Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18389 Trifolium pratense HOM05D006190 ORTHO05D008260 1.9e-121 439.1 210 100.0
Psat5g111200 Pisum sativum HOM05D006190 ORTHO05D008260 3.8e-106 388.3 209 90.0
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 2.5e-105 385.6 209 87.6
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 1.8e-95 352.8 203 82.3
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 5.4e-92 341.3 209 78.0
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 1.2e-91 340.1 207 79.2
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 1.6e-91 339.7 209 77.5
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 1.6e-91 339.7 208 76.4
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 2.7e-91 339.0 208 76.4
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 5.6e-89 331.3 204 77.0
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 2.2e-85 319.3 207 69.6
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 3.7e-85 318.5 204 72.1
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 2.4e-84 315.8 207 70.0
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 2.4e-84 315.8 207 70.0
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 3.2e-84 315.5 206 68.9
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 2.7e-83 312.4 203 71.9
Lj1A781G46 Lonicera japonica HOM05D006190 ORTHO05D008260 1.0e-82 310.5 207 68.6
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 1.3e-82 310.1 210 69.0
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 1.3e-82 310.1 210 69.0
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 2.3e-82 309.3 210 69.0
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 3.0e-82 308.9 207 68.6
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 3.9e-82 308.5 207 69.1
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 1.1e-81 307.0 167 87.4
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 1.5e-81 306.6 204 70.1
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 1.5e-81 306.6 204 68.1
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 3.3e-81 305.4 207 68.1
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 5.6e-81 304.7 207 67.1
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 1.2e-80 303.5 203 70.9
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 3.6e-80 302.0 207 67.1
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 6.2e-80 301.2 202 67.3
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 1.1e-79 300.4 207 66.2
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.1e-79 300.4 204 66.7
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 1.8e-79 299.7 203 69.0
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 1.8e-79 299.7 203 69.0
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 3.1e-79 298.9 203 67.5
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 3.1e-79 298.9 203 67.5
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 3.1e-79 298.9 202 65.8
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 5.2e-79 298.1 204 66.7
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 1.5e-78 296.6 209 65.6
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 1.5e-78 296.6 208 68.3
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 1.5e-78 296.6 223 62.8
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 3.4e-78 295.4 207 66.2
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 5.8e-78 294.7 206 66.0
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 5.8e-78 294.7 208 66.8
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 9.8e-78 293.9 204 66.2
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 9.8e-78 293.9 204 68.1
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 9.8e-78 293.9 207 65.7
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 4.9e-77 291.6 204 66.2
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 6.4e-77 291.2 202 64.4
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 8.3e-77 290.8 202 64.4
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 1.1e-76 290.4 202 64.4
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 1.4e-76 290.0 207 63.8
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 1.4e-76 290.0 202 64.9
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 9.2e-76 287.3 208 68.3
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 1.6e-75 286.6 202 64.4
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 2.7e-75 285.8 208 64.9
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 4.6e-75 285.0 207 61.4
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 6.0e-75 284.6 207 63.3
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 3.0e-74 282.3 203 66.0
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 5.1e-74 281.6 202 62.9
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 6.6e-74 281.2 207 60.4
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 7.3e-73 277.7 208 65.4
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 6.2e-72 274.6 207 61.4
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.1e-71 273.9 204 63.2
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 4.4e-70 268.5 202 63.4
Eucgr.A01784 Eucalyptus grandis HOM05D006190 ORTHO05D008260 9.9e-70 267.3 203 62.6
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.3e-69 266.9 255 52.5
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 1.4e-68 263.5 178 67.4
Os09g0296400 Oryza sativa ssp. japonica HOM05D006190 ORTHO05D008260 4.1e-68 261.9 207 60.9
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 7.1e-68 261.2 167 73.1
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 2.1e-67 259.6 210 57.6
CDE07G0814 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 1.7e-66 256.5 205 57.6
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 3.0e-66 255.8 167 69.5
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 3.9e-66 255.4 167 69.5
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 3.9e-66 255.4 167 69.5
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 7.3e-65 251.1 167 67.1
SEGI_33791 Sequoiadendron giganteum HOM05D006190 ORTHO05D008260 1.6e-64 250.0 202 58.9
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 4.7e-64 248.4 167 68.9
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 5.2e-63 245.0 167 67.7
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 2.0e-62 243.0 167 65.9
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 2.7e-59 232.6 170 64.1
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 4.6e-59 231.9 200 57.0
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 6.0e-59 231.5 168 64.9
unitig_46.g18456 Utricularia gibba HOM05D006190 ORTHO05D008260 1.9e-57 226.5 238 50.0
SGA_v2.0_scaffold13G06447 Striga asiatica HOM05D006190 ORTHO05D008260 4.8e-56 221.9 167 61.7
Oeu015049.1 Olea europaea HOM05D006190 ORTHO05D008260 5.8e-54 214.9 153 66.7
Mapoly0014s0084 Marchantia polymorpha HOM05D006190 ORTHO05D008260 2.9e-53 212.6 203 47.8
Zm00001eb309080 Zea mays HOM05D006190 ORTHO05D008260 4.9e-53 211.8 169 59.8
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 2.4e-52 209.5 233 49.8
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 7.1e-52 208.0 185 54.6
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 7.1e-52 208.0 144 66.0
Pp3c23_22000 Physcomitrium patens HOM05D006190 ORTHO05D008260 1.3e-50 203.8 201 47.3
Aa31sc34G90 Aethionema arabicum HOM05D006190 ORTHO05D008260 1.1e-49 200.7 144 61.8
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 2.4e-47 193.0 122 72.1
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 3.1e-47 192.6 131 66.4
SHI10056 Sapria himalayana HOM05D006190 ORTHO05D008260 3.1e-47 192.6 143 62.9
TPR.G36458 Trifolium pratense HOM05D006190 ORTHO05D008260 1.2e-46 190.7 143 70.6
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 1.6e-43 180.3 121 66.1
BcaC01g05972 Brassica carinata HOM05D006190 ORTHO05D008260 6.2e-40 168.3 167 52.7
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 5.5e-36 155.2 169 48.5
Lsat_1_v5_gn_5_72540 Lactuca sativa HOM05D006190 ORTHO05D008260 7.6e-30 134.8 97 62.9
QL08p030629 Quercus lobata HOM05D006190 ORTHO05D027094 3.8e-29 132.5 86 72.1
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 4.6e-27 125.6 164 43.3
C03p20570 Brassica napus HOM05D006190 ORTHO05D008260 3.0e-26 122.9 147 46.3
CBR_g25881 Chara braunii HOM05D006190 ORTHO05D008260 3.9e-26 122.5 143 42.7
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 7.9e-19 98.2 47 97.9
Hund15364 Selenicereus undatus HOM05D006190 ORTHO05D027094 3.4e-14 82.8 50 76.0
BcaC02g11231 Brassica carinata HOM05D006190 ORTHO05D027094 5.1e-10 68.9 41 73.2
Lsat_1_v5_gn_1_125520 Lactuca sativa HOM05D006190 ORTHO05D008260 7.4e-09 65.1 56 53.6


User provided reference genes

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