Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 2.9e-51 204.9 99 100.0
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 3.0e-48 194.9 99 92.9
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 3.9e-48 194.5 99 96.0
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 4.3e-47 191.0 99 92.9
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 5.2e-45 184.1 99 88.9
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 4.3e-39 164.5 98 80.6
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 7.3e-39 163.7 98 79.6
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 3.6e-38 161.4 98 78.6
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 6.2e-38 160.6 98 78.6
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 3.1e-37 158.3 98 76.5
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 3.1e-37 158.3 99 75.8
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 5.2e-37 157.5 99 75.8
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 7.6e-36 153.7 98 73.5
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 1.4e-34 149.4 97 75.3
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 3.2e-34 148.3 94 77.7
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 1.6e-33 146.0 97 74.2
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 3.5e-33 144.8 97 71.1
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 4.6e-33 144.4 97 72.2
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 7.8e-33 143.7 96 71.9
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 1.0e-32 143.3 100 69.0
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.7e-32 142.5 97 71.1
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 2.3e-32 142.1 96 71.9
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 2.3e-32 142.1 97 72.2
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 2.3e-32 142.1 97 71.1
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 3.9e-32 141.4 96 71.9
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 5.1e-32 141.0 94 75.5
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 6.6e-32 140.6 97 71.1
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 8.7e-32 140.2 97 70.1
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 8.7e-32 140.2 97 70.1
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 1.1e-31 139.8 97 68.0
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 1.1e-31 139.8 97 70.1
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 1.5e-31 139.4 94 74.5
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 1.5e-31 139.4 97 70.1
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 1.5e-31 139.4 97 70.1
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 1.5e-31 139.4 97 71.1
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.9e-31 139.0 97 69.1
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.9e-31 139.0 97 69.1
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 1.9e-31 139.0 97 70.1
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 5.6e-31 137.5 97 70.1
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 7.3e-31 137.1 97 68.0
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 9.6e-31 136.7 97 71.1
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 9.6e-31 136.7 96 70.8
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 9.6e-31 136.7 96 69.8
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 1.3e-30 136.3 96 69.8
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 1.3e-30 136.3 97 69.1
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 1.6e-30 136.0 97 67.0
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 1.6e-30 136.0 97 64.9
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 1.6e-30 136.0 97 69.1
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 1.6e-30 136.0 97 68.0
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 2.1e-30 135.6 97 66.0
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 2.1e-30 135.6 97 69.1
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 2.1e-30 135.6 94 67.0
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 2.1e-30 135.6 96 68.8
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 3.6e-30 134.8 96 66.7
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 3.6e-30 134.8 97 67.0
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 3.6e-30 134.8 97 68.0
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 6.2e-30 134.0 97 69.1
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 8.1e-30 133.7 97 68.0
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.1e-29 133.3 97 67.0
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 1.4e-29 132.9 97 63.9
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 1.8e-29 132.5 100 64.0
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 3.1e-29 131.7 97 66.0
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 3.1e-29 131.7 93 67.7
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 4.0e-29 131.3 97 68.0
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 4.0e-29 131.3 95 69.5
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 5.3e-29 131.0 97 64.9
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 6.9e-29 130.6 96 64.6
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 9.0e-29 130.2 97 67.0
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 9.0e-29 130.2 96 67.7
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 9.0e-29 130.2 100 63.0
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.5e-28 129.4 95 65.3
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 1.5e-28 129.4 97 66.0
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 1.5e-28 129.4 97 66.0
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 2.0e-28 129.0 97 66.0
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 2.0e-28 129.0 94 63.8
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 2.0e-28 129.0 96 65.6
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 2.6e-28 128.6 95 65.3
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 3.4e-28 128.3 177 43.5
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 4.4e-28 127.9 96 63.5
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 4.4e-28 127.9 98 62.2
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 5.8e-28 127.5 100 57.0
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 7.6e-28 127.1 96 65.6
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 1.3e-27 126.3 96 63.5
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 1.3e-27 126.3 96 63.5
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 1.3e-27 126.3 96 63.5
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 2.9e-27 125.2 101 62.4
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 4.9e-27 124.4 96 62.5
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 1.1e-26 123.2 96 61.5
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 1.9e-26 122.5 96 61.5
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 1.9e-26 122.5 136 49.3
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 2.4e-26 122.1 96 60.4
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 3.2e-26 121.7 97 59.8
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 4.2e-26 121.3 97 60.8
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 5.4e-26 120.9 97 60.8
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 7.1e-26 120.6 123 52.8
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 1.2e-25 119.8 100 59.0
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 1.6e-25 119.4 93 61.3
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 3.5e-25 118.2 93 61.3
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 4.6e-25 117.9 94 59.6
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 7.8e-25 117.1 93 60.2
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 7.8e-25 117.1 93 60.2
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 1.0e-24 116.7 91 62.6
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 3.3e-23 111.7 96 57.3
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 2.8e-22 108.6 162 39.5
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 1.7e-19 99.4 96 54.2
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 3.8e-19 98.2 94 47.9
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 4.9e-19 97.8 72 65.3
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 1.6e-17 92.8 72 59.7
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 2.1e-17 92.4 96 44.8
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 2.7e-17 92.0 97 53.6
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 1.9e-15 85.9 61 67.2
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 2.5e-15 85.5 55 69.1
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 3.3e-15 85.1 94 40.4
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 9.6e-15 83.6 99 43.4
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 9.6e-15 83.6 54 70.4
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 1.6e-14 82.8 54 72.2
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 2.8e-14 82.0 87 43.7
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 8.4e-11 70.5 48 68.8
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 5.1e-08 61.2 91 35.2
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 2.8e-06 55.5 44 56.8


User provided reference genes

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