Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18246 Trifolium pratense HOM05D000386 ORTHO05D411566 1.2e-42 176.4 110 100.0
Medtr7g091350 Medicago truncatula HOM05D000386 ORTHO05D010267 5.8e-13 77.8 51 76.5
Psat3g073120 Pisum sativum HOM05D000386 ORTHO05D000406 1.9e-11 72.8 51 74.5
Lj1g0010548 Lotus japonicus HOM05D000386 ORTHO05D000406 1.1e-08 63.5 42 73.8
VMungo1383G2874 Vigna mungo HOM05D000386 ORTHO05D000406 1.3e-07 60.1 48 60.4
Lalb_Chr25g0287201 Lupinus albus HOM05D000386 ORTHO05D000406 2.1e-07 59.3 48 66.7
Glyma.03G135200 Glycine max HOM05D000386 ORTHO05D000406 3.6e-07 58.5 49 61.2
Lj4g0014202 Lotus japonicus HOM05D000386 ORTHO05D000406 6.2e-07 57.8 44 56.8
GSVIVG01031528001 Vitis vinifera HOM05D000386 ORTHO05D000406 8.1e-07 57.4 47 57.4
Atru.chr3.2668 Acer truncatum HOM05D000386 ORTHO05D000406 1.1e-06 57.0 47 53.2
Glyma.19G137700 Glycine max HOM05D000386 ORTHO05D000406 1.1e-06 57.0 44 63.6
Hund07472 Selenicereus undatus HOM05D000386 ORTHO05D000406 1.1e-06 57.0 47 55.3
arahy.Tifrunner.gnm1.ann1.LUJX61 Arachis hypogaea HOM05D000386 ORTHO05D000406 1.4e-06 56.6 44 54.5
COL.COLO4_28768 Corchorus olitorius HOM05D000386 ORTHO05D000406 1.8e-06 56.2 44 56.8
FvH4_3g28480 Fragaria vesca HOM05D000386 ORTHO05D000406 1.8e-06 56.2 63 47.6
Gohir.D09G109300 Gossypium hirsutum HOM05D000386 ORTHO05D000406 2.4e-06 55.8 46 56.5
Gorai.006G126900 Gossypium raimondii HOM05D000386 ORTHO05D000406 2.4e-06 55.8 46 56.5
Lj2C625T7 Lonicera japonica HOM05D000386 ORTHO05D000406 2.4e-06 55.8 44 56.8
Lalb_Chr20g0110581 Lupinus albus HOM05D000386 ORTHO05D000406 2.4e-06 55.8 53 52.8
Manes.07G034500 Manihot esculenta HOM05D000386 ORTHO05D000406 2.4e-06 55.8 43 55.8
QL11p022698 Quercus lobata HOM05D000386 ORTHO05D000406 2.4e-06 55.8 42 54.8
QL11p022776 Quercus lobata HOM05D000386 ORTHO05D000406 2.4e-06 55.8 42 54.8
RcHm_v2.0_Chr5g0052971 Rosa chinensis HOM05D000386 ORTHO05D000406 2.4e-06 55.8 53 49.1
TAR623G1043 Trochodendron aralioides HOM05D000386 ORTHO05D000406 2.4e-06 55.8 44 56.8
BcaB02g11253 Brassica carinata HOM05D000386 ORTHO05D000406 3.1e-06 55.5 44 56.8
BcaC08g43918 Brassica carinata HOM05D000386 ORTHO05D000406 3.1e-06 55.5 44 56.8
A05p19530 Brassica napus HOM05D000386 ORTHO05D000406 3.1e-06 55.5 44 56.8
C06p13120 Brassica napus HOM05D000386 ORTHO05D000406 3.1e-06 55.5 44 56.8
BolC6t36468H Brassica oleracea HOM05D000386 ORTHO05D000406 3.1e-06 55.5 44 56.8
BraA05t20857Z Brassica rapa HOM05D000386 ORTHO05D000406 3.1e-06 55.5 44 56.8
CANSAT54G0078 Cannabis sativa HOM05D000386 ORTHO05D000406 3.1e-06 55.5 46 52.2
Eucgr.K01723 Eucalyptus grandis HOM05D000386 ORTHO05D000406 3.1e-06 55.5 41 58.5
Thhalv10011278m.g Eutrema salsugineum HOM05D000386 ORTHO05D000406 3.1e-06 55.5 44 56.8
arahy.Tifrunner.gnm1.ann1.A1WJ1R Arachis hypogaea HOM05D000386 ORTHO05D000406 4.0e-06 55.1 44 52.3
CiPaw.14G117200 Carya illinoinensis HOM05D000386 ORTHO05D000406 4.0e-06 55.1 46 52.2
FAN09G4290 Fragaria x ananassa HOM05D000386 ORTHO05D000406 4.0e-06 55.1 43 58.1
PGR142G0213 Punica granatum HOM05D000386 ORTHO05D000406 4.0e-06 55.1 71 38.0
PGR142G1652 Punica granatum HOM05D000386 ORTHO05D000406 4.0e-06 55.1 71 38.0
Sed0003621 Sechium edule HOM05D000386 ORTHO05D000406 4.0e-06 55.1 44 54.5
vmacro04132 Vaccinium macrocarpon HOM05D000386 ORTHO05D000406 4.0e-06 55.1 43 55.8
EL10Ac4g10214 Beta vulgaris HOM05D000386 ORTHO05D000406 5.3e-06 54.7 71 36.6
CSS0024001 Camellia sinensis var. sinensis HOM05D000386 ORTHO05D000406 5.3e-06 54.7 46 52.2
CSS0029105 Camellia sinensis var. sinensis HOM05D000386 ORTHO05D000406 5.3e-06 54.7 46 52.2
Glyma.12G020300 Glycine max HOM05D000386 ORTHO05D000406 5.3e-06 54.7 46 52.2
Peaxi162Scf00004g03211 Petunia axillaris HOM05D000386 ORTHO05D000406 5.3e-06 54.7 46 54.3
PGR142G0640 Punica granatum HOM05D000386 ORTHO05D000406 5.3e-06 54.7 42 54.8
PGR142G2489 Punica granatum HOM05D000386 ORTHO05D000406 5.3e-06 54.7 42 54.8
QL02p098521 Quercus lobata HOM05D000386 ORTHO05D000406 5.3e-06 54.7 43 58.1
QL02p098534 Quercus lobata HOM05D000386 ORTHO05D000406 5.3e-06 54.7 43 58.1
RcHm_v2.0_Chr5g0053001 Rosa chinensis HOM05D000386 ORTHO05D000406 5.3e-06 54.7 45 53.3
Aa31LG10G3260 Aethionema arabicum HOM05D000386 ORTHO05D000406 6.9e-06 54.3 55 49.1
COL.COLO4_32300 Corchorus olitorius HOM05D000386 ORTHO05D010267 6.9e-06 54.3 38 55.3
Migut.D00624 Erythranthe guttata HOM05D000386 ORTHO05D000406 6.9e-06 54.3 45 53.3
Eucgr.K01986 Eucalyptus grandis HOM05D000386 ORTHO05D000406 6.9e-06 54.3 41 58.5
MD03G1172300 Malus domestica HOM05D000386 ORTHO05D000406 6.9e-06 54.3 46 52.2
QL02p098509 Quercus lobata HOM05D000386 ORTHO05D010267 6.9e-06 54.3 43 58.1
THA.LOC104816873 Tarenaya hassleriana HOM05D000386 ORTHO05D000406 6.9e-06 54.3 44 54.5
AL1G59390 Arabidopsis lyrata HOM05D000386 ORTHO05D000406 9.0e-06 53.9 44 56.8
AT1G51500 Arabidopsis thaliana HOM05D000386 ORTHO05D000406 9.0e-06 53.9 44 56.8
arahy.Tifrunner.gnm1.ann1.95N1QS Arachis hypogaea HOM05D000386 ORTHO05D000406 9.0e-06 53.9 69 34.8
Carub.0001s4035 Capsella rubella HOM05D000386 ORTHO05D000406 9.0e-06 53.9 44 56.8
Eucgr.J00746 Eucalyptus grandis HOM05D000386 ORTHO05D000406 9.0e-06 53.9 56 46.4
HanXRQChr13g0401291 Helianthus annuus HOM05D000386 ORTHO05D000406 9.0e-06 53.9 44 54.5
QL11p022662 Quercus lobata HOM05D000386 ORTHO05D000406 9.0e-06 53.9 42 52.4
RcHm_v2.0_Chr2g0112631 Rosa chinensis HOM05D000386 ORTHO05D000406 9.0e-06 53.9 43 53.5
Sabra17G0042900 Salix brachista HOM05D000386 ORTHO05D000406 9.0e-06 53.9 43 53.5
TPR.G34511 Trifolium pratense HOM05D000386 ORTHO05D000406 9.0e-06 53.9 52 44.2
TPR.G34516 Trifolium pratense HOM05D000386 ORTHO05D000406 9.0e-06 53.9 52 44.2
TWI74G1483 Tripterygium wilfordii HOM05D000386 ORTHO05D000406 9.0e-06 53.9 67 43.3


User provided reference genes

Program Settings