Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 4.5e-121 438.0 224 100.0
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 6.2e-70 268.1 235 63.8
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 1.5e-55 220.3 235 54.5
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 2.5e-55 219.5 234 52.1
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 3.0e-48 196.1 234 48.7
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 4.3e-47 192.2 234 49.1
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 4.8e-46 188.7 234 48.7
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 4.2e-42 175.6 231 46.3
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 2.7e-41 172.9 225 46.2
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 7.9e-41 171.4 234 45.3
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 2.4e-37 159.8 230 43.5
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 1.5e-36 157.1 236 44.1
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 3.5e-33 146.0 206 44.2
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 3.5e-33 146.0 206 44.2
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 6.0e-33 145.2 122 63.1
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 2.3e-32 143.3 206 43.2
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 5.6e-31 138.7 128 58.6
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 1.3e-30 137.5 132 54.5
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 3.8e-27 125.9 128 52.3
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 3.8e-27 125.9 132 50.8
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 9.3e-26 121.3 132 49.2
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 1.2e-25 120.9 129 49.6
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 4.6e-25 119.0 128 49.2
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 4.6e-25 119.0 128 50.8
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 1.8e-24 117.1 132 47.0
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 6.7e-24 115.2 128 49.2
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 1.1e-23 114.4 124 51.6
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 1.5e-23 114.0 128 46.9
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 1.9e-23 113.6 127 46.5
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 1.9e-23 113.6 127 46.5
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 3.3e-23 112.8 128 48.4
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 3.3e-23 112.8 128 46.1
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 3.3e-23 112.8 127 47.2
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 5.7e-23 112.1 127 45.7
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 9.6e-23 111.3 128 46.9
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.3e-22 110.9 118 46.6
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 1.6e-22 110.5 128 45.3
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 2.1e-22 110.2 126 50.0
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 2.8e-22 109.8 193 35.8
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 1.4e-21 107.5 128 47.7
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 3.1e-21 106.3 124 46.8
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 4.1e-21 105.9 126 46.8
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 4.1e-21 105.9 128 48.4
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 4.1e-21 105.9 128 48.4
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 6.9e-21 105.1 128 48.4
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 9.0e-21 104.8 128 47.7
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.6e-20 103.2 128 47.7
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 4.5e-20 102.4 163 37.4
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.7e-19 100.5 127 47.2
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 2.9e-19 99.8 119 47.1
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 3.8e-19 99.4 128 43.8
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 6.5e-19 98.6 120 46.7
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 6.5e-19 98.6 161 36.6
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 2.1e-17 93.6 122 45.1
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 1.0e-16 91.3 125 42.4
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 5.1e-16 89.0 115 47.0
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 5.1e-16 89.0 171 32.7
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 5.1e-16 89.0 129 40.3
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 1.9e-15 87.0 117 41.9
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 2.5e-15 86.7 114 46.5
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 9.7e-15 84.7 120 40.0
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 9.7e-15 84.7 118 40.7
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 1.3e-14 84.3 131 37.4
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 1.3e-14 84.3 121 41.3
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 1.6e-14 84.0 118 40.7
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 2.2e-14 83.6 128 35.9
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 2.8e-14 83.2 132 40.2
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 2.8e-14 83.2 128 36.7
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 2.8e-14 83.2 96 44.8
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 4.8e-14 82.4 115 44.3
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 4.8e-14 82.4 115 44.3
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 6.3e-14 82.0 159 34.0
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 8.2e-14 81.6 129 36.4
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 1.4e-13 80.9 115 41.7
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 1.4e-13 80.9 129 38.0
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 2.4e-13 80.1 117 37.6
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 2.4e-13 80.1 121 42.1
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 9.0e-13 78.2 115 40.9
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 9.0e-13 78.2 159 33.3
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 9.0e-13 78.2 118 39.0
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 1.2e-12 77.8 115 40.9
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 1.2e-12 77.8 130 40.0
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 1.5e-12 77.4 120 39.2
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 1.5e-12 77.4 118 37.3
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 1.5e-12 77.4 129 35.7
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.0e-12 77.0 118 39.8
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 2.6e-12 76.6 115 39.1
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 5.9e-12 75.5 129 36.4
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 7.7e-12 75.1 121 38.8
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 1.0e-11 74.7 120 39.2
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 1.3e-11 74.3 114 40.4
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 1.4e-10 70.9 118 38.1
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 3.6e-09 66.2 115 40.0
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 2.3e-08 63.5 124 33.9
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 5.1e-08 62.4 170 28.8
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 5.1e-08 62.4 117 35.0
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 1.7e-06 57.4 172 29.1
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 2.2e-06 57.0 121 30.6
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 6.3e-06 55.5 118 34.7


User provided reference genes

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