 ORTHO05D006290 1.3e-26 123.2 171 42.1
Sabra17G0104800 Salix brachista HOM05D002536 ORTHO05D006290 1.7e-26 122.9 173 42.2
SalBow7G0143 Salvia bowleyana HOM05D002536 ORTHO05D006290 1.7e-26 122.9 167 43.1
Aqoxy3G04016 Aquilegia oxysepala HOM05D002536 ORTHO05D006290 3.8e-26 121.7 171 41.5
Migut.L00470 Erythranthe guttata HOM05D002536 ORTHO05D006290 3.8e-26 121.7 171 43.3
Ah.10g037990 Amaranthus hybridus HOM05D002536 ORTHO05D006290 8.4e-26 120.6 171 41.5
Oeu047421.1 Olea europaea HOM05D002536 ORTHO05D006290 8.4e-26 120.6 171 42.1
PSO017G6098 Papaver somniferum HOM05D002536 ORTHO05D006290 1.1e-25 120.2 171 41.5
Os04g0132300 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D006290 1.4e-25 119.8 172 41.9
Sabra17G0102100 Salix brachista HOM05D002536 ORTHO05D006290 1.9e-25 119.4 173 41.6
SGA_v2.0_scaffold329G48866 Striga asiatica HOM05D002536 ORTHO05D006290 3.2e-25 118.6 170 44.1
Zm00001eb088880 Zea mays HOM05D002536 ORTHO05D006290 3.2e-25 118.6 172 40.7
TPR.G3505 Trifolium pratense HOM05D002536 ORTHO05D006290 7.1e-25 117.5 67 88.1
QL11p004402 Quercus lobata HOM05D002536 ORTHO05D006290 1.6e-24 116.3 228 36.0
Hund13689 Selenicereus undatus HOM05D002536 ORTHO05D006290 2.7e-24 115.5 171 40.9
MELO3C020300.2 Cucumis melo HOM05D002536 ORTHO05D006290 3.5e-24 115.2 171 41.5
Ca_05898_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 7.8e-24 114.0 67 86.6
Sed0021694 Sechium edule HOM05D002536 ORTHO05D006290 5.1e-23 111.3 171 38.0
ATR0686G028 Amborella trichopoda HOM05D002536 ORTHO05D006290 8.7e-23 110.5 170 41.8
CDE04G0829 Ceratophyllum demersum HOM05D002536 ORTHO05D006290 8.7e-23 110.5 170 38.8
CsaV3_1G043810 Cucumis sativus L. HOM05D002536 ORTHO05D006290 8.7e-23 110.5 171 40.4
unitig_32.g11881 Utricularia gibba HOM05D002536 ORTHO05D006290 4.8e-21 104.8 170 37.6
SMO196G0007 Selaginella moellendorffii HOM05D002536 ORTHO05D006290 8.1e-21 104.0 179 36.3
Pp3c15_1450 Physcomitrium patens HOM05D002536 ORTHO05D006290 1.1e-20 103.6 181 38.1
TPR.G22657 Trifolium pratense HOM05D002536 ORTHO05D006290 2.2e-18 95.9 54 88.9
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 2.9e-18 95.5 147 41.5
MSTRG.3529 Avicennia marina HOM05D002536 ORTHO05D006290 8.4e-18 94.0 75 65.3
QL11p004418 Quercus lobata HOM05D002536 ORTHO05D006290 3.2e-17 92.0 65 75.4
TPR.G5666 Trifolium pratense HOM05D002536 ORTHO05D006290 9.3e-17 90.5 58 79.3
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis HOM05D002536 ORTHO05D006290 1.8e-15 86.3 185 29.7
TPR.G3492 Trifolium pratense HOM05D002536 ORTHO05D006290 3.0e-15 85.5 42 90.5
Mapoly0209s0005 Marchantia polymorpha HOM05D002536 ORTHO05D006290 5.1e-15 84.7 67 62.7
TPR.G4379 Trifolium pratense HOM05D002536 ORTHO05D006290 4.3e-14 81.6 42 88.1
TPR.G15212 Trifolium pratense HOM05D002536 ORTHO05D006290 7.4e-14 80.9 40 90.0
CBR_g28641 Chara braunii HOM05D002536 ORTHO05D006290 9.0e-12 73.9 67 50.7
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis HOM05D002536 ORTHO05D006290 8.4e-10 67.4 223 24.7
Cpa.g.sc116.21 Carica papaya HOM05D002536 ORTHO05D006290 1.1e-09 67.0 42 66.7


User provided reference genes

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