Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17632 Trifolium pratense HOM05D003216 ORTHO05D002268 4.1e-71 271.2 125 100.0
TPR.G27562 Trifolium pratense HOM05D003216 ORTHO05D002268 3.4e-62 241.5 118 94.1
TPR.G32043 Trifolium pratense HOM05D003216 ORTHO05D002268 4.7e-59 231.1 114 93.9
TPR.G16425 Trifolium pratense HOM05D003216 ORTHO05D002268 9.1e-55 216.9 117 88.9
TPR.G40729 Trifolium pratense HOM05D003216 ORTHO05D002268 1.6e-46 189.5 113 77.9
TPR.G30694 Trifolium pratense HOM05D003216 ORTHO05D002268 3.6e-35 151.8 72 95.8
TPR.G38697 Trifolium pratense HOM05D003216 ORTHO05D002268 1.5e-33 146.4 64 96.9
Medtr8g446690 Medicago truncatula HOM05D003216 ORTHO05D002268 1.6e-30 136.3 117 53.0
Medtr2g461120 Medicago truncatula HOM05D003216 ORTHO05D002268 2.9e-29 132.1 125 49.6
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 8.6e-29 130.6 103 58.3
TPR.G40026 Trifolium pratense HOM05D003216 ORTHO05D002268 8.6e-29 130.6 79 73.4
Medtr8g017510 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-28 130.2 114 53.5
TPR.G36380 Trifolium pratense HOM05D003216 ORTHO05D002268 2.8e-27 125.6 119 51.3
Medtr4g132765 Medicago truncatula HOM05D003216 ORTHO05D002268 6.1e-27 124.4 114 50.9
Medtr1g064700 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-26 123.2 114 52.6
Medtr2g061890 Medicago truncatula HOM05D003216 ORTHO05D002268 2.3e-26 122.5 114 49.1
Medtr3g032550 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-25 119.8 118 46.6
Medtr8g040220 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-25 119.4 134 41.0
Medtr6g035400 Medicago truncatula HOM05D003216 ORTHO05D002268 4.4e-25 118.2 114 49.1
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 5.8e-25 117.9 104 52.9
TPR.G38871 Trifolium pratense HOM05D003216 ORTHO05D002268 7.5e-25 117.5 117 49.6
Medtr3g014480 Medicago truncatula HOM05D003216 ORTHO05D002268 9.8e-25 117.1 118 45.8
TPR.G20309 Trifolium pratense HOM05D003216 ORTHO05D002268 9.8e-25 117.1 117 50.4
Medtr6g084230 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-24 116.7 114 50.9
Medtr8g468040 Medicago truncatula HOM05D003216 ORTHO05D002268 1.7e-24 116.3 114 47.4
TPR.G9575 Trifolium pratense HOM05D003216 ORTHO05D009933 4.9e-24 114.8 118 44.9
Medtr4g113170 Medicago truncatula HOM05D003216 ORTHO05D002268 8.3e-24 114.0 96 51.0
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 8.3e-24 114.0 120 45.8
Medtr7g004990 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-23 113.6 114 48.2
TPR.G14425 Trifolium pratense HOM05D003216 ORTHO05D002268 1.4e-23 113.2 117 48.7
TPR.G22805 Trifolium pratense HOM05D003216 ORTHO05D002268 1.4e-23 113.2 97 53.6
Medtr7g069450 Medicago truncatula HOM05D003216 ORTHO05D002268 2.4e-23 112.5 106 44.3
Medtr1g051465 Medicago truncatula HOM05D003216 ORTHO05D002268 5.4e-23 111.3 120 45.0
Medtr4g065057 Medicago truncatula HOM05D003216 ORTHO05D002268 5.4e-23 111.3 120 45.0
Medtr7g029645 Medicago truncatula HOM05D003216 ORTHO05D002268 5.4e-23 111.3 120 45.8
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 7.0e-23 110.9 120 43.3
TPR.G31202 Trifolium pratense HOM05D009380 ORTHO05D009933 7.0e-23 110.9 98 52.0
TPR.G28022 Trifolium pratense HOM05D003216 ORTHO05D002268 9.2e-23 110.5 117 47.0
Medtr3g437080 Medicago truncatula HOM05D003216 ORTHO05D002268 1.2e-22 110.2 80 55.0
TPR.G22718 Trifolium pratense HOM05D003216 ORTHO05D002268 1.2e-22 110.2 117 47.9
Medtr1g035110 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-22 109.4 120 44.2
Medtr0325s0020 Medicago truncatula HOM05D003444 ORTHO05D003963 1.0e-21 107.1 88 51.1
TPR.G35306 Trifolium pratense HOM05D003216 ORTHO05D002268 1.0e-21 107.1 105 49.5
Medtr8g020437 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-21 106.7 122 44.3
TPR.G14065 Trifolium pratense HOM05D003216 ORTHO05D002268 1.3e-21 106.7 121 45.5
Medtr5g018790 Medicago truncatula HOM05D003216 ORTHO05D002268 1.7e-21 106.3 120 43.3
Medtr7g024793 Medicago truncatula HOM05D003216 ORTHO05D002268 1.7e-21 106.3 85 51.8
TPR.G8192 Trifolium pratense HOM05D003216 ORTHO05D002268 3.9e-21 105.1 99 47.5
TPR.G20359 Trifolium pratense HOM05D003216 ORTHO05D002268 2.5e-20 102.4 111 45.9
Medtr1g016820 Medicago truncatula HOM05D003216 ORTHO05D002268 4.3e-20 101.7 120 42.5
TPR.G14047 Trifolium pratense HOM05D003216 ORTHO05D002268 5.6e-20 101.3 121 43.8
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 7.3e-20 100.9 113 45.1
TPR.G17160 Trifolium pratense HOM05D003216 ORTHO05D002268 1.2e-19 100.1 120 43.3
Medtr5g039360 Medicago truncatula HOM05D003216 ORTHO05D002268 1.6e-19 99.8 79 57.0
TPR.G25329 Trifolium pratense HOM05D009380 ORTHO05D009933 4.7e-19 98.2 85 52.9
TPR.G8656 Trifolium pratense HOM05D003216 ORTHO05D002268 6.2e-19 97.8 99 45.5
TPR.G22845 Trifolium pratense HOM05D003216 ORTHO05D002268 8.0e-19 97.4 99 44.4
Medtr5g037560 Medicago truncatula HOM05D003216 ORTHO05D002268 5.2e-18 94.7 81 53.1
TPR.G40558 Trifolium pratense HOM05D003216 ORTHO05D002268 5.2e-18 94.7 121 42.1
Medtr2g067680 Medicago truncatula HOM05D003216 ORTHO05D002268 6.8e-18 94.4 109 42.2
Medtr7g056013 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-16 90.1 86 46.5
Medtr3g087410 Medicago truncatula HOM05D003216 ORTHO05D002268 1.7e-16 89.7 114 43.0
TPR.G31505 Trifolium pratense HOM05D003216 ORTHO05D002268 2.9e-16 89.0 99 43.4
Medtr4g048540 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-15 87.0 81 48.1
Medtr1g101180 Medicago truncatula HOM05D003216 ORTHO05D002268 2.4e-15 85.9 132 35.6
Medtr1g111720 Medicago truncatula HOM05D003216 ORTHO05D002268 4.1e-15 85.1 111 38.7
Medtr2g101530 Medicago truncatula HOM05D003216 ORTHO05D002268 2.1e-14 82.8 75 49.3
Medtr8g409330 Medicago truncatula HOM05D003216 ORTHO05D002268 2.1e-14 82.8 120 37.5
Medtr2g461930 Medicago truncatula HOM05D003216 ORTHO05D002268 3.5e-14 82.0 100 45.0
TPR.G7282 Trifolium pratense HOM05D003216 ORTHO05D002268 4.6e-14 81.6 59 64.4
Medtr6g089230 Medicago truncatula HOM05D003216 ORTHO05D004526 1.7e-13 79.7 67 50.7
TPR.G754 Trifolium pratense HOM05D003216 ORTHO05D002268 1.7e-13 79.7 59 62.7
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 3.9e-13 78.6 102 40.2
Medtr2g067910 Medicago truncatula HOM05D003216 ORTHO05D002268 5.1e-13 78.2 89 42.7
Medtr8g465330 Medicago truncatula HOM05D003216 ORTHO05D002268 5.1e-13 78.2 98 38.8
Medtr8g463980 Medicago truncatula HOM05D003216 ORTHO05D002268 6.6e-13 77.8 77 44.2
Medtr2g436740 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-12 76.6 55 56.4
Medtr5g032220 Medicago truncatula HOM05D000593 ORTHO05D000562 3.3e-12 75.5 96 38.5
Medtr6g084295 Medicago truncatula HOM05D003216 ORTHO05D002268 7.3e-12 74.3 67 47.8
Ca_10000_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 2.1e-11 72.8 104 39.4
Medtr1g024975 Medicago truncatula HOM05D003216 ORTHO05D002268 2.8e-11 72.4 68 45.6
Medtr7g095760 Medicago truncatula HOM05D003216 ORTHO05D002268 2.8e-11 72.4 114 36.0
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.8e-11 72.4 96 38.5
Medtr8g465250 Medicago truncatula HOM05D003216 ORTHO05D002268 4.7e-11 71.6 61 47.5
TPR.G17165 Trifolium pratense HOM05D003216 ORTHO05D002268 6.2e-11 71.2 75 42.7
Medtr3g463860 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-10 70.5 133 34.6
Rhsim01G0176400 Rhododendron simsii HOM05D003216 ORTHO05D002268 1.4e-10 70.1 101 35.6
Rhsim06G0090900 Rhododendron simsii HOM05D003216 ORTHO05D002268 1.4e-10 70.1 101 35.6
Lj6A78T35 Lonicera japonica HOM05D000011 ORTHO05D002639 1.8e-10 69.7 126 33.3
Medtr6g086765 Medicago truncatula HOM05D003216 ORTHO05D002268 1.8e-10 69.7 74 47.3
Medtr3g104445 Medicago truncatula HOM05D003216 ORTHO05D002268 5.8e-09 64.7 81 37.0
CSS0013543 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 7.5e-09 64.3 95 35.8
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 1.3e-08 63.5 103 32.0
Ca_14741_v3 Cicer arietinum L. HOM05D003326 ORTHO05D001185 1.7e-08 63.2 91 35.2
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 2.2e-08 62.8 113 33.6
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 2.2e-08 62.8 113 33.6
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 3.7e-08 62.0 110 35.5
PSO210G1587 Papaver somniferum HOM05D003216 ORTHO05D002268 4.9e-08 61.6 116 31.9
Ca_11910_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 6.4e-08 61.2 111 32.4
PSO729G0006 Papaver somniferum HOM05D013875 ORTHO05D002268 8.3e-08 60.8 104 35.6
Medtr3g044770 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-07 60.1 46 58.7
Medtr4g014760 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-07 60.1 58 43.1
Aqoxy1G00859 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 1.9e-07 59.7 117 31.6
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.9e-07 59.7 117 31.6
Ca_14497_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.9e-07 59.7 111 31.5
Ca_25321_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.9e-07 59.7 98 31.6
Aqoxy3G00378 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 2.4e-07 59.3 118 34.7
Medtr4g066180 Medicago truncatula HOM05D003216 ORTHO05D002268 5.4e-07 58.2 55 49.1
PSO339G0458 Papaver somniferum HOM05D000593 ORTHO05D002268 7.1e-07 57.8 116 31.0
RcHm_v2.0_Chr7g0206281 Rosa chinensis HOM05D000593 ORTHO05D002268 7.1e-07 57.8 85 35.3
Medtr4g088830 Medicago truncatula HOM05D003216 ORTHO05D002268 1.2e-06 57.0 59 47.5
Atru.chr1.3004 Acer truncatum HOM05D000593 ORTHO05D002268 1.6e-06 56.6 108 32.4
Ca_11017_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.6e-06 56.6 112 29.5
Medtr4g019660 Medicago truncatula HOM05D003216 ORTHO05D002268 2.7e-06 55.8 59 44.1
FvH4_6g12551 Fragaria vesca HOM05D000593 ORTHO05D002268 3.5e-06 55.5 111 31.5
FvH4_6g38841 Fragaria vesca HOM05D003216 ORTHO05D002268 3.5e-06 55.5 98 34.7
Medtr7g057780 Medicago truncatula HOM05D003216 ORTHO05D002268 3.5e-06 55.5 44 50.0
TPR.G17604 Trifolium pratense HOM05D003216 ORTHO05D002268 3.5e-06 55.5 40 67.5
Medtr7g024450 Medicago truncatula HOM05D003216 ORTHO05D002268 4.6e-06 55.1 81 32.1
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 4.6e-06 55.1 49 53.1


User provided reference genes

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