Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17967 Trifolium pratense HOM05D000294 ORTHO05D000177 9.1e-47 189.9 96 100.0
Psat7g088520 Pisum sativum HOM05D000294 ORTHO05D000177 5.2e-26 120.9 104 72.1
Medtr4g094680 Medicago truncatula HOM05D000294 ORTHO05D000177 1.2e-22 109.8 96 74.0
Lalb_Chr20g0114241 Lupinus albus HOM05D000294 ORTHO05D000177 6.6e-21 104.0 96 67.7
Lj6g0001831 Lotus japonicus HOM05D000294 ORTHO05D000177 4.7e-19 97.8 101 66.3
arahy.Tifrunner.gnm1.ann1.C4KZJS Arachis hypogaea HOM05D000294 ORTHO05D000177 2.3e-18 95.5 106 62.3
arahy.Tifrunner.gnm1.ann1.CX7L4G Arachis hypogaea HOM05D000294 ORTHO05D000177 2.3e-18 95.5 106 62.3
Glyma.09G052400 Glycine max HOM05D000294 ORTHO05D000177 2.3e-18 95.5 101 63.4
Lalb_Chr15g0083871 Lupinus albus HOM05D000294 ORTHO05D000177 3.4e-17 91.7 101 64.4
Lalb_Chr18g0052201 Lupinus albus HOM05D000294 ORTHO05D000177 4.4e-17 91.3 101 63.4
VMungo1309G0767 Vigna mungo HOM05D000294 ORTHO05D000177 5.8e-17 90.9 102 60.8
Glyma.15G158600 Glycine max HOM05D000294 ORTHO05D000177 1.3e-16 89.7 101 60.4
Phvul.009G241300 Phaseolus vulgaris HOM05D000294 ORTHO05D000177 1.3e-16 89.7 102 62.7
arahy.Tifrunner.gnm1.ann1.47BD5H Arachis hypogaea HOM05D000294 ORTHO05D000177 3.7e-16 88.2 99 60.6
arahy.Tifrunner.gnm1.ann1.L85JRJ Arachis hypogaea HOM05D000294 ORTHO05D000177 3.7e-16 88.2 99 60.6
Medtr2g036170 Medicago truncatula HOM05D000294 ORTHO05D000177 4.1e-15 84.7 104 56.7
MELO3C007023.2 Cucumis melo HOM05D000294 ORTHO05D000177 6.0e-14 80.9 109 54.1
CsaV3_6G052850 Cucumis sativus L. HOM05D000294 ORTHO05D000177 6.0e-14 80.9 109 54.1
Psat1g149560 Pisum sativum HOM05D000294 ORTHO05D000177 6.0e-14 80.9 99 57.6
ClCG01G025620 Citrullus lanatus HOM05D000294 ORTHO05D000177 1.7e-13 79.3 109 53.2
Lj1C1147T4 Lonicera japonica HOM05D000294 ORTHO05D000177 3.3e-12 75.1 110 49.1
TWI38G2334 Tripterygium wilfordii HOM05D000294 ORTHO05D000177 3.6e-11 71.6 111 44.1
CsaV3_1G010140 Cucumis sativus L. HOM05D000294 ORTHO05D000177 6.2e-11 70.9 116 46.6
TPR.G15081 Trifolium pratense HOM05D000294 ORTHO05D000177 8.1e-11 70.5 112 50.0
Sed0010860 Sechium edule HOM05D000294 ORTHO05D000177 1.4e-10 69.7 110 47.3
Hma1.2p1_0640F.1_g194140 Hydrangea macrophylla HOM05D000294 ORTHO05D000177 2.4e-10 68.9 109 45.0
CiPaw.09G074100 Carya illinoinensis HOM05D000294 ORTHO05D000177 4.0e-10 68.2 110 48.2
QL11p013119 Quercus lobata HOM05D000294 ORTHO05D000177 4.0e-10 68.2 109 45.0
ClCG03G004210 Citrullus lanatus HOM05D000294 ORTHO05D000177 5.2e-10 67.8 105 48.6
Rhsim13G0129000 Rhododendron simsii HOM05D000294 ORTHO05D000177 5.2e-10 67.8 112 46.4
Sabra03G0046100 Salix brachista HOM05D000294 ORTHO05D000177 5.2e-10 67.8 100 44.0
MBI18_g44048_MAGBIO Magnolia biondii HOM05D000294 ORTHO05D000177 6.8e-10 67.4 109 42.2
Potri.003G075600 Populus trichocarpa HOM05D000294 ORTHO05D000177 6.8e-10 67.4 100 43.0
Prupe.4G115600 Prunus persica HOM05D000294 ORTHO05D000177 2.0e-09 65.9 113 46.0
Nitab4.5_0006246g0030 Nicotiana tabacum HOM05D000294 ORTHO05D000177 2.6e-09 65.5 109 46.8
Ciclev10016385m.g Citrus clementina HOM05D000294 ORTHO05D000177 3.4e-09 65.1 107 47.7
Nitab4.5_0000443g0100 Nicotiana tabacum HOM05D000294 ORTHO05D000177 3.4e-09 65.1 111 45.0
PSO675G4387 Papaver somniferum HOM05D000294 ORTHO05D000177 3.4e-09 65.1 111 41.4
Cfa000668 Carpinus fangiana HOM05D000294 ORTHO05D000177 4.4e-09 64.7 111 50.5
Haze_06151 Corylus avellana HOM05D000294 ORTHO05D000177 4.4e-09 64.7 111 50.5
CiPaw.10G062600 Carya illinoinensis HOM05D000294 ORTHO05D000177 7.6e-09 63.9 111 43.2
Manes.16G052100 Manihot esculenta HOM05D000294 ORTHO05D000177 7.6e-09 63.9 109 42.2
Sed0020569 Sechium edule HOM05D000294 ORTHO05D000177 9.9e-09 63.5 106 47.2
Sopen02g017650 Solanum pennellii HOM05D000294 ORTHO05D000177 9.9e-09 63.5 110 44.5
Atru.chr10.415 Acer truncatum HOM05D000294 ORTHO05D000177 1.7e-08 62.8 104 44.2
CDE05G2082 Ceratophyllum demersum HOM05D000294 ORTHO05D000177 1.7e-08 62.8 106 46.2
COL.COLO4_17633 Corchorus olitorius HOM05D000294 ORTHO05D000177 1.7e-08 62.8 105 42.9
FvH4_3g12690 Fragaria vesca HOM05D000294 ORTHO05D000177 1.7e-08 62.8 105 41.0
FAN21G4012 Fragaria x ananassa HOM05D000294 ORTHO05D000177 1.7e-08 62.8 106 43.4
Lsat_1_v5_gn_2_61160 Lactuca sativa HOM05D000294 ORTHO05D000177 1.7e-08 62.8 107 45.8
TAR627G0988 Trochodendron aralioides HOM05D000294 ORTHO05D000177 2.2e-08 62.4 107 42.1
CSS0005021 Camellia sinensis var. sinensis HOM05D000294 ORTHO05D000177 2.9e-08 62.0 110 45.5
Potri.001G159200 Populus trichocarpa HOM05D000294 ORTHO05D000177 2.9e-08 62.0 110 41.8
CAN.G2053.1 Capsicum annuum HOM05D000294 ORTHO05D000177 3.8e-08 61.6 110 42.7
Sed0000531 Sechium edule HOM05D000294 ORTHO05D000177 3.8e-08 61.6 96 49.0
Solyc02g068510.2 Solanum lycopersicum HOM05D000294 ORTHO05D000177 3.8e-08 61.6 110 44.5
GSVIVG01012125001 Vitis vinifera HOM05D000294 ORTHO05D000177 3.8e-08 61.6 107 46.7
FAN16G2025 Fragaria x ananassa HOM05D000294 ORTHO05D000177 4.9e-08 61.2 105 43.8
Nn7g38277 Nelumbo nucifera HOM05D000294 ORTHO05D000177 4.9e-08 61.2 102 45.1
Actinidia22424 Actinidia chinensis HOM05D000294 ORTHO05D000177 6.4e-08 60.8 110 44.5
Cpa.g.sc30.133 Carica papaya HOM05D000294 ORTHO05D000177 6.4e-08 60.8 114 43.9
CDE06G2754 Ceratophyllum demersum HOM05D000294 ORTHO05D000177 6.4e-08 60.8 106 42.5
CDE11G0571 Ceratophyllum demersum HOM05D000294 ORTHO05D000177 6.4e-08 60.8 107 45.8
Migut.M01999 Erythranthe guttata HOM05D000294 ORTHO05D000177 6.4e-08 60.8 110 43.6
FAN25G0397 Fragaria x ananassa HOM05D000294 ORTHO05D000177 8.4e-08 60.5 105 41.0
RcHm_v2.0_Chr5g0020661 Rosa chinensis HOM05D000294 ORTHO05D000177 1.1e-07 60.1 108 40.7
Dinv17499 Davidia involucrata HOM05D000294 ORTHO05D000177 1.4e-07 59.7 110 45.5
Duzib132G0190 Durio zibethinus HOM05D000294 ORTHO05D000177 1.4e-07 59.7 108 41.7
PSO541G0894 Papaver somniferum HOM05D000294 ORTHO05D000177 1.4e-07 59.7 105 39.0
Peaxi162Scf00199g00612 Petunia axillaris HOM05D000294 ORTHO05D000177 2.4e-07 58.9 106 42.5
Sabra01G0132700 Salix brachista HOM05D000294 ORTHO05D000177 2.4e-07 58.9 109 42.2
Sc17g0004180 Simmondsia chinensis HOM05D000294 ORTHO05D000177 3.2e-07 58.5 101 45.5
CANSAT35G1247 Cannabis sativa HOM05D000294 ORTHO05D000177 4.2e-07 58.2 116 42.2
MD05G1248500 Malus domestica HOM05D000294 ORTHO05D000177 4.2e-07 58.2 109 42.2
ECA238G2136 Erigeron canadensis HOM05D000294 ORTHO05D000177 5.4e-07 57.8 106 41.5
Lj2A343G73 Lonicera japonica HOM05D000294 ORTHO05D000177 1.6e-06 56.2 113 46.9
Duzib052G0979 Durio zibethinus HOM05D000294 ORTHO05D000177 2.1e-06 55.8 110 43.6
Eucgr.E04309 Eucalyptus grandis HOM05D000294 ORTHO05D000177 2.1e-06 55.8 103 45.6
SGA_v2.0_scaffold175G39351 Striga asiatica HOM05D000294 ORTHO05D000177 2.1e-06 55.8 96 41.7
Thecc.02G005800 Theobroma cacao HOM05D000294 ORTHO05D000177 2.1e-06 55.8 114 41.2
Oeu056053.1 Olea europaea HOM05D000294 ORTHO05D000177 7.8e-06 53.9 107 43.0


User provided reference genes

Program Settings