Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18548 Trifolium pratense HOM05D006910 ORTHO05D008937 3.2e-146 522.3 330 100.0
Psat6g131280 Pisum sativum HOM05D006910 ORTHO05D008937 1.6e-97 360.5 325 69.8
Medtr1g073230 Medicago truncatula HOM05D006910 ORTHO05D008937 5.5e-90 335.5 324 68.5
Ca_09799_v3 Cicer arietinum L. HOM05D006910 ORTHO05D008937 7.5e-79 298.5 333 68.5
Lj5g0027299 Lotus japonicus HOM05D006910 ORTHO05D008937 2.3e-72 276.9 343 56.9
Glyma.20G199800 Glycine max HOM05D006910 ORTHO05D008937 2.5e-66 256.9 325 57.8
Glyma.10G190700 Glycine max HOM05D006910 ORTHO05D008937 6.3e-62 242.3 322 55.9
VMungo0720G1174 Vigna mungo HOM05D006910 ORTHO05D008937 4.4e-55 219.5 332 51.2
Phvul.011G133545 Phaseolus vulgaris HOM05D006910 ORTHO05D008937 7.5e-55 218.8 335 50.7
arahy.Tifrunner.gnm1.ann1.DX8ZNF Arachis hypogaea HOM05D006910 ORTHO05D008937 1.5e-47 194.5 346 49.1
arahy.Tifrunner.gnm1.ann1.YFRU1Z Arachis hypogaea HOM05D006910 ORTHO05D008937 2.0e-47 194.1 346 48.8
Thecc.04G265400 Theobroma cacao HOM05D006910 ORTHO05D008937 1.0e-27 128.6 331 40.5
FvH4_4g04670 Fragaria vesca HOM05D006910 ORTHO05D008937 6.6e-27 125.9 327 41.6
Lalb_Chr06g0169541 Lupinus albus HOM05D006910 ORTHO05D008937 1.5e-26 124.8 266 46.2
FAN17G1396 Fragaria x ananassa HOM05D006910 ORTHO05D008937 1.9e-26 124.4 327 41.0
Manes.03G158500 Manihot esculenta HOM05D006910 ORTHO05D008937 1.9e-26 124.4 321 36.8
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 7.3e-26 122.5 340 40.9
FAN12G3461 Fragaria x ananassa HOM05D006910 ORTHO05D008937 9.6e-26 122.1 337 32.0
QL06p021124 Quercus lobata HOM05D006910 ORTHO05D008937 1.2e-25 121.7 333 38.4
Atru.chr4.1910 Acer truncatum HOM05D006910 ORTHO05D008937 4.7e-25 119.8 351 37.9
Potri.010G065400 Populus trichocarpa HOM05D006910 ORTHO05D008937 4.7e-25 119.8 313 36.1
DCAR_027350 Daucus carota HOM05D006910 ORTHO05D008937 6.2e-25 119.4 318 36.8
RcHm_v2.0_Chr4g0395481 Rosa chinensis HOM05D006910 ORTHO05D008937 8.1e-25 119.0 325 38.2
Sabra08G0131500 Salix brachista HOM05D006910 ORTHO05D008937 9.0e-24 115.5 362 31.2
Ciclev10004771m.g Citrus clementina HOM05D006910 ORTHO05D008937 2.6e-23 114.0 340 38.8
Hund20492 Selenicereus undatus HOM05D006910 ORTHO05D008937 2.6e-23 114.0 323 36.5
MD16G1226800 Malus domestica HOM05D006910 ORTHO05D008937 9.9e-23 112.1 342 37.1
CiPaw.01G177500 Carya illinoinensis HOM05D006910 ORTHO05D008937 1.7e-22 111.3 274 40.9
TWI53G1612 Tripterygium wilfordii HOM05D006910 ORTHO05D008937 2.2e-22 110.9 309 45.3
FAN22G1859 Fragaria x ananassa HOM05D006910 ORTHO05D008937 2.9e-22 110.5 349 39.0
COL.COLO4_15971 Corchorus olitorius HOM05D006910 ORTHO05D008937 3.8e-22 110.2 311 37.9
AUR62015241 Chenopodium quinoa HOM05D006910 ORTHO05D008937 1.1e-21 108.6 313 39.0
Haze_11463 Corylus avellana HOM05D006910 ORTHO05D008937 1.1e-21 108.6 357 35.0
Hma1.2p1_0112F.1_g054780 Hydrangea macrophylla HOM05D006910 ORTHO05D008937 1.9e-21 107.8 330 35.8
EL10Ac3g06675 Beta vulgaris HOM05D006910 ORTHO05D008937 2.4e-21 107.5 317 34.4
CANSAT78G1020 Cannabis sativa HOM05D006910 ORTHO05D008937 3.2e-21 107.1 307 37.8
MD13G1221900 Malus domestica HOM05D006910 ORTHO05D008937 4.2e-21 106.7 332 38.0
Sabra10G0041700 Salix brachista HOM05D006910 ORTHO05D008937 4.2e-21 106.7 290 36.9
Nitab4.5_0006344g0050 Nicotiana tabacum HOM05D006910 ORTHO05D008937 5.4e-21 106.3 344 37.2
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 9.3e-21 105.5 337 36.8
Rhsim02G0044100 Rhododendron simsii HOM05D006910 ORTHO05D008937 1.2e-20 105.1 371 37.2
PGR031G1888 Punica granatum HOM05D006910 ORTHO05D008937 1.6e-20 104.8 278 40.6
Cpa.g.sc59.4 Carica papaya HOM05D006910 ORTHO05D008937 4.6e-20 103.2 331 35.3
Duzib151G0386 Durio zibethinus HOM05D006910 ORTHO05D008937 6.0e-20 102.8 207 36.2
Gorai.011G179800 Gossypium raimondii HOM05D006910 ORTHO05D008937 7.8e-20 102.4 330 36.1
GSVIVG01027919001 Vitis vinifera HOM05D006910 ORTHO05D008937 1.0e-19 102.1 355 42.5
Actinidia39932 Actinidia chinensis HOM05D006910 ORTHO05D008937 1.7e-19 101.3 311 32.5
vmacro15481 Vaccinium macrocarpon HOM05D006910 ORTHO05D008937 1.7e-19 101.3 322 40.1
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 2.3e-19 100.9 349 29.2
Gohir.A10G107300 Gossypium hirsutum HOM05D006910 ORTHO05D008937 3.9e-19 100.1 330 36.4
Peaxi162Scf00319g00521 Petunia axillaris HOM05D006910 ORTHO05D008937 2.5e-18 97.4 346 35.0
PGR031G1691 Punica granatum HOM05D006910 ORTHO05D008937 4.3e-18 96.7 269 40.1
Lj6C621T3 Lonicera japonica HOM05D006910 ORTHO05D008937 9.6e-18 95.5 328 43.3
Potri.008G172200 Populus trichocarpa HOM05D006910 ORTHO05D008937 9.6e-18 95.5 332 31.9
Dinv29800 Davidia involucrata HOM05D006910 ORTHO05D008937 1.6e-17 94.7 244 30.3
Nitab4.5_0000355g0050 Nicotiana tabacum HOM05D006910 ORTHO05D008937 6.2e-17 92.8 341 34.0
Gohir.D10G160000 Gossypium hirsutum HOM05D006910 ORTHO05D008937 1.5e-15 88.2 333 35.4
Cc03_g06380 Coffea canephora HOM05D006910 ORTHO05D008937 2.9e-14 84.0 341 32.8
Sopen09g033910 Solanum pennellii HOM05D006910 ORTHO05D008937 4.9e-14 83.2 335 35.5
CAN.G524.13 Capsicum annuum HOM05D006910 ORTHO05D008937 1.1e-13 82.0 334 35.6
PGSC0003DMG400013458 Solanum tuberosum HOM05D006910 ORTHO05D008937 1.1e-13 82.0 340 34.1
CAN.G638.37 Capsicum annuum HOM05D006910 ORTHO05D008937 1.9e-13 81.3 335 34.3
PGSC0003DMG400001551 Solanum tuberosum HOM05D006910 ORTHO05D008937 1.9e-13 81.3 337 36.2
ClCG05G003960 Citrullus lanatus HOM05D006910 ORTHO05D008937 4.2e-13 80.1 321 27.1
Dinv27116 Davidia involucrata HOM05D006910 ORTHO05D008937 4.2e-13 80.1 340 31.2
Sopen03g001720 Solanum pennellii HOM05D006910 ORTHO05D008937 4.2e-13 80.1 334 34.7
CsaV3_3G011640 Cucumis sativus L. HOM05D006910 ORTHO05D008937 1.2e-12 78.6 317 28.7
Eucgr.H00126 Eucalyptus grandis HOM05D006910 ORTHO05D008937 1.2e-12 78.6 229 38.9
Migut.G00574 Erythranthe guttata HOM05D006910 ORTHO05D008937 1.6e-12 78.2 336 33.6
Sc13g0003110 Simmondsia chinensis HOM05D006910 ORTHO05D008937 2.7e-12 77.4 261 35.2
Thhalv10008199m.g Eutrema salsugineum HOM05D006910 ORTHO05D008937 6.0e-12 76.3 333 26.4
Solyc09g090930.3 Solanum lycopersicum HOM05D006910 ORTHO05D008937 6.0e-12 76.3 335 34.6
Ah.13g074730 Amaranthus hybridus HOM05D006910 ORTHO05D008937 1.3e-11 75.1 299 34.8
Sed0015418 Sechium edule HOM05D006910 ORTHO05D008937 2.3e-11 74.3 315 32.7
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 3.9e-11 73.6 202 30.2
Sp1g03360 Schrenkiella parvula HOM05D006910 ORTHO05D008937 3.9e-11 73.6 325 27.1
A10p02950 Brassica napus HOM05D006910 ORTHO05D008937 1.1e-10 72.0 322 25.2
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 1.5e-10 71.6 192 31.2
MELO3C006372.2 Cucumis melo HOM05D006910 ORTHO05D008937 1.3e-09 68.6 338 31.4
BraA10t42564Z Brassica rapa HOM05D006910 ORTHO05D008937 2.1e-09 67.8 314 24.2
Peaxi162Scf01044g00225 Petunia axillaris HOM05D006910 ORTHO05D008937 3.7e-09 67.0 336 32.4
Carub.0001s0374 Capsella rubella HOM05D006910 ORTHO05D008937 6.2e-09 66.2 317 25.2
Nitab4.5_0000592g0430 Nicotiana tabacum HOM05D006910 ORTHO05D008937 8.1e-09 65.9 369 24.4
BolC5t29051H Brassica oleracea HOM05D006910 ORTHO05D008937 1.8e-08 64.7 320 25.0
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 1.8e-08 64.7 177 29.4
C05p02700 Brassica napus HOM05D006910 ORTHO05D008937 5.3e-08 63.2 315 25.1
AL1G14180 Arabidopsis lyrata HOM05D006910 ORTHO05D008937 1.2e-07 62.0 317 23.7
Oeu011215.1 Olea europaea HOM05D006910 ORTHO05D008937 1.5e-07 61.6 299 41.5
AT1G04530 Arabidopsis thaliana HOM05D006910 ORTHO05D008937 2.0e-07 61.2 162 32.1
Lsat_1_v5_gn_6_66101 Lactuca sativa HOM05D006910 ORTHO05D008937 2.0e-07 61.2 157 33.1
C08p52150 Brassica napus HOM05D006910 ORTHO05D008937 5.8e-07 59.7 82 40.2
BolC8t52749H Brassica oleracea HOM05D006910 ORTHO05D008937 9.9e-07 58.9 82 40.2
Nitab4.5_0002210g0060 Nicotiana tabacum HOM05D006910 ORTHO05D008937 9.9e-07 58.9 306 24.8
PSO541G4538 Papaver somniferum HOM05D007706 ORTHO05D009593 9.9e-07 58.9 179 30.2
Actinidia37550 Actinidia chinensis HOM05D006910 ORTHO05D008937 1.3e-06 58.5 45 55.6
Aa31LG1G20340 Aethionema arabicum HOM05D006910 ORTHO05D008937 1.3e-06 58.5 163 30.7
ECA248G3309 Erigeron canadensis HOM05D006910 ORTHO05D008937 2.2e-06 57.8 191 41.9
MSTRG.4175 Avicennia marina HOM05D006910 ORTHO05D008937 2.9e-06 57.4 76 42.1
GSVIVG01028428001 Vitis vinifera HOM05D006910 ORTHO05D008937 3.8e-06 57.0 36 69.4
Migut.D00475 Erythranthe guttata HOM05D007706 ORTHO05D009593 6.4e-06 56.2 34 67.6


User provided reference genes

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