Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 2.0e-43 178.7 92 100.0
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 2.8e-37 158.3 92 89.1
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 2.0e-30 135.6 92 80.4
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 5.9e-27 124.0 90 73.3
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 3.2e-25 118.2 89 67.4
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 6.1e-24 114.0 92 65.2
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 2.8e-21 105.1 93 59.1
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 3.7e-21 104.8 92 63.0
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 4.8e-21 104.4 91 67.0
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 2.4e-20 102.1 93 59.1
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 2.4e-20 102.1 91 61.5
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 5.4e-20 100.9 93 58.1
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 2.7e-19 98.6 93 57.0
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 3.5e-19 98.2 90 60.0
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 5.9e-19 97.4 92 54.3
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 1.7e-18 95.9 90 64.4
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 1.7e-18 95.9 93 57.0
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.7e-18 95.9 92 58.7
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 2.9e-18 95.1 90 58.9
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 2.9e-18 95.1 95 57.9
FAN20G2766 Fragaria x ananassa HOM05D006691 ORTHO05D007620 6.5e-18 94.0 95 54.7
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 1.9e-17 92.4 89 62.9
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 1.9e-17 92.4 95 55.8
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.9e-17 92.4 95 54.7
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.9e-17 92.4 95 55.8
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 1.9e-17 92.4 93 55.9
Glyma.12G235600 Glycine max HOM05D006691 ORTHO05D007620 2.5e-17 92.0 69 66.7
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 3.2e-17 91.7 95 54.7
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 5.5e-17 90.9 93 52.7
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 7.2e-17 90.5 93 55.9
Manes.11G091700 Manihot esculenta HOM05D006691 ORTHO05D007620 9.5e-17 90.1 91 54.9
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 9.5e-17 90.1 90 56.7
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 2.8e-16 88.6 92 55.4
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 2.8e-16 88.6 96 50.0
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 3.6e-16 88.2 92 53.3
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 4.7e-16 87.8 95 51.6
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 4.7e-16 87.8 93 55.9
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 6.1e-16 87.4 93 55.9
Manes.04G087299 Manihot esculenta HOM05D006691 ORTHO05D007620 6.1e-16 87.4 91 56.0
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 8.0e-16 87.0 92 55.4
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 8.0e-16 87.0 93 50.5
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.4e-15 86.3 88 54.5
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 1.8e-15 85.9 90 54.4
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 2.3e-15 85.5 86 55.8
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 2.3e-15 85.5 89 56.2
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 2.3e-15 85.5 101 54.5
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 2.3e-15 85.5 91 56.0
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 6.8e-15 84.0 89 50.6
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 6.8e-15 84.0 92 50.0
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 8.8e-15 83.6 101 53.5
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.2e-14 83.2 89 55.1
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 2.0e-14 82.4 89 49.4
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 2.0e-14 82.4 97 48.5
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 2.6e-14 82.0 89 53.9
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 7.5e-14 80.5 89 49.4
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea HOM05D006691 ORTHO05D007620 9.8e-14 80.1 46 80.4
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 2.2e-13 79.0 95 48.4
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 2.8e-13 78.6 92 52.2
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 3.7e-13 78.2 93 47.3
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 3.7e-13 78.2 89 49.4
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 3.7e-13 78.2 92 44.6
MELO3C023320.2 Cucumis melo HOM05D006691 ORTHO05D007620 3.1e-12 75.1 91 49.5
Rhsim05G0071400 Rhododendron simsii HOM05D006691 ORTHO05D007620 5.4e-12 74.3 91 47.3
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 5.4e-12 74.3 97 50.5
HanXRQChr04g0127791 Helianthus annuus HOM05D006691 ORTHO05D007620 7.0e-12 73.9 88 48.9
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 9.2e-12 73.6 91 52.7
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 9.2e-12 73.6 87 47.1
CANSAT11G0932 Cannabis sativa HOM05D006691 ORTHO05D007620 1.2e-11 73.2 87 47.1
MBI16_g36843_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 2.7e-11 72.0 93 41.9
Peaxi162Scf00684g00234 Petunia axillaris HOM05D006691 ORTHO05D007620 2.7e-11 72.0 89 50.6
Lsat_1_v5_gn_7_91560 Lactuca sativa HOM05D006691 ORTHO05D007620 3.5e-11 71.6 88 51.1
AT2G16385 Arabidopsis thaliana HOM05D006691 ORTHO05D007620 5.9e-11 70.9 92 45.7
Hund06253 Selenicereus undatus HOM05D006691 ORTHO05D007620 5.9e-11 70.9 94 44.7
arahy.Tifrunner.gnm1.ann1.GKZX65 Arachis hypogaea HOM05D006691 ORTHO05D007620 7.8e-11 70.5 98 49.0
CSS0004191 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 7.8e-11 70.5 92 51.1
HanXRQChr16g0505401 Helianthus annuus HOM05D006691 ORTHO05D007620 1.0e-10 70.1 92 46.7
Carub.0007s0568 Capsella rubella HOM05D006691 ORTHO05D007620 2.3e-10 68.9 87 49.4
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 2.9e-10 68.6 90 45.6
Glyma.06G010000 Glycine max HOM05D006691 ORTHO05D007620 8.6e-10 67.0 90 46.7
arahy.Tifrunner.gnm1.ann1.JP7MPK Arachis hypogaea HOM05D006691 ORTHO05D007620 1.5e-09 66.2 95 49.5
AL3G52540 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 1.9e-09 65.9 89 43.8
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 2.5e-09 65.5 91 49.5
Glyma.08G235100 Glycine max HOM05D006691 ORTHO05D007620 2.5e-09 65.5 90 46.7
CiPaw.05G069300 Carya illinoinensis HOM05D006691 ORTHO05D007620 3.3e-09 65.1 37 73.0
CiPaw.05G069400 Carya illinoinensis HOM05D006691 ORTHO05D007620 3.3e-09 65.1 37 73.0
CSS0048821 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 5.6e-09 64.3 99 44.4
CARHR242800 Cardamine hirsuta HOM05D006691 ORTHO05D007620 5.6e-09 64.3 87 46.0
CiPaw.05G069100 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.6e-08 62.8 37 73.0
AL7G16600 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 2.8e-08 62.0 87 46.0
Thhalv10026702m.g Eutrema salsugineum HOM05D006691 ORTHO05D007620 2.8e-08 62.0 87 46.0
Lalb_Chr03g0032901 Lupinus albus HOM05D006691 ORTHO05D007620 6.1e-08 60.8 40 67.5
PGR042G3893 Punica granatum HOM05D006691 ORTHO05D007620 6.1e-08 60.8 97 45.4
A03p63030 Brassica napus HOM05D006691 ORTHO05D007620 8.0e-08 60.5 87 42.5
BraA03t15377Z Brassica rapa HOM05D006691 ORTHO05D007620 8.0e-08 60.5 87 42.5
MBI10_g00752_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 1.4e-07 59.7 45 55.6
C07p60660 Brassica napus HOM05D006691 ORTHO05D007620 1.8e-07 59.3 87 41.4
BolC7t46496H Brassica oleracea HOM05D006691 ORTHO05D007620 1.8e-07 59.3 87 41.4
HPP92_017191 Vanilla planifolia HOM05D006691 ORTHO05D007620 1.8e-07 59.3 79 45.6
Sc18g0005100 Simmondsia chinensis HOM05D006691 ORTHO05D007620 4.0e-07 58.2 96 37.5
BcaB03g11823 Brassica carinata HOM05D006691 ORTHO05D007620 5.2e-07 57.8 87 42.5
BcaNung04921 Brassica carinata HOM05D006691 ORTHO05D007620 1.2e-06 56.6 87 44.8
A01p03880 Brassica napus HOM05D006691 ORTHO05D007620 1.2e-06 56.6 89 44.9
Carub.0003s3015 Capsella rubella HOM05D006691 ORTHO05D007620 1.2e-06 56.6 82 43.9
BcaNung00683 Brassica carinata HOM05D006691 ORTHO05D007620 1.5e-06 56.2 89 44.9
C01p04190 Brassica napus HOM05D006691 ORTHO05D007620 1.5e-06 56.2 89 44.9
DCAR_004781 Daucus carota HOM05D006691 ORTHO05D007620 1.5e-06 56.2 58 48.3
BraA01t00375Z Brassica rapa HOM05D006691 ORTHO05D007620 2.0e-06 55.8 89 44.9
Sp7g32390 Schrenkiella parvula HOM05D006691 ORTHO05D007620 2.0e-06 55.8 73 43.8
Eucgr.G01694 Eucalyptus grandis HOM05D006691 ORTHO05D007620 5.7e-06 54.3 103 38.8
BcaC01g00889 Brassica carinata HOM05D006691 ORTHO05D007620 9.8e-06 53.5 87 41.4
Os11g0323860 Oryza sativa ssp. japonica HOM05D035858 ORTHO05D007620 9.8e-06 53.5 33 69.7
Os11g0412484 Oryza sativa ssp. japonica HOM05D035858 ORTHO05D007620 9.8e-06 53.5 33 69.7


User provided reference genes

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