Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G181 Trifolium pratense HOM05D000072 ORTHO05D000318 1.3e-33 145.6 64 100.0
TPR.G22390 Trifolium pratense HOM05D000072 ORTHO05D000026 1.2e-21 105.9 62 71.0
Medtr7g082460 Medicago truncatula HOM05D000072 ORTHO05D000026 3.7e-20 100.9 58 75.9
TPR.G40726 Trifolium pratense HOM05D000072 ORTHO05D000318 1.4e-19 99.0 53 73.6
Medtr7g082430 Medicago truncatula HOM05D000072 ORTHO05D000026 7.0e-19 96.7 57 70.2
Medtr7g082470 Medicago truncatula HOM05D000072 ORTHO05D000026 7.8e-18 93.2 57 64.9
Medtr1g115485 Medicago truncatula HOM05D000072 ORTHO05D000026 3.9e-17 90.9 53 64.2
Psat3g097480 Pisum sativum HOM05D000072 ORTHO05D000026 6.2e-15 83.6 51 62.7
Medtr7g082537 Medicago truncatula HOM05D000072 ORTHO05D000318 1.0e-14 82.8 57 59.6
TPR.G22395 Trifolium pratense HOM05D000072 ORTHO05D000026 3.1e-14 81.3 53 62.3
Psat3g098040 Pisum sativum HOM05D000260 ORTHO05D000318 4.0e-14 80.9 60 55.0
Psat3g097520 Pisum sativum HOM05D000072 ORTHO05D000026 1.5e-13 79.0 52 55.8
Ca_08084_v3 Cicer arietinum L. HOM05D000072 ORTHO05D000318 2.0e-13 78.6 57 56.1
Lj1g0010679 Lotus japonicus HOM05D000260 ORTHO05D000318 1.7e-12 75.5 57 52.6
Lj1g0005057 Lotus japonicus HOM05D000072 ORTHO05D000026 1.4e-11 72.4 57 49.1
Glyma.18G294400 Glycine max HOM05D000022 ORTHO05D035979 5.4e-11 70.5 55 52.7
Ca_08086_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 7.0e-11 70.1 57 49.1
Glyma.18G294600 Glycine max HOM05D000072 ORTHO05D000318 9.2e-11 69.7 51 54.9
VMungo1383G1056 Vigna mungo HOM05D000022 ORTHO05D035979 1.7e-09 65.5 56 53.6
SGA_v2.0_scaffold202G41465 Striga asiatica HOM05D000260 ORTHO05D000318 9.5e-08 59.7 62 35.5
AUR62023280 Chenopodium quinoa HOM05D000260 ORTHO05D000318 1.6e-07 58.9 53 49.1
AUR62009021 Chenopodium quinoa HOM05D000260 ORTHO05D000318 2.8e-07 58.2 53 47.2
Lj4g0004962 Lotus japonicus HOM05D000260 ORTHO05D000318 4.7e-07 57.4 60 36.7
Dinv33960 Davidia involucrata HOM05D000260 ORTHO05D000318 6.2e-07 57.0 54 44.4
Cc07_g08660 Coffea canephora HOM05D000072 ORTHO05D000026 8.1e-07 56.6 57 45.6
Gohir.A11G165350 Gossypium hirsutum HOM05D000260 ORTHO05D000318 1.4e-06 55.8 54 48.1
Gohir.A11G165500 Gossypium hirsutum HOM05D000260 ORTHO05D000318 1.4e-06 55.8 54 48.1
HanXRQChr11g0325411 Helianthus annuus HOM05D000072 ORTHO05D000026 1.4e-06 55.8 61 42.6
Lalb_Chr07g0187791 Lupinus albus HOM05D000260 ORTHO05D000318 1.4e-06 55.8 54 38.9
COL.COLO4_09361 Corchorus olitorius HOM05D000260 ORTHO05D000318 1.8e-06 55.5 53 49.1
Medtr7g082490 Medicago truncatula HOM05D000072 ORTHO05D000026 1.8e-06 55.5 34 67.6
Duzib138G0276 Durio zibethinus HOM05D000260 ORTHO05D000318 2.3e-06 55.1 53 45.3
HanXRQChr11g0325081 Helianthus annuus HOM05D000260 ORTHO05D000318 2.3e-06 55.1 58 41.4
EL10Ac2g04544 Beta vulgaris HOM05D000260 ORTHO05D000318 3.1e-06 54.7 55 45.5
TPR.G5113 Trifolium pratense HOM05D000260 ORTHO05D000318 3.1e-06 54.7 54 40.7
Ciclev10024533m.g Citrus clementina HOM05D000260 ORTHO05D000318 5.2e-06 53.9 53 43.4
Duzib138G1503 Durio zibethinus HOM05D000260 ORTHO05D000318 5.2e-06 53.9 53 45.3
ECA232G1450 Erigeron canadensis HOM05D002670 ORTHO05D000318 5.2e-06 53.9 61 37.7
HanXRQChr11g0325031 Helianthus annuus HOM05D000072 ORTHO05D000318 5.2e-06 53.9 58 39.7
HanXRQChr11g0325421 Helianthus annuus HOM05D000072 ORTHO05D000026 5.2e-06 53.9 58 39.7
Oeu036851.1 Olea europaea HOM05D000260 ORTHO05D000318 5.2e-06 53.9 60 38.3
Ca_11584_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 6.8e-06 53.5 54 38.9
Eucgr.B00759 Eucalyptus grandis HOM05D000260 ORTHO05D000318 6.8e-06 53.5 59 42.4
Rhsim10G0069600 Rhododendron simsii HOM05D000260 ORTHO05D000318 6.8e-06 53.5 52 40.4
Atru.chr1.1005 Acer truncatum HOM05D000072 ORTHO05D000026 8.9e-06 53.1 53 47.2
Potri.017G116900 Populus trichocarpa HOM05D000072 ORTHO05D000026 8.9e-06 53.1 56 44.6


User provided reference genes

Program Settings