Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18483 Trifolium pratense HOM05D010448 ORTHO05D012537 3.3e-211 738.0 350 100.0
Medtr3g064460 Medicago truncatula HOM05D010448 ORTHO05D012537 1.4e-153 546.6 351 75.5
Psat5g142640 Pisum sativum HOM05D010448 ORTHO05D012537 8.0e-141 504.2 349 70.8
Lj6g0025570 Lotus japonicus HOM05D010448 ORTHO05D012537 1.6e-120 436.8 350 62.6
Lalb_Chr18g0053761 Lupinus albus HOM05D010448 ORTHO05D012537 1.4e-116 423.7 352 63.4
Glyma.18G044800 Glycine max HOM05D010448 ORTHO05D012537 3.9e-111 405.6 348 59.5
Glyma.11G210008 Glycine max HOM05D010448 ORTHO05D012537 1.2e-109 400.6 348 59.8
arahy.Tifrunner.gnm1.ann1.4R5R47 Arachis hypogaea HOM05D010448 ORTHO05D012537 1.8e-108 396.7 341 59.5
VMungo0540G1047 Vigna mungo HOM05D010448 ORTHO05D012537 9.2e-105 384.4 351 57.5
Phvul.006G086200 Phaseolus vulgaris HOM05D010448 ORTHO05D012537 3.0e-103 379.4 352 57.4
Potri.001G181000 Populus trichocarpa HOM05D010448 ORTHO05D012537 1.9e-73 280.4 360 44.4
Potri.001G146000 Populus trichocarpa HOM05D010448 ORTHO05D012537 4.6e-72 275.8 359 42.3
Sabra01G0146000 Salix brachista HOM05D010448 ORTHO05D012537 1.0e-71 274.6 362 43.6
Sabra01G0114700 Salix brachista HOM05D010448 ORTHO05D012537 3.1e-68 263.1 358 41.9
Manes.18G108700 Manihot esculenta HOM05D010448 ORTHO05D012537 3.8e-66 256.1 352 40.9
Atru.chr6.2743 Acer truncatum HOM05D010448 ORTHO05D012537 4.2e-57 226.1 366 36.3
Ciclev10015844m.g Citrus clementina HOM05D010448 ORTHO05D012537 7.7e-51 205.3 306 38.2
Eucgr.G01906 Eucalyptus grandis HOM05D010448 ORTHO05D012537 7.4e-46 188.7 347 34.6
MBI07_g31506_MAGBIO Magnolia biondii HOM05D010448 ORTHO05D012537 1.2e-14 85.1 310 27.1
Atru.chr13.2066 Acer truncatum HOM05D010448 ORTHO05D012537 9.8e-14 82.0 113 34.5
Cc02_g04650 Coffea canephora HOM05D000664 ORTHO05D000491 1.6e-11 74.7 285 24.9
COL.COLO4_26298 Corchorus olitorius HOM05D015450 ORTHO05D017757 5.9e-11 72.8 230 26.1
Manes.09G072126 Manihot esculenta HOM05D008040 ORTHO05D010075 7.8e-11 72.4 271 26.2
Dinv23189 Davidia involucrata HOM05D000571 ORTHO05D000435 5.0e-10 69.7 296 26.0
Nn5g30450 Nelumbo nucifera HOM05D000664 ORTHO05D000491 1.1e-09 68.6 285 22.5
COL.COLO4_29637 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.9e-09 67.8 274 22.6
MBI01_g31985_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 2.5e-09 67.4 317 23.3
CAN.G231.32 Capsicum annuum HOM05D000664 ORTHO05D000491 7.3e-09 65.9 173 30.1
Oeu009732.1 Olea europaea HOM05D001586 ORTHO05D001543 1.2e-08 65.1 279 26.5
PSO675G1828 Papaver somniferum HOM05D000664 ORTHO05D000491 2.1e-08 64.3 311 23.8
Rhsim10G0101800 Rhododendron simsii HOM05D015241 ORTHO05D020831 2.1e-08 64.3 225 28.4
Oeu009728.1 Olea europaea HOM05D008040 ORTHO05D010075 2.8e-08 63.9 275 24.4
AL6G17920 Arabidopsis lyrata HOM05D000664 ORTHO05D000491 3.6e-08 63.5 282 22.3
Duzib205G1254 Durio zibethinus HOM05D000664 ORTHO05D000491 3.6e-08 63.5 292 23.3
Lj5P697T4 Lonicera japonica HOM05D000664 ORTHO05D000491 6.1e-08 62.8 298 24.2
PSO144G0087 Papaver somniferum HOM05D000664 ORTHO05D000491 6.1e-08 62.8 182 24.7
DCAR_018084 Daucus carota HOM05D000664 ORTHO05D000491 8.0e-08 62.4 303 23.4
Rhsim07G0240200 Rhododendron simsii HOM05D015450 ORTHO05D017757 1.0e-07 62.0 315 22.9
Thecc.03G149600 Theobroma cacao HOM05D000664 ORTHO05D000491 1.0e-07 62.0 288 22.6
Migut.F01251 Erythranthe guttata HOM05D000664 ORTHO05D000491 2.3e-07 60.8 299 22.7
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 4.0e-07 60.1 293 26.6
Migut.F01252 Erythranthe guttata HOM05D000664 ORTHO05D000491 4.0e-07 60.1 293 23.2
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 5.2e-07 59.7 163 33.7
Lj2A1107G68 Lonicera japonica HOM05D001729 ORTHO05D001155 5.2e-07 59.7 226 28.8
arahy.Tifrunner.gnm1.ann1.6LG1IJ Arachis hypogaea HOM05D002420 ORTHO05D002422 6.8e-07 59.3 313 23.3
arahy.Tifrunner.gnm1.ann1.XHBX5X Arachis hypogaea HOM05D002420 ORTHO05D002422 6.8e-07 59.3 312 24.7
CAN.G1631.2 Capsicum annuum HOM05D008697 ORTHO05D010866 6.8e-07 59.3 178 31.5
QL04p045359 Quercus lobata HOM05D000007 ORTHO05D000039 6.8e-07 59.3 199 25.1
HanXRQChr04g0121411 Helianthus annuus HOM05D001729 ORTHO05D001155 8.9e-07 58.9 220 28.2
Hund15878 Selenicereus undatus HOM05D001729 ORTHO05D001155 8.9e-07 58.9 287 25.8
Duzib177G1156 Durio zibethinus HOM05D000664 ORTHO05D000491 1.2e-06 58.5 216 26.4
Lsat_1_v5_gn_5_31100 Lactuca sativa HOM05D001729 ORTHO05D001155 1.5e-06 58.2 287 25.1
Nitab4.5_0003309g0040 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.5e-06 58.2 157 29.3
Sabra15G0014700 Salix brachista HOM05D001729 ORTHO05D001155 2.0e-06 57.8 276 24.6
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 2.6e-06 57.4 163 31.9
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 7.5e-06 55.8 216 27.3
COL.COLO4_31563 Corchorus olitorius HOM05D008040 ORTHO05D010075 7.5e-06 55.8 170 31.2
ECA234G1960 Erigeron canadensis HOM05D000007 ORTHO05D000017 7.5e-06 55.8 143 26.6
CAN.G1631.3 Capsicum annuum HOM05D008697 ORTHO05D010866 9.8e-06 55.5 162 30.9
Lj2A946T25 Lonicera japonica HOM05D001729 ORTHO05D001155 9.8e-06 55.5 215 29.3
Rhsim10G0102000 Rhododendron simsii HOM05D015241 ORTHO05D020831 9.8e-06 55.5 170 28.8


User provided reference genes

Program Settings