Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18258 Trifolium pratense HOM05D007911 ORTHO05D009536 0.0e+00 1413.7 819 100.0
Psat3g074440 Pisum sativum HOM05D007911 ORTHO05D009536 2.4e-151 540.4 1040 44.9
Ca_08429_v3 Cicer arietinum L. HOM05D007911 ORTHO05D009536 1.1e-135 488.4 573 50.8
Lj1g0009156 Lotus japonicus HOM05D007911 ORTHO05D009536 1.8e-127 461.1 837 40.6
Glyma.03G133900 Glycine max HOM05D007911 ORTHO05D009536 2.4e-111 407.5 931 36.5
Medtr2g012890 Medicago truncatula HOM05D007911 ORTHO05D009536 3.2e-108 397.1 811 38.6
Phvul.001G129400 Phaseolus vulgaris HOM05D007911 ORTHO05D009536 4.3e-105 386.7 828 37.8
Glyma.19G136200 Glycine max HOM05D007911 ORTHO05D009536 6.1e-99 366.3 922 34.7
arahy.Tifrunner.gnm1.ann1.18RKPD Arachis hypogaea HOM05D007911 ORTHO05D009536 1.5e-97 361.7 837 36.4
VMungo1383G2470 Vigna mungo HOM05D007911 ORTHO05D009536 2.2e-96 357.8 830 36.3
arahy.Tifrunner.gnm1.ann1.BL1IZ1 Arachis hypogaea HOM05D007911 ORTHO05D009536 1.1e-95 355.5 847 36.5
Lalb_Chr01g0017411 Lupinus albus HOM05D007911 ORTHO05D009536 2.3e-90 337.8 865 34.2
Lalb_Chr25g0287291 Lupinus albus HOM05D007911 ORTHO05D009536 2.1e-59 235.0 213 59.6
Medtr7g091040 Medicago truncatula HOM05D007911 ORTHO05D009536 4.0e-50 204.1 147 68.7
CiPaw.09G040100 Carya illinoinensis HOM05D007911 ORTHO05D009536 3.2e-39 167.9 636 28.0
QL07p003623 Quercus lobata HOM05D007911 ORTHO05D009536 2.7e-38 164.9 267 40.4
Cfa016782 Carpinus fangiana HOM05D007911 ORTHO05D009536 7.8e-38 163.3 743 26.0
Haze_19798 Corylus avellana HOM05D007911 ORTHO05D009536 1.1e-36 159.5 595 28.2
CANSAT80G1261 Cannabis sativa HOM05D007911 ORTHO05D009536 3.3e-36 157.9 303 34.7
Gohir.D01G119650 Gossypium hirsutum HOM05D007911 ORTHO05D009536 9.6e-36 156.4 552 28.1
Prupe.7G054000 Prunus persica HOM05D007911 ORTHO05D009536 2.8e-35 154.8 200 45.0
Duzib093G1996 Durio zibethinus HOM05D007911 ORTHO05D009536 2.4e-34 151.8 269 39.0
Manes.08G052400 Manihot esculenta HOM05D007911 ORTHO05D009536 5.2e-34 150.6 480 27.5
arahy.Tifrunner.gnm1.ann1.XA9LH2 Arachis hypogaea HOM05D007911 ORTHO05D009536 1.5e-33 149.1 143 59.4
Gohir.A01G130811 Gossypium hirsutum HOM05D007911 ORTHO05D009536 1.5e-33 149.1 564 27.5
Gorai.002G146100 Gossypium raimondii HOM05D007911 ORTHO05D009536 9.9e-33 146.4 660 26.5
Atru.chr1.1239 Acer truncatum HOM05D007911 ORTHO05D009536 1.3e-32 146.0 120 61.7
TWI53G0905 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 1.3e-32 146.0 194 42.8
CANSAT80G2434 Cannabis sativa HOM05D007911 ORTHO05D009536 1.7e-32 145.6 303 33.3
VMungo0720G0307 Vigna mungo HOM05D007911 ORTHO05D009536 1.1e-31 142.9 107 65.4
Lalb_Chr25g0287301 Lupinus albus HOM05D007911 ORTHO05D009536 1.4e-31 142.5 534 29.6
COL.COLO4_33204 Corchorus olitorius HOM05D007911 ORTHO05D009536 2.4e-31 141.7 193 43.5
Thecc.05G151800 Theobroma cacao HOM05D007911 ORTHO05D009536 2.4e-31 141.7 249 36.9
Potri.016G043300 Populus trichocarpa HOM05D007911 ORTHO05D009536 3.9e-29 134.4 885 22.7
RcHm_v2.0_Chr3g0483481 Rosa chinensis HOM05D020102 ORTHO05D009536 6.6e-29 133.7 288 33.0
Atru.chr12.1999 Acer truncatum HOM05D007911 ORTHO05D009536 7.3e-28 130.2 244 38.1
FAN09G4584 Fragaria x ananassa HOM05D020102 ORTHO05D009536 3.6e-27 127.9 131 45.8
Ciclev10006879m.g Citrus clementina HOM05D007911 ORTHO05D009536 1.1e-26 126.3 124 51.6
Duzib106G0073 Durio zibethinus HOM05D007911 ORTHO05D009536 3.1e-26 124.8 138 50.7
FvH4_6g24470 Fragaria vesca HOM05D020102 ORTHO05D009536 3.1e-26 124.8 131 45.8
Actinidia39204 Actinidia chinensis HOM05D007911 ORTHO05D009536 6.9e-26 123.6 199 38.7
FAN14G4000 Fragaria x ananassa HOM05D020102 ORTHO05D009536 2.6e-25 121.7 131 44.3
Actinidia09304 Actinidia chinensis HOM05D007911 ORTHO05D009536 5.8e-25 120.6 216 36.6
Sabra06G0032200 Salix brachista HOM05D007911 ORTHO05D009536 9.9e-25 119.8 623 24.2
TAR636G2018 Trochodendron aralioides HOM05D007911 ORTHO05D009536 8.4e-24 116.7 216 35.6
Oeu035501.1 Olea europaea HOM05D007911 ORTHO05D009536 1.1e-23 116.3 144 45.1
Potri.006G046700 Populus trichocarpa HOM05D007911 ORTHO05D009536 1.4e-23 115.9 267 31.5
TWI77G0280 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 1.9e-23 115.5 227 33.5
Nn2g15134 Nelumbo nucifera HOM05D007911 ORTHO05D009536 1.2e-22 112.8 196 37.2
Cpa.g.sc1210.2 Carica papaya HOM05D007911 ORTHO05D009536 2.7e-22 111.7 148 39.2
Eucgr.A02312 Eucalyptus grandis HOM05D007911 ORTHO05D009536 2.7e-22 111.7 292 31.8
MELO3C026340.2 Cucumis melo HOM05D007911 ORTHO05D009536 3.5e-22 111.3 157 39.5
ClCG04G003660 Citrullus lanatus HOM05D007911 ORTHO05D009536 2.3e-21 108.6 160 40.6
PGR004G0024 Punica granatum HOM05D007911 ORTHO05D009536 1.5e-20 105.9 133 43.6
CSS0030068 Camellia sinensis var. sinensis HOM05D007911 ORTHO05D009536 9.6e-20 103.2 203 36.9
Rhsim03G0028700 Rhododendron simsii HOM05D007911 ORTHO05D009536 3.6e-19 101.3 179 36.3
Peaxi162Scf00130g00827 Petunia axillaris HOM05D017238 ORTHO05D009536 4.8e-19 100.9 124 44.4
Nitab4.5_0000826g0230 Nicotiana tabacum HOM05D017238 ORTHO05D009536 4.0e-18 97.8 107 45.8
Nitab4.5_0001618g0290 Nicotiana tabacum HOM05D017238 ORTHO05D009536 1.2e-17 96.3 133 42.9
Hma1.2p1_0005F.1_g004500 Hydrangea macrophylla HOM05D007911 ORTHO05D009536 2.0e-17 95.5 185 34.1
PSO339G2888 Papaver somniferum HOM05D007911 ORTHO05D009536 3.4e-17 94.7 123 42.3
CAN.G676.9 Capsicum annuum HOM05D017238 ORTHO05D009536 7.6e-17 93.6 98 50.0
vmacro21970 Vaccinium macrocarpon HOM05D007911 ORTHO05D009536 7.6e-17 93.6 170 35.9
Sopen04g008390 Solanum pennellii HOM05D017238 ORTHO05D009536 3.8e-16 91.3 105 46.7
Sed0016742 Sechium edule HOM05D007911 ORTHO05D009536 8.4e-16 90.1 112 42.0
Solyc04g016290.3 Solanum lycopersicum HOM05D017238 ORTHO05D009536 1.4e-15 89.4 105 44.8
MSTRG.6410 Avicennia marina HOM05D007911 ORTHO05D009536 7.1e-15 87.0 120 43.3
FAN05G5247 Fragaria x ananassa HOM05D020102 ORTHO05D009536 7.1e-15 87.0 96 42.7
PSO384G4398 Papaver somniferum HOM05D007911 ORTHO05D009536 2.7e-14 85.1 123 40.7
SGA_v2.0_scaffold69G23124 Striga asiatica HOM05D007911 ORTHO05D009536 7.9e-14 83.6 171 32.7
Aqoxy1G00297 Aquilegia oxysepala HOM05D007911 ORTHO05D009536 1.0e-13 83.2 147 39.5
arahy.Tifrunner.gnm1.ann1.808QWK Arachis hypogaea HOM05D007911 ORTHO05D009536 1.8e-13 82.4 61 65.6
EL10Ac3g07134 Beta vulgaris HOM05D021336 ORTHO05D009536 2.3e-13 82.0 200 32.5
SGA_v2.0_scaffold105G30375 Striga asiatica HOM05D007911 ORTHO05D009536 3.3e-12 78.2 113 38.9
Cc06_g17980 Coffea canephora HOM05D007911 ORTHO05D009536 1.4e-10 72.8 85 42.4
CsaV3_4G027600 Cucumis sativus L. HOM05D007911 ORTHO05D009536 1.4e-10 72.8 134 32.8
SalBow6G1456 Salvia bowleyana HOM05D007911 ORTHO05D009536 3.1e-10 71.6 75 45.3
AUR62026093 Chenopodium quinoa HOM05D021336 ORTHO05D009536 4.0e-10 71.2 196 28.6
SalBow6G0990 Salvia bowleyana HOM05D007911 ORTHO05D009536 9.0e-10 70.1 73 45.2
Sc13g0001600 Simmondsia chinensis HOM05D007911 ORTHO05D009536 1.2e-09 69.7 182 31.9
Hund19135 Selenicereus undatus HOM05D021336 ORTHO05D009536 2.0e-09 68.9 233 29.6
Ah.04g151450 Amaranthus hybridus HOM05D021336 ORTHO05D009536 1.0e-08 66.6 260 26.5
HanXRQChr08g0234551 Helianthus annuus HOM05D007911 ORTHO05D009536 2.2e-08 65.5 107 40.2
Hund24682 Selenicereus undatus HOM05D007911 ORTHO05D009536 2.2e-08 65.5 250 27.6
Lsat_1_v5_gn_9_31060 Lactuca sativa HOM05D007911 ORTHO05D009536 2.9e-08 65.1 215 28.8
ECA247G2582 Erigeron canadensis HOM05D007911 ORTHO05D009536 1.4e-07 62.8 111 36.0
Psat3g160720 Pisum sativum HOM05D001129 ORTHO05D001619 1.4e-07 62.8 59 50.8
AUR62024506 Chenopodium quinoa HOM05D021336 ORTHO05D009536 2.5e-07 62.0 193 28.0


User provided reference genes

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