Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18525 Trifolium pratense HOM05D002833 ORTHO05D003210 6.5e-107 391.0 231 100.0
TPR.G22413 Trifolium pratense HOM05D000002 ORTHO05D000001 7.1e-45 184.9 182 55.5
Medtr1g050388 Medicago truncatula HOM05D054285 ORTHO05D003210 2.4e-32 143.3 226 42.0
Sopen00g009240 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-32 142.1 231 38.1
Sopen10g028380 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-32 142.1 231 38.1
CANSAT78G2186 Cannabis sativa HOM05D002833 ORTHO05D003210 4.5e-31 139.0 197 44.2
Ah.03g139420 Amaranthus hybridus HOM05D000002 ORTHO05D000001 6.4e-30 135.2 228 37.3
Sopen05g010840 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-30 135.2 210 39.5
ECA233G0728 Erigeron canadensis HOM05D002833 ORTHO05D003210 9.3e-21 104.8 239 31.4
TPR.G13748 Trifolium pratense HOM05D000002 ORTHO05D000001 1.2e-20 104.4 155 40.6
HanXRQChr02g0054271 Helianthus annuus HOM05D002833 ORTHO05D003210 6.0e-20 102.1 227 31.3
TPR.G15133 Trifolium pratense HOM05D000002 ORTHO05D000001 1.0e-19 101.3 92 60.9
Medtr8g074100 Medicago truncatula HOM05D002833 ORTHO05D003210 3.0e-19 99.8 115 53.0
ECA246G0311 Erigeron canadensis HOM05D002833 ORTHO05D003210 8.7e-19 98.2 239 30.1
HanXRQChr03g0061761 Helianthus annuus HOM05D002833 ORTHO05D003210 8.7e-19 98.2 237 30.8
Medtr5g044790 Medicago truncatula HOM05D002833 ORTHO05D003210 1.5e-18 97.4 176 36.4
ECA238G1436 Erigeron canadensis HOM05D002833 ORTHO05D003210 5.6e-18 95.5 182 34.1
Lalb_Chr09g0335481 Lupinus albus HOM05D002833 ORTHO05D003210 1.6e-17 94.0 71 64.8
Sopen01g011230 Solanum pennellii HOM05D000047 ORTHO05D003210 3.1e-16 89.7 81 59.3
Glyma.09G146600 Glycine max HOM05D027225 ORTHO05D003210 5.3e-16 89.0 137 40.9
Sopen12g010610 Solanum pennellii HOM05D002833 ORTHO05D019253 9.0e-16 88.2 92 48.9
Medtr8g442260 Medicago truncatula HOM05D002833 ORTHO05D003210 1.0e-14 84.7 91 46.2
VMungo0464G1997 Vigna mungo HOM05D002833 ORTHO05D003210 1.7e-14 84.0 174 36.2
AUR62019526 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.2e-14 83.6 156 34.6
ECA233G3435 Erigeron canadensis HOM05D002833 ORTHO05D003210 2.2e-14 83.6 239 25.5
AUR62023882 Chenopodium quinoa HOM05D002833 ORTHO05D003210 3.8e-14 82.8 218 28.9
ECA236G0516 Erigeron canadensis HOM05D002833 ORTHO05D003210 3.8e-14 82.8 248 26.6
HanXRQChr17g0552671 Helianthus annuus HOM05D002833 ORTHO05D003210 3.8e-14 82.8 236 26.7
Sopen01g021080 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-13 81.3 237 28.3
Sopen01g035850 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-13 81.3 237 28.3
Sopen02g003650 Solanum pennellii HOM05D002833 ORTHO05D003210 1.1e-13 81.3 237 28.3
Sopen02g020210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-13 81.3 237 28.3
Sopen03g035230 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-13 81.3 237 28.3
Sopen04g026030 Solanum pennellii HOM05D000013 ORTHO05D000011 1.1e-13 81.3 237 28.3
Sopen06g001090 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-13 81.3 237 28.3
Sopen06g016120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-13 81.3 237 28.3
Sopen06g023450 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-13 81.3 237 28.3
Sopen08g029170 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-13 81.3 237 28.3
Sopen09g028170 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-13 81.3 237 28.3
Sopen12g019720 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-13 81.3 237 28.3
AUR62001181 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.4e-13 80.9 159 34.6
HanXRQChr09g0277371 Helianthus annuus HOM05D002833 ORTHO05D003210 1.4e-13 80.9 238 29.0
Sopen06g002190 Solanum pennellii HOM05D002833 ORTHO05D019253 1.9e-13 80.5 75 54.7
ECA247G1426 Erigeron canadensis HOM05D002833 ORTHO05D003210 2.5e-13 80.1 211 29.4
ECA238G4367 Erigeron canadensis HOM05D002833 ORTHO05D003210 3.2e-13 79.7 226 30.5
Lalb_Chr13g0290791 Lupinus albus HOM05D002833 ORTHO05D003210 3.2e-13 79.7 61 65.6
ECA236G1804 Erigeron canadensis HOM05D000031 ORTHO05D000001 5.5e-13 79.0 224 26.8
HanXRQChr08g0213721 Helianthus annuus HOM05D000061 ORTHO05D003210 5.5e-13 79.0 220 26.4
PSO384G1520 Papaver somniferum HOM05D002833 ORTHO05D003210 7.1e-13 78.6 213 29.6
Sopen02g005450 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-13 78.6 61 62.3
HanXRQChr07g0189441 Helianthus annuus HOM05D002833 ORTHO05D003210 1.6e-12 77.4 245 24.5
ECA233G4286 Erigeron canadensis HOM05D000002 ORTHO05D003210 4.6e-12 75.9 208 26.9
PSO729G0013 Papaver somniferum HOM05D002833 ORTHO05D003210 4.6e-12 75.9 228 28.1
Solyc11g016945.1 Solanum lycopersicum HOM05D002833 ORTHO05D003210 1.0e-11 74.7 240 25.4
PSO349G0083 Papaver somniferum HOM05D002833 ORTHO05D003210 1.3e-11 74.3 219 27.4
PSO541G0683 Papaver somniferum HOM05D002833 ORTHO05D003210 1.3e-11 74.3 201 27.9
PSO675G8345 Papaver somniferum HOM05D002833 ORTHO05D003210 1.8e-11 73.9 228 27.6
PSO063G4800 Papaver somniferum HOM05D002833 ORTHO05D003210 2.3e-11 73.6 216 28.2
PSO384G1274 Papaver somniferum HOM05D002833 ORTHO05D003210 3.0e-11 73.2 228 27.6
PSO675G7338 Papaver somniferum HOM05D002833 ORTHO05D003210 3.0e-11 73.2 227 26.0
PSO017G0356 Papaver somniferum HOM05D002833 ORTHO05D003210 5.1e-11 72.4 216 27.8
PSO339G6159 Papaver somniferum HOM05D002833 ORTHO05D003210 5.1e-11 72.4 215 26.0
PSO423G0090 Papaver somniferum HOM05D002833 ORTHO05D003210 6.7e-11 72.0 228 27.2
PSO675G4075 Papaver somniferum HOM05D002833 ORTHO05D003210 3.3e-10 69.7 227 24.7
PSO782G2949 Papaver somniferum HOM05D002833 ORTHO05D003210 3.3e-10 69.7 216 27.8
Sopen02g025690 Solanum pennellii HOM05D002833 ORTHO05D003210 4.3e-10 69.3 58 56.9
Sopen11g021960 Solanum pennellii HOM05D002833 ORTHO05D003210 4.3e-10 69.3 126 33.3
Sopen10g012450 Solanum pennellii HOM05D000006 ORTHO05D000001 5.7e-10 68.9 156 34.0
PSO782G3831 Papaver somniferum HOM05D002833 ORTHO05D003210 7.4e-10 68.6 214 25.2
PSO541G4229 Papaver somniferum HOM05D002833 ORTHO05D003210 9.7e-10 68.2 222 24.8
ECA238G2166 Erigeron canadensis HOM05D002833 ORTHO05D003210 1.6e-09 67.4 83 37.3
PSO017G2161 Papaver somniferum HOM05D002833 ORTHO05D003210 1.6e-09 67.4 201 28.4
PSO017G4031 Papaver somniferum HOM05D002833 ORTHO05D003210 1.6e-09 67.4 216 26.9
PSO063G3721 Papaver somniferum HOM05D002833 ORTHO05D003210 1.6e-09 67.4 215 24.2
PSO541G3398 Papaver somniferum HOM05D002833 ORTHO05D003210 2.2e-09 67.0 216 25.9
PSO210G2412 Papaver somniferum HOM05D002833 ORTHO05D003210 4.8e-09 65.9 200 27.0
AUR62009244 Chenopodium quinoa HOM05D002833 ORTHO05D003210 8.2e-09 65.1 73 43.8
PSO170G2323 Papaver somniferum HOM05D002833 ORTHO05D003210 8.2e-09 65.1 200 27.0
PSO210G5263 Papaver somniferum HOM05D002833 ORTHO05D003210 8.2e-09 65.1 200 26.5
AL431U10010 Arabidopsis lyrata HOM05D002833 ORTHO05D003210 1.1e-08 64.7 164 29.3
ECA246G3983 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-08 64.7 83 36.1
PSO151G0172 Papaver somniferum HOM05D002833 ORTHO05D003210 1.4e-08 64.3 189 26.5
AUR62029166 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.8e-08 63.9 159 26.4
THA.LOC109116961 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 1.8e-08 63.9 214 23.4
Sp3g24750 Schrenkiella parvula HOM05D002833 ORTHO05D003210 2.4e-08 63.5 137 26.3
TPR.G40622 Trifolium pratense HOM05D002833 ORTHO05D003210 3.1e-08 63.2 56 53.6
VMungo0331G0694 Vigna mungo HOM05D001474 ORTHO05D001461 3.1e-08 63.2 55 49.1
Ah.05g172100 Amaranthus hybridus HOM05D002833 ORTHO05D003210 4.1e-08 62.8 56 42.9
ECA236G2468 Erigeron canadensis HOM05D002833 ORTHO05D003210 4.1e-08 62.8 51 58.8
PSO782G0726 Papaver somniferum HOM05D002833 ORTHO05D003210 4.1e-08 62.8 75 38.7
TPR.G20429 Trifolium pratense HOM05D027225 ORTHO05D003210 4.1e-08 62.8 172 30.8
PSO210G6292 Papaver somniferum HOM05D002833 ORTHO05D003210 6.9e-08 62.0 194 27.3
PSO732G0723 Papaver somniferum HOM05D002833 ORTHO05D003210 1.2e-07 61.2 91 35.2
ECA233G2682 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-07 60.8 83 37.3
HanXRQChr17g0542971 Helianthus annuus HOM05D002833 ORTHO05D003210 1.5e-07 60.8 68 41.2
Peaxi162Scf00023g01122 Petunia axillaris HOM05D010760 ORTHO05D000001 1.5e-07 60.8 207 29.5
EL10Ac1g02212 Beta vulgaris HOM05D002833 ORTHO05D003210 2.0e-07 60.5 72 45.8
ECA248G3833 Erigeron canadensis HOM05D002833 ORTHO05D003210 2.0e-07 60.5 192 24.5
PSO541G3964 Papaver somniferum HOM05D002833 ORTHO05D003210 2.0e-07 60.5 201 26.9
PSO700G0004 Papaver somniferum HOM05D002833 ORTHO05D003210 2.0e-07 60.5 214 24.8
PSO104G0123 Papaver somniferum HOM05D002833 ORTHO05D003210 2.6e-07 60.1 227 26.4
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 3.4e-07 59.7 65 46.2
Sp1g32450 Schrenkiella parvula HOM05D002833 ORTHO05D003210 4.5e-07 59.3 197 22.3
ECA246G0664 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.9e-07 58.9 72 36.1
ECA246G4759 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.9e-07 58.9 81 38.3
AT5G48050 Arabidopsis thaliana HOM05D002833 ORTHO05D003210 7.7e-07 58.5 213 26.8
AUR62021616 Chenopodium quinoa HOM05D021338 ORTHO05D003210 7.7e-07 58.5 173 27.2
TPR.G554 Trifolium pratense HOM05D002753 ORTHO05D003210 7.7e-07 58.5 64 50.0
ECA238G3697 Erigeron canadensis HOM05D000214 ORTHO05D003210 1.0e-06 58.2 81 39.5
AUR62034558 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.3e-06 57.8 73 37.0
AUR62043089 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.7e-06 57.4 75 33.3
HanXRQChr03g0093111 Helianthus annuus HOM05D000002 ORTHO05D000001 1.7e-06 57.4 218 24.8
PSO384G1482 Papaver somniferum HOM05D002833 ORTHO05D003210 1.7e-06 57.4 63 42.9
PSO675G0475 Papaver somniferum HOM05D002833 ORTHO05D003210 1.7e-06 57.4 63 42.9
PSO675G9166 Papaver somniferum HOM05D002833 ORTHO05D003210 1.7e-06 57.4 201 24.4
Solyc02g061920.2 Solanum lycopersicum HOM05D002833 ORTHO05D003210 1.7e-06 57.4 50 56.0
AUR62024857 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.2e-06 57.0 57 38.6
Medtr2g095090 Medicago truncatula HOM05D002833 ORTHO05D003210 2.2e-06 57.0 51 56.9
Nitab4.5_0009589g0010 Nicotiana tabacum HOM05D010760 ORTHO05D003210 2.2e-06 57.0 82 40.2
PSO339G5536 Papaver somniferum HOM05D002833 ORTHO05D003210 2.2e-06 57.0 75 37.3
AUR62033479 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.9e-06 56.6 57 38.6
Medtr7g015400 Medicago truncatula HOM05D039659 ORTHO05D003210 2.9e-06 56.6 52 51.9
PSO063G2619 Papaver somniferum HOM05D002833 ORTHO05D003210 2.9e-06 56.6 75 36.0
PSO675G6366 Papaver somniferum HOM05D002833 ORTHO05D003210 2.9e-06 56.6 234 24.8
THA.LOC109116533 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 2.9e-06 56.6 149 28.9
AUR62039580 Chenopodium quinoa HOM05D002833 ORTHO05D003210 3.8e-06 56.2 55 38.2
PSO063G6615 Papaver somniferum HOM05D002833 ORTHO05D003210 3.8e-06 56.2 69 44.9
PSO170G1611 Papaver somniferum HOM05D002833 ORTHO05D003210 3.8e-06 56.2 75 36.0
PSO384G4886 Papaver somniferum HOM05D002833 ORTHO05D003210 3.8e-06 56.2 64 40.6
HanXRQChr14g0440681 Helianthus annuus HOM05D000002 ORTHO05D000001 6.5e-06 55.5 72 47.2
HanXRQChr14g0457091 Helianthus annuus HOM05D000002 ORTHO05D000001 6.5e-06 55.5 72 47.2
PSO135G1061 Papaver somniferum HOM05D002833 ORTHO05D003210 6.5e-06 55.5 76 36.8
Ah.08g221250 Amaranthus hybridus HOM05D002833 ORTHO05D003210 8.5e-06 55.1 79 34.2
Nitab4.5_0003362g0070 Nicotiana tabacum HOM05D002833 ORTHO05D000001 8.5e-06 55.1 239 25.5
PSO170G0231 Papaver somniferum HOM05D002833 ORTHO05D003210 8.5e-06 55.1 84 34.5
PSO303G0001 Papaver somniferum HOM05D002833 ORTHO05D003210 8.5e-06 55.1 66 45.5
PSO384G3504 Papaver somniferum HOM05D002833 ORTHO05D003210 8.5e-06 55.1 63 41.3
PSO675G8443 Papaver somniferum HOM05D002833 ORTHO05D003210 8.5e-06 55.1 68 33.8
PSO732G0384 Papaver somniferum HOM05D002833 ORTHO05D003210 8.5e-06 55.1 61 45.9


User provided reference genes

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