Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17714 Trifolium pratense HOM05D006169 ORTHO05D007698 2.9e-102 375.2 180 100.0
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 4.8e-97 357.8 180 93.9
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 8.4e-94 347.1 180 91.7
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 9.3e-93 343.6 180 89.4
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 1.3e-89 333.2 191 83.8
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 3.6e-89 331.6 180 85.6
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 4.8e-89 331.3 178 85.4
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 6.2e-89 330.9 180 85.6
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 8.1e-89 330.5 177 86.4
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 1.1e-88 330.1 176 87.5
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 1.8e-88 329.3 176 86.4
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 4.0e-88 328.2 178 86.0
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 4.0e-88 328.2 180 84.4
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 5.3e-88 327.8 177 84.7
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 5.3e-88 327.8 180 83.9
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 6.9e-88 327.4 181 86.2
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 6.9e-88 327.4 180 83.9
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 9.0e-88 327.0 180 84.4
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 1.5e-87 326.2 178 85.4
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 1.5e-87 326.2 180 83.3
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 2.0e-87 325.9 176 85.8
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 2.0e-87 325.9 180 84.4
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 2.0e-87 325.9 176 86.4
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 2.6e-87 325.5 177 85.3
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 3.4e-87 325.1 179 83.2
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 4.5e-87 324.7 177 85.9
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 5.8e-87 324.3 176 86.4
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 5.8e-87 324.3 177 84.2
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 5.8e-87 324.3 177 84.7
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 9.9e-87 323.6 177 84.7
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 1.7e-86 322.8 176 85.8
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 3.8e-86 321.6 176 85.8
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 3.8e-86 321.6 176 85.8
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 3.8e-86 321.6 177 83.6
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 3.8e-86 321.6 180 82.2
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 4.9e-86 321.2 180 81.7
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 6.4e-86 320.9 179 82.7
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 8.4e-86 320.5 177 83.1
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 1.1e-85 320.1 179 83.2
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 1.1e-85 320.1 177 84.7
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 1.1e-85 320.1 177 83.1
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 1.1e-85 320.1 176 85.2
FAN14G4015 Fragaria x ananassa HOM05D006169 ORTHO05D007698 7.1e-85 317.4 171 86.0
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 2.1e-84 315.8 178 81.5
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 2.7e-84 315.5 180 81.1
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 6.0e-84 314.3 180 81.1
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 5.1e-83 311.2 180 81.1
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 8.7e-83 310.5 196 76.5
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 1.9e-82 309.3 180 81.1
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 3.3e-82 308.5 181 81.8
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 3.3e-82 308.5 184 78.8
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 9.6e-82 307.0 177 79.1
AUR62005238 Chenopodium quinoa HOM05D006169 ORTHO05D007698 2.1e-81 305.8 170 81.2
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 2.8e-81 305.4 177 79.1
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 6.2e-81 304.3 177 80.2
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 8.1e-81 303.9 176 80.1
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 8.1e-81 303.9 178 78.1
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 1.1e-80 303.5 178 79.8
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 1.8e-80 302.8 210 70.5
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 2.4e-80 302.4 177 78.5
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 3.1e-80 302.0 177 79.1
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 6.9e-80 300.8 180 77.2
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 2.0e-79 299.3 194 73.7
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 2.6e-79 298.9 177 78.0
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 4.5e-79 298.1 177 78.0
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 4.5e-79 298.1 177 78.0
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 4.5e-79 298.1 178 78.1
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 5.8e-79 297.7 177 78.0
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 7.6e-79 297.4 180 76.1
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 1.0e-78 297.0 177 77.4
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 2.2e-78 295.8 177 78.0
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 4.9e-78 294.7 172 79.7
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 7.1e-77 290.8 186 74.7
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 5.1e-75 284.6 177 72.9
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 6.7e-75 284.3 191 72.3
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 1.9e-74 282.7 180 74.4
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 9.6e-74 280.4 169 78.1
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 6.9e-72 274.2 180 74.4
CDE11G0042 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 2.9e-70 268.9 202 64.4
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 6.5e-70 267.7 177 73.4
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 8.5e-70 267.3 177 71.2
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 8.5e-70 267.3 178 70.2
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 8.5e-70 267.3 181 71.3
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 3.2e-69 265.4 180 71.1
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 9.3e-69 263.8 159 79.2
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 6.1e-68 261.2 168 74.4
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 7.9e-68 260.8 180 68.9
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 7.9e-68 260.8 168 76.2
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 3.3e-66 255.4 176 67.6
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 4.3e-66 255.0 179 72.1
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 1.1e-64 250.4 169 73.4
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 1.4e-64 250.0 180 68.9
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 5.3e-64 248.1 137 83.9
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 9.1e-64 247.3 225 58.2
Mapoly0065s0090 Marchantia polymorpha HOM05D006169 ORTHO05D007698 3.8e-62 241.9 178 62.9
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 1.4e-61 240.0 151 76.2
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 3.9e-59 231.9 137 78.1
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 5.7e-58 228.0 111 94.6
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 1.7e-57 226.5 111 93.7
Nitab4.5_0000005g0540 Nicotiana tabacum HOM05D006169 ORTHO05D007698 3.1e-56 222.2 141 75.9
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 1.5e-55 219.9 114 86.8
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 1.3e-54 216.9 111 89.2
Cre12.g508350 Chlamydomonas reinhardtii HOM05D006169 ORTHO05D007698 6.5e-54 214.5 178 56.7
Glyma.20G237950 Glycine max HOM05D006169 ORTHO05D007698 6.5e-54 214.5 117 86.3
CBR_g8203 Chara braunii HOM05D006169 ORTHO05D007698 1.6e-52 209.9 196 53.1
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 2.7e-52 209.1 142 69.0
SMO358G0244 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 2.0e-50 203.0 176 52.3
VMungo0720G2022 Vigna mungo HOM05D006169 ORTHO05D007698 1.9e-45 186.4 170 60.6
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 3.1e-40 169.1 86 90.7
arahy.Tifrunner.gnm1.ann1.91HID7 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.7e-38 163.3 81 92.6
MCO01G635 Micromonas commoda HOM05D006169 ORTHO05D007698 6.5e-38 161.4 178 46.6
arahy.Tifrunner.gnm1.ann1.Z5NCG3 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.9e-37 159.8 81 91.4
TAR365G0132 Trochodendron aralioides HOM05D002548 ORTHO05D003031 3.0e-35 152.5 103 67.0
arahy.Tifrunner.gnm1.ann1.W0CMT4 Arachis hypogaea HOM05D006169 ORTHO05D007698 5.2e-35 151.8 76 92.1
PGSC0003DMG400043741 Solanum tuberosum HOM05D006169 ORTHO05D007698 1.2e-31 140.6 117 60.7
RcHm_v2.0_Chr1g0332671 Rosa chinensis HOM05D006169 ORTHO05D007698 1.5e-29 133.7 69 87.0
SMO117G0309 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 8.0e-28 127.9 118 44.1
arahy.Tifrunner.gnm1.ann1.CWA5R2 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.4e-24 117.1 58 91.4
PRCOL_00000586 Prasinoderma coloniale HOM05D006169 ORTHO05D007698 1.4e-24 117.1 182 36.3
CSS0040457 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 5.7e-18 95.1 51 86.3
arahy.Tifrunner.gnm1.ann1.C5NY6B Arachis hypogaea HOM05D006169 ORTHO05D007698 1.8e-16 90.1 64 67.2
arahy.Tifrunner.gnm1.ann1.4I5A07 Arachis hypogaea HOM05D000158 ORTHO05D003614 3.2e-16 89.4 45 86.7
arahy.Tifrunner.gnm1.ann1.GNZ56J Arachis hypogaea HOM05D006169 ORTHO05D007698 5.0e-14 82.0 44 79.5
Sabra13G0011100 Salix brachista HOM05D006169 ORTHO05D007698 1.6e-07 60.5 76 46.1


User provided reference genes

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