Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17830 Trifolium pratense HOM05D000254 ORTHO05D031004 2.5e-115 418.7 202 100.0
TPR.G34440 Trifolium pratense HOM05D005709 ORTHO05D006306 1.3e-18 97.4 87 57.5
TPR.G11089 Trifolium pratense HOM05D000254 ORTHO05D000165 3.5e-16 89.4 65 64.6
Glyma.10G055700 Glycine max HOM05D000254 ORTHO05D000165 1.5e-14 84.0 102 48.0
Lj1g0009549 Lotus japonicus HOM05D000254 ORTHO05D000165 3.4e-11 72.8 65 46.2
Lj3g0020482 Lotus japonicus HOM05D000254 ORTHO05D000165 4.5e-11 72.4 78 43.6
TPR.G31082 Trifolium pratense HOM05D000254 ORTHO05D000165 7.6e-11 71.6 49 71.4
CSS0027448 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.3e-10 70.9 74 47.3
Glyma.18G136400 Glycine max HOM05D000254 ORTHO05D000165 1.7e-10 70.5 77 46.8
Lj1g0011213 Lotus japonicus HOM05D000254 ORTHO05D000165 1.7e-10 70.5 61 45.9
Glyma.19G047200 Glycine max HOM05D000254 ORTHO05D000165 2.2e-10 70.1 65 53.8
Glyma.01G054700 Glycine max HOM05D000254 ORTHO05D000165 3.8e-10 69.3 59 54.2
SGA_v2.0_scaffold19G08785 Striga asiatica HOM05D000254 ORTHO05D000165 3.8e-10 69.3 64 48.4
Glyma.16G122000 Glycine max HOM05D000254 ORTHO05D000165 5.0e-10 68.9 102 44.1
AL3G40330 Arabidopsis lyrata HOM05D000254 ORTHO05D000165 6.5e-10 68.6 80 40.0
Glyma.11G176303 Glycine max HOM05D000254 ORTHO05D000165 6.5e-10 68.6 61 52.5
Oeu059068.1 Olea europaea HOM05D000254 ORTHO05D000165 6.5e-10 68.6 127 37.0
PGR142G1242 Punica granatum HOM05D000254 ORTHO05D000165 6.5e-10 68.6 62 53.2
Lj1g0025794 Lotus japonicus HOM05D000254 ORTHO05D000165 8.4e-10 68.2 61 45.9
Lj5g0016684 Lotus japonicus HOM05D000254 ORTHO05D000165 8.4e-10 68.2 61 45.9
Oeu004087.1 Olea europaea HOM05D000254 ORTHO05D000165 8.4e-10 68.2 64 50.0
Oeu007944.1 Olea europaea HOM05D000254 ORTHO05D000165 8.4e-10 68.2 86 44.2
Hund22828 Selenicereus undatus HOM05D000254 ORTHO05D000165 8.4e-10 68.2 69 43.5
AUR62039605 Chenopodium quinoa HOM05D052022 ORTHO05D031004 1.1e-09 67.8 75 44.0
Oeu010375.1 Olea europaea HOM05D000254 ORTHO05D000165 1.1e-09 67.8 62 51.6
Oeu037332.1 Olea europaea HOM05D000254 ORTHO05D000165 1.1e-09 67.8 86 44.2
Hund01117 Selenicereus undatus HOM05D000254 ORTHO05D000165 1.1e-09 67.8 69 43.5
Hund22477 Selenicereus undatus HOM05D000254 ORTHO05D000165 1.9e-09 67.0 69 43.5
CSS0044872 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.5e-09 66.6 74 44.6
CSS0045922 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.5e-09 66.6 78 46.2
THA.LOC104799914 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 3.2e-09 66.2 79 44.3
CSS0016186 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.2e-09 65.9 65 47.7
Oeu007107.1 Olea europaea HOM05D000254 ORTHO05D000165 4.2e-09 65.9 84 42.9
Hund14883 Selenicereus undatus HOM05D000254 ORTHO05D000165 4.2e-09 65.9 69 43.5
CSS0016575 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.5e-09 65.5 65 47.7
Thhalv10024135m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 5.5e-09 65.5 65 49.2
Thhalv10028186m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 5.5e-09 65.5 65 49.2
THA.LOC104827337 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 5.5e-09 65.5 65 47.7
THA.LOC104827361 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 5.5e-09 65.5 65 47.7
arahy.Tifrunner.gnm1.ann1.82PA6C Arachis hypogaea HOM05D000254 ORTHO05D008475 7.1e-09 65.1 62 50.0
arahy.Tifrunner.gnm1.ann1.M2LGX7 Arachis hypogaea HOM05D000254 ORTHO05D000165 7.1e-09 65.1 62 50.0
TWI38G0087 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 7.1e-09 65.1 137 30.7
Thhalv10027556m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 9.3e-09 64.7 65 49.2
FvH4_3g23261 Fragaria vesca HOM05D000254 ORTHO05D000165 9.3e-09 64.7 95 37.9
FvH4_3g33391 Fragaria vesca HOM05D000254 ORTHO05D000165 9.3e-09 64.7 95 40.0
Oeu024488.1 Olea europaea HOM05D000254 ORTHO05D000165 1.6e-08 63.9 86 41.9
Oeu053798.1 Olea europaea HOM05D000254 ORTHO05D000165 1.6e-08 63.9 86 41.9
TPR.G22178 Trifolium pratense HOM05D000254 ORTHO05D000165 2.1e-08 63.5 65 44.6
AT2G06541 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 2.7e-08 63.2 134 30.6
arahy.Tifrunner.gnm1.ann1.A30LRN Arachis hypogaea HOM05D000254 ORTHO05D000165 2.7e-08 63.2 127 33.1
arahy.Tifrunner.gnm1.ann1.B9TG8T Arachis hypogaea HOM05D000254 ORTHO05D000165 2.7e-08 63.2 61 50.8
Oeu014787.1 Olea europaea HOM05D000254 ORTHO05D000165 2.7e-08 63.2 84 41.7
Oeu027308.1 Olea europaea HOM05D000254 ORTHO05D000165 2.7e-08 63.2 62 46.8
Oeu046850.1 Olea europaea HOM05D000254 ORTHO05D000165 2.7e-08 63.2 62 46.8
Hund19195 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.7e-08 63.2 69 42.0
MD12G1083800 Malus domestica HOM05D000254 ORTHO05D000165 3.5e-08 62.8 65 44.6
Oeu010359.1 Olea europaea HOM05D000254 ORTHO05D000165 3.5e-08 62.8 58 48.3
TPR.G32976 Trifolium pratense HOM05D000254 ORTHO05D000165 3.5e-08 62.8 64 46.9
Thhalv10022584m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 4.6e-08 62.4 65 47.7
arahy.Tifrunner.gnm1.ann1.1M4KFL Arachis hypogaea HOM05D000254 ORTHO05D000165 6.1e-08 62.0 62 48.4
CSS0007203 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 6.1e-08 62.0 65 46.2
arahy.Tifrunner.gnm1.ann1.1HC2L4 Arachis hypogaea HOM05D000254 ORTHO05D000165 7.9e-08 61.6 101 37.6
arahy.Tifrunner.gnm1.ann1.AW8RS1 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.0e-07 61.2 101 37.6
arahy.Tifrunner.gnm1.ann1.XL1WEB Arachis hypogaea HOM05D000254 ORTHO05D000165 1.0e-07 61.2 101 37.6
Thhalv10002275m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.0e-07 61.2 65 44.6
Lj3g0023514 Lotus japonicus HOM05D000254 ORTHO05D000165 1.0e-07 61.2 68 42.6
Oeu046483.1 Olea europaea HOM05D000254 ORTHO05D000165 1.0e-07 61.2 71 42.3
Thhalv10015783m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.3e-07 60.8 94 36.2
Lj6g0025209 Lotus japonicus HOM05D000254 ORTHO05D000165 1.3e-07 60.8 62 43.5
Ah.00g000220 Amaranthus hybridus HOM05D000254 ORTHO05D000165 1.8e-07 60.5 62 46.8
Glyma.03G160800 Glycine max HOM05D000254 ORTHO05D000165 1.8e-07 60.5 72 40.3
Glyma.10G093700 Glycine max HOM05D000254 ORTHO05D000165 1.8e-07 60.5 149 30.2
Oeu004483.1 Olea europaea HOM05D000254 ORTHO05D000165 1.8e-07 60.5 62 46.8
Oeu026773.1 Olea europaea HOM05D000254 ORTHO05D000165 1.8e-07 60.5 62 46.8
TWI74G0369 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.8e-07 60.5 70 47.1
Ah.08g211160 Amaranthus hybridus HOM05D000254 ORTHO05D000165 2.3e-07 60.1 62 46.8
Ah.11g042400 Amaranthus hybridus HOM05D000254 ORTHO05D000165 2.3e-07 60.1 58 50.0
arahy.Tifrunner.gnm1.ann1.FDGJ35 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.3e-07 60.1 65 44.6
FvH4_7g16871 Fragaria vesca HOM05D000254 ORTHO05D000165 2.3e-07 60.1 65 43.1
Lj6g0003945 Lotus japonicus HOM05D000254 ORTHO05D000165 2.3e-07 60.1 62 43.5
PSO144G0153 Papaver somniferum HOM05D000254 ORTHO05D000165 2.3e-07 60.1 65 41.5
THA.LOC104817106 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 2.3e-07 60.1 65 46.2
Aqoxy2G02304 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 3.0e-07 59.7 114 37.7
arahy.Tifrunner.gnm1.ann1.9Z3MNM Arachis hypogaea HOM05D000254 ORTHO05D000165 3.0e-07 59.7 81 39.5
CSS0018203 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 3.0e-07 59.7 65 44.6
Ciclev10000580m.g Citrus clementina HOM05D000254 ORTHO05D000165 3.0e-07 59.7 70 40.0
SGA_v2.0_scaffold38G15060 Striga asiatica HOM05D000254 ORTHO05D000165 3.0e-07 59.7 65 43.1
TPR.G16720 Trifolium pratense HOM05D000254 ORTHO05D000165 3.0e-07 59.7 65 43.1
TPR.G8531 Trifolium pratense HOM05D000254 ORTHO05D000165 3.0e-07 59.7 96 40.6
arahy.Tifrunner.gnm1.ann1.KJ3LKA Arachis hypogaea HOM05D000254 ORTHO05D000165 3.9e-07 59.3 63 44.4
arahy.Tifrunner.gnm1.ann1.L6HU1S Arachis hypogaea HOM05D000254 ORTHO05D000165 3.9e-07 59.3 101 37.6
arahy.Tifrunner.gnm1.ann1.Q3MTCJ Arachis hypogaea HOM05D000254 ORTHO05D000165 3.9e-07 59.3 81 38.3
arahy.Tifrunner.gnm1.ann1.S64W8T Arachis hypogaea HOM05D000254 ORTHO05D000165 3.9e-07 59.3 101 36.6
arahy.Tifrunner.gnm1.ann1.T4IM50 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.9e-07 59.3 81 38.3
Ciclev10013753m.g Citrus clementina HOM05D000254 ORTHO05D000165 3.9e-07 59.3 74 41.9
Glyma.01G009100 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.01G024100 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.02G075400 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.02G075500 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.02G163400 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.03G059500 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.04G172200 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.07G188300 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.08G271300 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.09G092200 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.10G132701 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.10G133300 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.10G133400 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.11G185400 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.13G203500 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.15G026200 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.15G258000 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.17G071500 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.17G162400 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.17G230400 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.18G099300 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.18G180700 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.18G214900 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
Glyma.U036600 Glycine max HOM05D000254 ORTHO05D000165 3.9e-07 59.3 64 43.8
arahy.Tifrunner.gnm1.ann1.H07TP5 Arachis hypogaea HOM05D000254 ORTHO05D000165 5.1e-07 58.9 120 31.7
Lj5g0002707 Lotus japonicus HOM05D000254 ORTHO05D000165 5.1e-07 58.9 62 41.9
SGA_v2.0_scaffold219G42580 Striga asiatica HOM05D000254 ORTHO05D000165 5.1e-07 58.9 65 43.1
TPR.G3195 Trifolium pratense HOM05D000254 ORTHO05D000165 5.1e-07 58.9 44 54.5
Atru.chr11.748 Acer truncatum HOM05D000030 ORTHO05D000031 6.7e-07 58.5 65 46.2
AT1G19260 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 6.7e-07 58.5 65 43.1
arahy.Tifrunner.gnm1.ann1.26WXUQ Arachis hypogaea HOM05D000254 ORTHO05D000165 6.7e-07 58.5 101 35.6
arahy.Tifrunner.gnm1.ann1.HH8KKF Arachis hypogaea HOM05D000254 ORTHO05D000165 6.7e-07 58.5 65 41.5
arahy.Tifrunner.gnm1.ann1.KPKP47 Arachis hypogaea HOM05D000254 ORTHO05D000165 6.7e-07 58.5 65 44.6
CANSAT01G2927 Cannabis sativa HOM05D000254 ORTHO05D000165 6.7e-07 58.5 75 40.0
Glyma.09G085100 Glycine max HOM05D000254 ORTHO05D000165 6.7e-07 58.5 64 43.8
LjContig00066g0000967 Lotus japonicus HOM05D000254 ORTHO05D000165 6.7e-07 58.5 68 42.6
Oeu003644.1 Olea europaea HOM05D000254 ORTHO05D000165 6.7e-07 58.5 80 40.0
Oeu029385.1 Olea europaea HOM05D000254 ORTHO05D000165 6.7e-07 58.5 62 41.9
Oeu035617.1 Olea europaea HOM05D000254 ORTHO05D000165 6.7e-07 58.5 71 43.7
PSO782G5171 Papaver somniferum HOM05D000254 ORTHO05D000165 6.7e-07 58.5 104 34.6
TPR.G18474 Trifolium pratense HOM05D000254 ORTHO05D000165 6.7e-07 58.5 134 29.1
CANSAT78G1301 Cannabis sativa HOM05D000254 ORTHO05D000165 8.7e-07 58.2 73 38.4
Oeu059570.1 Olea europaea HOM05D000254 ORTHO05D000165 8.7e-07 58.2 62 43.5
PSO339G4772 Papaver somniferum HOM05D000254 ORTHO05D000165 8.7e-07 58.2 65 40.0
PSO782G1155 Papaver somniferum HOM05D000254 ORTHO05D000165 8.7e-07 58.2 75 36.0
Oeu037735.1 Olea europaea HOM05D000254 ORTHO05D000165 1.1e-06 57.8 62 45.2
PSO170G5876 Papaver somniferum HOM05D000254 ORTHO05D000165 1.1e-06 57.8 63 42.9
CANSAT01G2015 Cannabis sativa HOM05D000254 ORTHO05D000165 1.5e-06 57.4 78 39.7
arahy.Tifrunner.gnm1.ann1.NAGQ02 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.9e-06 57.0 65 40.0
BolC4t24868H Brassica oleracea HOM05D000254 ORTHO05D000165 1.9e-06 57.0 66 40.9
Oeu016858.1 Olea europaea HOM05D000254 ORTHO05D000165 1.9e-06 57.0 71 43.7
PSO384G2300 Papaver somniferum HOM05D000254 ORTHO05D000165 1.9e-06 57.0 75 36.0
SGA_v2.0_scaffold8G04504 Striga asiatica HOM05D000254 ORTHO05D000165 1.9e-06 57.0 107 30.8
arahy.Tifrunner.gnm1.ann1.ZHV4UG Arachis hypogaea HOM05D000254 ORTHO05D000165 2.5e-06 56.6 81 37.0
Oeu051221.1 Olea europaea HOM05D000254 ORTHO05D000165 2.5e-06 56.6 71 42.3
PSO170G0893 Papaver somniferum HOM05D000254 ORTHO05D000165 2.5e-06 56.6 71 36.6
PSO339G0258 Papaver somniferum HOM05D000254 ORTHO05D000165 2.5e-06 56.6 96 32.3
arahy.Tifrunner.gnm1.ann1.05US20 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.3e-06 56.2 65 43.1
Glyma.14G102400 Glycine max HOM05D000254 ORTHO05D000165 3.3e-06 56.2 64 42.2
PSO170G0697 Papaver somniferum HOM05D000254 ORTHO05D000165 3.3e-06 56.2 65 41.5
AT3G29763 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 4.3e-06 55.8 54 46.3
Oeu037412.2 Olea europaea HOM05D004986 ORTHO05D005898 4.3e-06 55.8 65 47.7
PSO266G0029 Papaver somniferum HOM05D000254 ORTHO05D000165 4.3e-06 55.8 67 41.8
arahy.Tifrunner.gnm1.ann1.EX3VTY Arachis hypogaea HOM05D000254 ORTHO05D000165 5.7e-06 55.5 63 41.3
CANSAT01G2760 Cannabis sativa HOM05D000254 ORTHO05D000165 5.7e-06 55.5 73 37.0
Ciclev10013968m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.7e-06 55.5 65 38.5
Lj3g0010857 Lotus japonicus HOM05D000254 ORTHO05D000165 5.7e-06 55.5 62 41.9
Oeu028032.1 Olea europaea HOM05D000254 ORTHO05D000165 5.7e-06 55.5 70 42.9
Oeu055846.1 Olea europaea HOM05D000254 ORTHO05D000165 5.7e-06 55.5 65 46.2
PSO017G4069 Papaver somniferum HOM05D000254 ORTHO05D000165 5.7e-06 55.5 102 33.3
PSO421G0293 Papaver somniferum HOM05D000254 ORTHO05D000165 5.7e-06 55.5 102 33.3
PGR083G2518 Punica granatum HOM05D000254 ORTHO05D000165 5.7e-06 55.5 62 45.2
QL09p051711 Quercus lobata HOM05D000254 ORTHO05D000165 5.7e-06 55.5 71 36.6
AT1G42710 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 7.4e-06 55.1 132 29.5
arahy.Tifrunner.gnm1.ann1.XYIH8A Arachis hypogaea HOM05D000254 ORTHO05D000165 7.4e-06 55.1 79 36.7
Glyma.06G110300 Glycine max HOM05D000254 ORTHO05D000165 7.4e-06 55.1 66 40.9
Oeu015426.2 Olea europaea HOM05D000254 ORTHO05D000165 7.4e-06 55.1 65 46.2
Ah.15g097690 Amaranthus hybridus HOM05D000254 ORTHO05D000165 9.7e-06 54.7 61 37.7
CSS0010411 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 9.7e-06 54.7 65 38.5
CSS0014803 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 9.7e-06 54.7 65 38.5
PSO210G7789 Papaver somniferum HOM05D000254 ORTHO05D000165 9.7e-06 54.7 81 34.6


User provided reference genes

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