Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1791 Trifolium pratense HOM05D005864 ORTHO05D006770 6.1e-45 183.7 90 100.0
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 2.1e-21 105.5 70 80.0
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 6.2e-21 104.0 70 81.4
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 4.0e-20 101.3 70 75.7
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 3.2e-17 91.7 70 71.4
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 7.1e-17 90.5 70 70.0
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 7.1e-17 90.5 70 68.6
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 9.2e-17 90.1 70 74.3
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 1.6e-16 89.4 48 91.7
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 1.1e-14 83.2 70 67.1
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 9.6e-14 80.1 70 62.9
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 4.7e-13 77.8 50 78.0
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 8.1e-13 77.0 48 79.2
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 1.1e-12 76.6 72 58.3
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 2.4e-12 75.5 65 64.6
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 2.4e-12 75.5 70 58.6
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 4.0e-12 74.7 70 58.6
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 9.0e-12 73.6 70 57.1
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 2.6e-11 72.0 65 64.6
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 9.9e-11 70.1 70 52.9
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 1.3e-10 69.7 74 55.4
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 1.7e-10 69.3 65 63.1
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 1.7e-10 69.3 72 54.2
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 2.2e-10 68.9 70 55.7
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 6.4e-10 67.4 70 57.1
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 1.1e-09 66.6 70 54.3
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 1.1e-09 66.6 72 51.4
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 1.4e-09 66.2 70 55.7
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 2.4e-09 65.5 66 51.5
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-09 65.1 71 50.7
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 4.2e-09 64.7 70 52.9
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 5.4e-09 64.3 70 50.0
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 1.6e-08 62.8 70 51.4
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 2.7e-08 62.0 70 52.9
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 4.6e-08 61.2 70 52.9
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 4.6e-08 61.2 70 52.9
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 6.0e-08 60.8 65 49.2
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 7.8e-08 60.5 70 55.7
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 1.0e-07 60.1 70 48.6
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 1.7e-07 59.3 67 47.8
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 2.3e-07 58.9 73 45.2
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 2.3e-07 58.9 66 54.5
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 5.1e-07 57.8 89 40.4
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 8.7e-07 57.0 48 58.3
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 1.1e-06 56.6 70 47.1
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 1.5e-06 56.2 70 47.1
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 1.5e-06 56.2 70 47.1
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 2.5e-06 55.5 70 42.9
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 4.3e-06 54.7 70 41.4
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 5.6e-06 54.3 70 45.7
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 5.6e-06 54.3 69 44.9
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 7.3e-06 53.9 70 42.9
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 7.3e-06 53.9 75 42.7
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 9.6e-06 53.5 70 45.7


User provided reference genes

Program Settings