Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18361 Trifolium pratense HOM05D008291 ORTHO05D036769 1.7e-31 138.7 68 100.0
TPR.G34585 Trifolium pratense HOM05D000107 ORTHO05D000062 3.7e-26 120.9 85 76.5
Lj1g0021760 Lotus japonicus HOM05D008291 ORTHO05D003568 6.5e-15 83.6 86 52.3
TPR.G15331 Trifolium pratense HOM05D000044 ORTHO05D002853 1.5e-11 72.4 35 88.6
Solyc12g038430.3 Solanum lycopersicum HOM05D008291 ORTHO05D012653 2.8e-10 68.2 86 46.5
Lj4g0027394 Lotus japonicus HOM05D008291 ORTHO05D003568 8.3e-10 66.6 85 44.7
Solyc09g005280.3 Solanum lycopersicum HOM05D008291 ORTHO05D000669 8.3e-10 66.6 86 45.3
Sopen09g001250 Solanum pennellii HOM05D008291 ORTHO05D000669 8.3e-10 66.6 86 45.3
Sopen05g010220 Solanum pennellii HOM05D008291 ORTHO05D012653 2.4e-09 65.1 86 44.2
Sopen10g007560 Solanum pennellii HOM05D008291 ORTHO05D016169 9.1e-09 63.2 85 43.5
Medtr0031s0130 Medicago truncatula HOM05D000107 ORTHO05D036769 2.9e-07 58.2 62 45.2
Medtr0009s0330 Medicago truncatula HOM05D008291 ORTHO05D003568 5.0e-07 57.4 56 53.6
Sopen03g016170 Solanum pennellii HOM05D008291 ORTHO05D016169 5.0e-07 57.4 57 47.4
arahy.Tifrunner.gnm1.ann1.EW3BSR Arachis hypogaea HOM05D008291 ORTHO05D000669 6.6e-07 57.0 51 49.0
arahy.Tifrunner.gnm1.ann1.TSWN09 Arachis hypogaea HOM05D008291 ORTHO05D000669 6.6e-07 57.0 51 49.0
Sopen08g014000 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-06 55.8 60 45.0
Phvul.002G246000 Phaseolus vulgaris HOM05D008291 ORTHO05D003568 1.9e-06 55.5 74 43.2
TPR.G6754 Trifolium pratense HOM05D008291 ORTHO05D003568 1.9e-06 55.5 82 40.2
Glyma.08G123400 Glycine max HOM05D008291 ORTHO05D000669 2.5e-06 55.1 74 41.9


User provided reference genes

Program Settings