Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18 Trifolium pratense HOM05D000529 ORTHO05D000472 1.5e-17 91.7 43 100.0
TPR.G35311 Trifolium pratense HOM05D000529 ORTHO05D000472 2.2e-16 87.8 43 95.3
TPR.G1688 Trifolium pratense HOM05D000529 ORTHO05D000472 6.4e-16 86.3 43 95.3
Medtr5g018070 Medicago truncatula HOM05D000529 ORTHO05D000472 2.4e-15 84.3 43 90.7
Medtr5g018060 Medicago truncatula HOM05D000529 ORTHO05D000472 3.2e-15 84.0 43 93.0
Psat2g164720 Pisum sativum HOM05D000529 ORTHO05D000472 9.2e-15 82.4 43 90.7
Medtr5g018160 Medicago truncatula HOM05D000529 ORTHO05D000472 3.5e-14 80.5 43 86.0
TPR.G11364 Trifolium pratense HOM05D000529 ORTHO05D000472 3.5e-14 80.5 43 88.4
Medtr5g018120 Medicago truncatula HOM05D000529 ORTHO05D000472 1.7e-13 78.2 43 86.0
TPR.G11341 Trifolium pratense HOM05D000529 ORTHO05D000472 1.5e-12 75.1 43 83.7
Ca_24796_v3 Cicer arietinum L. HOM05D000529 ORTHO05D000472 2.5e-12 74.3 43 81.4
Lj2g0013161 Lotus japonicus HOM05D000529 ORTHO05D000472 7.3e-12 72.8 43 79.1
Glyma.01G183400 Glycine max HOM05D000529 ORTHO05D000472 1.1e-10 68.9 43 74.4
Glyma.11G058900 Glycine max HOM05D000529 ORTHO05D000472 1.8e-10 68.2 43 74.4
Medtr5g018210 Medicago truncatula HOM05D000529 ORTHO05D000472 2.3e-10 67.8 43 76.7
TPR.G11353 Trifolium pratense HOM05D000529 ORTHO05D000472 2.3e-10 67.8 43 74.4
arahy.Tifrunner.gnm1.ann1.BS5BMY Arachis hypogaea HOM05D000060 ORTHO05D000472 3.1e-10 67.4 43 72.1
arahy.Tifrunner.gnm1.ann1.GG3E31 Arachis hypogaea HOM05D000529 ORTHO05D000472 3.1e-10 67.4 43 72.1
arahy.Tifrunner.gnm1.ann1.HV9GRN Arachis hypogaea HOM05D000529 ORTHO05D000472 4.0e-10 67.0 43 72.1
Lalb_Chr05g0213151 Lupinus albus HOM05D000529 ORTHO05D000472 4.0e-10 67.0 43 69.8
arahy.Tifrunner.gnm1.ann1.U5DEH8 Arachis hypogaea HOM05D000529 ORTHO05D000472 5.2e-10 66.6 43 72.1
VMungo1215G3170 Vigna mungo HOM05D000529 ORTHO05D000472 5.2e-10 66.6 43 69.8
arahy.Tifrunner.gnm1.ann1.4KB2JU Arachis hypogaea HOM05D000529 ORTHO05D000472 8.9e-10 65.9 43 67.4
Dinv29950 Davidia involucrata HOM05D000529 ORTHO05D000472 2.2e-08 61.2 43 67.4
Ca_22204_v3 Cicer arietinum L. HOM05D000529 ORTHO05D000472 2.9e-08 60.8 44 65.9
Dinv39897 Davidia involucrata HOM05D000529 ORTHO05D000472 4.9e-08 60.1 43 65.1
Lj4g0018288 Lotus japonicus HOM05D000529 ORTHO05D000472 4.9e-08 60.1 43 65.1
VMungo0251G0147 Vigna mungo HOM05D000529 ORTHO05D000472 8.4e-08 59.3 44 65.9
CSS0017568 Camellia sinensis var. sinensis HOM05D000529 ORTHO05D000472 1.1e-07 58.9 43 62.8
Dinv29949 Davidia involucrata HOM05D000529 ORTHO05D000472 1.1e-07 58.9 41 65.9
Lalb_Chr05g0226801 Lupinus albus HOM05D000529 ORTHO05D000472 1.1e-07 58.9 44 68.2
Actinidia30857 Actinidia chinensis HOM05D000529 ORTHO05D000472 1.4e-07 58.5 43 62.8
Lalb_Chr16g0388441 Lupinus albus HOM05D000529 ORTHO05D000472 1.4e-07 58.5 44 65.9
Lalb_Chr16g0388421 Lupinus albus HOM05D000529 ORTHO05D000472 1.9e-07 58.2 43 55.8
Medtr8g079380 Medicago truncatula HOM05D000529 ORTHO05D000472 2.4e-07 57.8 37 67.6
arahy.Tifrunner.gnm1.ann1.M35DT6 Arachis hypogaea HOM05D000529 ORTHO05D000472 3.2e-07 57.4 42 59.5
arahy.Tifrunner.gnm1.ann1.MIV8ZD Arachis hypogaea HOM05D000529 ORTHO05D000472 3.2e-07 57.4 42 59.5
Medtr8g079360 Medicago truncatula HOM05D000529 ORTHO05D000472 3.2e-07 57.4 34 70.6
Medtr8g079400 Medicago truncatula HOM05D000529 ORTHO05D000472 3.2e-07 57.4 34 70.6
Medtr8g079550 Medicago truncatula HOM05D000529 ORTHO05D000472 3.2e-07 57.4 43 55.8
Actinidia12227 Actinidia chinensis HOM05D000529 ORTHO05D000472 4.1e-07 57.0 43 62.8
Glyma.01G183300 Glycine max HOM05D000529 ORTHO05D000472 4.1e-07 57.0 43 67.4
Glyma.17G180000 Glycine max HOM05D000529 ORTHO05D000472 4.1e-07 57.0 35 68.6
TPR.G19028 Trifolium pratense HOM05D000529 ORTHO05D000472 4.1e-07 57.0 43 55.8
Ca_22206_v3 Cicer arietinum L. HOM05D000529 ORTHO05D000472 5.4e-07 56.6 35 68.6
Duzib147G1638 Durio zibethinus HOM05D000529 ORTHO05D000472 5.4e-07 56.6 43 58.1
Glyma.05G082200 Glycine max HOM05D000529 ORTHO05D000472 9.2e-07 55.8 35 71.4
Lj7A50G14 Lonicera japonica HOM05D000529 ORTHO05D000472 9.2e-07 55.8 37 70.3
Lj7C46T7 Lonicera japonica HOM05D000529 ORTHO05D000472 9.2e-07 55.8 37 70.3
Phvul.003G247550 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 9.2e-07 55.8 44 61.4
Psat4g088600 Pisum sativum HOM05D000529 ORTHO05D000472 9.2e-07 55.8 35 71.4
Glyma.17G180100 Glycine max HOM05D000529 ORTHO05D000472 1.2e-06 55.5 44 61.4
Ciclev10024907m.g Citrus clementina HOM05D000529 ORTHO05D000472 1.6e-06 55.1 37 70.3
Glyma.17G179200 Glycine max HOM05D000529 ORTHO05D000472 1.6e-06 55.1 35 68.6
Gohir.A11G189400 Gossypium hirsutum HOM05D000529 ORTHO05D000472 1.6e-06 55.1 41 56.1
Lj4A138G42 Lonicera japonica HOM05D000529 ORTHO05D000472 1.6e-06 55.1 37 67.6
Medtr8g079450 Medicago truncatula HOM05D000529 ORTHO05D000472 1.6e-06 55.1 34 64.7
GSVIVG01003572001 Vitis vinifera HOM05D000529 ORTHO05D000472 1.6e-06 55.1 37 70.3
GSVIVG01034428001 Vitis vinifera HOM05D000529 ORTHO05D000472 1.6e-06 55.1 43 58.1
Glyma.05G082500 Glycine max HOM05D000529 ORTHO05D000472 2.1e-06 54.7 44 61.4
Medtr7g024980 Medicago truncatula HOM05D000529 ORTHO05D000472 2.1e-06 54.7 34 64.7
Gohir.D11G196100 Gossypium hirsutum HOM05D000529 ORTHO05D000472 2.7e-06 54.3 41 53.7
Gorai.007G210000 Gossypium raimondii HOM05D000529 ORTHO05D000472 2.7e-06 54.3 41 53.7
TPR.G19002 Trifolium pratense HOM05D000529 ORTHO05D000472 2.7e-06 54.3 44 61.4
Glyma.17G179500 Glycine max HOM05D000529 ORTHO05D000472 3.5e-06 53.9 35 62.9
VMungo0251G2825 Vigna mungo HOM05D000529 ORTHO05D000472 3.5e-06 53.9 34 67.6
Manes.12G094100 Manihot esculenta HOM05D000529 ORTHO05D000472 4.6e-06 53.5 35 68.6
Prupe.7G139500 Prunus persica HOM05D000529 ORTHO05D000472 4.6e-06 53.5 37 64.9
GSVIVG01003565001 Vitis vinifera HOM05D000529 ORTHO05D000472 4.6e-06 53.5 41 61.0
Glyma.05G082400 Glycine max HOM05D000529 ORTHO05D000472 6.0e-06 53.1 35 62.9
Lj7A46T15 Lonicera japonica HOM05D000529 ORTHO05D000472 6.0e-06 53.1 37 67.6
Lj4g0014150 Lotus japonicus HOM05D000529 ORTHO05D000472 6.0e-06 53.1 37 62.2
Prupe.7G139600 Prunus persica HOM05D000529 ORTHO05D000472 6.0e-06 53.1 37 67.6
DCAR_021433 Daucus carota HOM05D000529 ORTHO05D000472 7.8e-06 52.8 37 64.9
Phvul.003G247500 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 7.8e-06 52.8 34 67.6


User provided reference genes

Program Settings