Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 1.8e-136 489.2 239 100.0
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 8.7e-123 443.7 241 90.9
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 1.4e-117 426.4 244 85.7
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 1.0e-102 377.1 242 76.0
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 3.8e-102 375.2 221 80.1
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.0e-99 367.1 245 72.7
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.8e-99 366.3 245 72.7
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 4.0e-99 365.2 247 74.1
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 5.2e-99 364.8 242 75.2
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 8.8e-99 364.0 237 74.3
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 4.4e-98 361.7 248 72.2
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 4.8e-97 358.2 217 77.0
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 4.1e-96 355.1 244 70.1
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 4.1e-96 355.1 220 76.4
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 9.1e-96 354.0 225 73.8
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.2e-95 353.6 234 71.4
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 1.2e-95 353.6 244 69.3
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 3.5e-95 352.1 252 67.9
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 4.5e-95 351.7 248 69.0
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 5.9e-95 351.3 247 70.0
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 5.9e-95 351.3 217 75.1
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 7.7e-95 350.9 217 75.6
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 1.0e-94 350.5 228 72.8
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 1.3e-94 350.1 238 69.7
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 1.3e-94 350.1 223 74.0
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 1.7e-94 349.7 246 69.9
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 2.2e-94 349.4 228 72.4
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 3.8e-94 348.6 228 72.4
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 1.1e-93 347.1 238 69.7
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 1.5e-93 346.7 238 70.2
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 3.2e-93 345.5 216 74.5
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 3.2e-93 345.5 218 75.2
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 3.2e-93 345.5 233 71.2
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 4.2e-93 345.1 223 72.2
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 4.2e-93 345.1 241 71.4
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 4.2e-93 345.1 217 74.2
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 5.5e-93 344.7 223 73.1
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 5.5e-93 344.7 245 69.0
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 7.2e-93 344.4 217 72.4
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 1.2e-92 343.6 243 67.5
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 2.7e-92 342.4 226 69.9
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 2.7e-92 342.4 216 74.1
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 3.6e-92 342.0 222 71.2
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 8.0e-92 340.9 247 67.6
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 8.0e-92 340.9 217 72.4
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 1.0e-91 340.5 231 70.6
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 1.8e-91 339.7 218 73.9
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 1.8e-91 339.7 235 70.2
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 2.3e-91 339.3 217 73.3
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.0e-91 339.0 217 73.3
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 4.0e-91 338.6 217 71.9
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 6.8e-91 337.8 217 71.4
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 6.8e-91 337.8 217 71.4
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 8.8e-91 337.4 253 67.2
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 8.8e-91 337.4 217 71.4
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 8.8e-91 337.4 231 69.3
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 1.5e-90 336.7 237 67.1
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.5e-90 336.7 217 71.9
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 2.0e-90 336.3 217 73.3
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 2.6e-90 335.9 235 68.1
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 3.4e-90 335.5 212 73.6
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 9.8e-90 334.0 233 69.5
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.4e-88 330.1 216 72.2
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 1.8e-88 329.7 236 65.3
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 1.8e-88 329.7 220 69.1
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 4.1e-88 328.6 220 69.1
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 7.0e-88 327.8 236 65.7
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 9.1e-88 327.4 220 68.6
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 1.2e-87 327.0 220 68.6
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.6e-87 326.6 220 68.6
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 2.0e-87 326.2 220 68.2
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 2.0e-87 326.2 220 68.2
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 2.0e-87 326.2 223 68.2
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 2.7e-87 325.9 216 72.7
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 4.5e-87 325.1 244 64.3
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 5.9e-87 324.7 220 67.7
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 7.7e-87 324.3 238 63.9
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 7.7e-87 324.3 238 63.9
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 7.7e-87 324.3 220 67.7
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 7.7e-87 324.3 220 67.7
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 1.0e-86 323.9 240 64.2
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 1.3e-86 323.6 217 68.2
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 1.3e-86 323.6 225 66.7
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 1.3e-86 323.6 220 66.4
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 2.9e-86 322.4 218 67.9
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 8.6e-86 320.9 264 62.9
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 1.9e-85 319.7 218 69.7
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 2.5e-85 319.3 217 68.2
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 5.5e-85 318.2 220 66.8
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 5.5e-85 318.2 219 68.0
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 7.2e-85 317.8 239 65.7
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 1.8e-83 313.2 217 66.8
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 3.0e-83 312.4 327 51.7
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 4.0e-83 312.0 195 72.8
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 1.5e-82 310.1 224 67.0
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 5.7e-82 308.1 219 67.6
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 2.8e-81 305.8 269 58.4
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 2.0e-74 283.1 199 66.8
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 1.6e-71 273.5 205 63.4
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 1.9e-69 266.5 196 67.3
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 7.3e-69 264.6 184 69.0
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 3.6e-68 262.3 165 73.3
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 3.1e-67 259.2 221 58.8
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.9e-64 250.0 219 56.2
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 7.0e-64 248.1 239 57.7
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 4.7e-60 235.3 220 53.6
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 4.0e-59 232.3 228 51.8
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 2.6e-58 229.6 131 84.7
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 3.5e-55 219.2 141 72.3
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 2.8e-44 183.0 101 80.2
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 1.3e-41 174.1 218 44.0
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 9.3e-40 167.9 210 44.8
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 4.5e-34 149.1 143 57.3
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 4.5e-34 149.1 143 57.3
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 1.4e-32 144.1 99 68.7
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 1.9e-32 143.7 212 39.6
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 8.7e-30 134.8 210 38.6
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.7e-25 120.6 105 60.0
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 4.9e-25 119.0 84 67.9
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 3.2e-24 116.3 95 60.0
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 5.5e-24 115.5 86 62.8
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 5.5e-24 115.5 86 62.8
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 9.3e-24 114.8 62 80.6
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 6.7e-22 108.6 101 56.4
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.8e-19 100.5 79 63.3
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 1.3e-17 94.4 216 31.0
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.7e-17 94.0 82 56.1
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 1.4e-16 90.9 196 32.1
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.9e-16 90.5 55 72.7
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 2.7e-15 86.7 171 34.5
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 3.5e-15 86.3 66 62.1
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 1.2e-10 71.2 48 68.8
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 1.5e-10 70.9 43 76.7


User provided reference genes

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