Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17541 Trifolium pratense HOM05D000188 ORTHO05D036749 4.7e-233 810.8 412 100.0
Medtr7g055900 Medicago truncatula HOM05D000188 ORTHO05D036749 8.5e-49 198.7 346 37.3
TPR.G34761 Trifolium pratense HOM05D000188 ORTHO05D000362 1.2e-23 115.2 349 32.1
Psat7g086560 Pisum sativum HOM05D000188 ORTHO05D000362 3.0e-22 110.5 379 30.1
TPR.G34757 Trifolium pratense HOM05D000188 ORTHO05D000362 8.8e-22 109.0 359 30.6
Glyma.05G135000 Glycine max HOM05D000188 ORTHO05D000362 7.5e-21 105.9 360 29.7
Ca_18215_v3 Cicer arietinum L. HOM05D000188 ORTHO05D000362 7.0e-19 99.4 349 29.2
TPR.G34758 Trifolium pratense HOM05D000188 ORTHO05D000362 3.5e-18 97.1 364 29.4
Ciclev10004116m.g Citrus clementina HOM05D000188 ORTHO05D000362 5.9e-18 96.3 349 27.8
Lj4g0001732 Lotus japonicus HOM05D000188 ORTHO05D000362 5.9e-18 96.3 369 29.3
Lj4g0002300 Lotus japonicus HOM05D000188 ORTHO05D000362 1.0e-17 95.5 364 27.5
Cc00_g00880 Coffea canephora HOM05D000188 ORTHO05D000362 1.3e-17 95.1 267 27.0
Lj3g0010382 Lotus japonicus HOM05D000188 ORTHO05D000362 2.2e-17 94.4 369 28.5
FvH4_5g34990 Fragaria vesca HOM05D000188 ORTHO05D000362 3.8e-17 93.6 298 26.8
TPR.G1318 Trifolium pratense HOM05D000188 ORTHO05D000362 3.8e-17 93.6 339 28.9
MELO3C022590.2 Cucumis melo HOM05D000188 ORTHO05D000362 1.9e-16 91.3 346 26.0
Lj3A657T32 Lonicera japonica HOM05D000188 ORTHO05D000362 1.9e-16 91.3 319 27.9
TAR629G2785 Trochodendron aralioides HOM05D000188 ORTHO05D000362 4.2e-16 90.1 291 29.2
Cfa015099 Carpinus fangiana HOM05D000188 ORTHO05D000362 5.5e-16 89.7 365 27.4
arahy.Tifrunner.gnm1.ann1.Z2UJXV Arachis hypogaea HOM05D000188 ORTHO05D000362 7.2e-16 89.4 341 27.6
CsaV3_5G012510 Cucumis sativus L. HOM05D000188 ORTHO05D000362 1.6e-15 88.2 313 28.4
RcHm_v2.0_Chr4g0445991 Rosa chinensis HOM05D000188 ORTHO05D000362 2.1e-15 87.8 339 25.1
Lalb_Chr07g0188121 Lupinus albus HOM05D000188 ORTHO05D000362 2.7e-15 87.4 297 30.3
Sed0007900 Sechium edule HOM05D000188 ORTHO05D000362 1.4e-14 85.1 363 27.5
CSS0033497 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D000362 1.8e-14 84.7 359 27.0
arahy.Tifrunner.gnm1.ann1.F3M97M Arachis hypogaea HOM05D000188 ORTHO05D000362 2.3e-14 84.3 340 27.9
CiPaw.05G204500 Carya illinoinensis HOM05D000188 ORTHO05D000362 3.0e-14 84.0 359 27.0
CiPaw.05G203700 Carya illinoinensis HOM05D000188 ORTHO05D000362 4.0e-14 83.6 367 26.4
MD09G1275500 Malus domestica HOM05D000188 ORTHO05D000362 4.0e-14 83.6 365 26.6
Migut.G01070 Erythranthe guttata HOM05D000188 ORTHO05D000362 5.2e-14 83.2 372 25.0
RcHm_v2.0_Chr3g0486171 Rosa chinensis HOM05D000188 ORTHO05D000362 5.2e-14 83.2 300 26.7
TAR629G3173 Trochodendron aralioides HOM05D000188 ORTHO05D000362 6.8e-14 82.8 264 26.5
Lj3A854T78 Lonicera japonica HOM05D000188 ORTHO05D000362 8.8e-14 82.4 284 27.5
Prupe.1G087400 Prunus persica HOM05D000188 ORTHO05D000362 8.8e-14 82.4 300 27.7
Oeu050340.1 Olea europaea HOM05D000188 ORTHO05D000362 1.2e-13 82.0 356 26.7
Duzib251G0302 Durio zibethinus HOM05D000188 ORTHO05D000362 1.5e-13 81.6 237 30.4
MD13G1010700 Malus domestica HOM05D000188 ORTHO05D000362 1.5e-13 81.6 342 26.6
Migut.G00994 Erythranthe guttata HOM05D000188 ORTHO05D000362 2.0e-13 81.3 369 26.6
Lj3A854T82 Lonicera japonica HOM05D000188 ORTHO05D000362 5.7e-13 79.7 304 27.6
Lj5g0000050 Lotus japonicus HOM05D000188 ORTHO05D000362 5.7e-13 79.7 268 30.2
Migut.D01164 Erythranthe guttata HOM05D000188 ORTHO05D000362 7.5e-13 79.3 387 26.4
Eucgr.G02032 Eucalyptus grandis HOM05D000188 ORTHO05D000362 7.5e-13 79.3 352 26.7
Ciclev10006899m.g Citrus clementina HOM05D000188 ORTHO05D000362 9.8e-13 79.0 319 28.2
Cfa010603 Carpinus fangiana HOM05D000188 ORTHO05D000362 1.3e-12 78.6 270 27.8
Dinv07692 Davidia involucrata HOM05D000188 ORTHO05D000362 2.2e-12 77.8 373 26.8
vmacro10782 Vaccinium macrocarpon HOM05D000188 ORTHO05D000362 2.2e-12 77.8 327 27.5
Cc03_g10830 Coffea canephora HOM05D000188 ORTHO05D000362 2.8e-12 77.4 321 27.4
QL03p041555 Quercus lobata HOM05D000188 ORTHO05D000362 2.8e-12 77.4 234 29.9
TAR629G2408 Trochodendron aralioides HOM05D000188 ORTHO05D000362 2.8e-12 77.4 378 25.4
CSS0020365 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D000362 3.7e-12 77.0 354 27.1
Cfa010600 Carpinus fangiana HOM05D000188 ORTHO05D000362 4.8e-12 76.6 359 23.4
Cfa010606 Carpinus fangiana HOM05D000188 ORTHO05D000362 4.8e-12 76.6 316 27.8
ClCG11G000790 Citrullus lanatus HOM05D000188 ORTHO05D000362 6.3e-12 76.3 314 27.4
Haze_01574 Corylus avellana HOM05D000188 ORTHO05D000362 6.3e-12 76.3 306 25.2
Dinv28142 Davidia involucrata HOM05D000188 ORTHO05D000362 6.3e-12 76.3 358 26.5
Dinv28140 Davidia involucrata HOM05D000188 ORTHO05D000362 1.1e-11 75.5 329 27.4
Eucgr.G02005 Eucalyptus grandis HOM05D000188 ORTHO05D000362 1.8e-11 74.7 350 26.6
GSVIVG01010254001 Vitis vinifera HOM05D000188 ORTHO05D000362 1.8e-11 74.7 355 25.4
CiPaw.05G204300 Carya illinoinensis HOM05D000188 ORTHO05D000362 2.4e-11 74.3 323 24.8
QL03p041633 Quercus lobata HOM05D000188 ORTHO05D000362 2.4e-11 74.3 352 24.4
CiPaw.05G203800 Carya illinoinensis HOM05D000188 ORTHO05D000362 3.1e-11 73.9 315 26.0
DCAR_023516 Daucus carota HOM05D000188 ORTHO05D000362 4.1e-11 73.6 345 25.2
Migut.G00992 Erythranthe guttata HOM05D000188 ORTHO05D000362 4.1e-11 73.6 344 25.9
QL03p041845 Quercus lobata HOM05D000188 ORTHO05D000362 4.1e-11 73.6 355 25.6
Ciclev10007179m.g Citrus clementina HOM05D000188 ORTHO05D000362 7.0e-11 72.8 395 24.3
Migut.G00811 Erythranthe guttata HOM05D000188 ORTHO05D000362 7.0e-11 72.8 388 25.8
Medtr5g080800 Medicago truncatula HOM05D000188 ORTHO05D000362 7.0e-11 72.8 257 29.6
QL03p041773 Quercus lobata HOM05D000188 ORTHO05D000362 7.0e-11 72.8 330 26.1
Ciclev10004119m.g Citrus clementina HOM05D000188 ORTHO05D000362 9.1e-11 72.4 307 25.4
PGR031G2074 Punica granatum HOM05D000188 ORTHO05D000362 9.1e-11 72.4 326 26.4
CiPaw.05G204600 Carya illinoinensis HOM05D000188 ORTHO05D000362 1.2e-10 72.0 322 24.8
CANSAT78G0070 Cannabis sativa HOM05D000188 ORTHO05D000362 1.6e-10 71.6 348 23.9
Lj6A725T109 Lonicera japonica HOM05D000188 ORTHO05D000362 1.6e-10 71.6 344 23.8
PGR031G3985 Punica granatum HOM05D000188 ORTHO05D000362 1.6e-10 71.6 327 26.9
Rhsim06G0167800 Rhododendron simsii HOM05D000188 ORTHO05D000362 2.0e-10 71.2 336 25.3
Sopen12g006950 Solanum pennellii HOM05D000188 ORTHO05D000362 2.7e-10 70.9 365 24.7
COL.COLO4_27516 Corchorus olitorius HOM05D000188 ORTHO05D000362 3.5e-10 70.5 278 27.0
Haze_03536 Corylus avellana HOM05D000188 ORTHO05D000362 3.5e-10 70.5 316 27.8
PSO170G6200 Papaver somniferum HOM05D000188 ORTHO05D000362 3.5e-10 70.5 346 24.3
TPR.G3332 Trifolium pratense HOM05D000188 ORTHO05D000362 3.5e-10 70.5 401 25.4
PSO017G2686 Papaver somniferum HOM05D000188 ORTHO05D000362 4.5e-10 70.1 347 23.9
Potri.008G142960 Populus trichocarpa HOM05D000188 ORTHO05D000362 4.5e-10 70.1 242 26.0
Potri.008G143000 Populus trichocarpa HOM05D000188 ORTHO05D000362 4.5e-10 70.1 242 26.0
COL.COLO4_27519 Corchorus olitorius HOM05D000188 ORTHO05D000362 5.9e-10 69.7 328 25.3
Migut.G00809 Erythranthe guttata HOM05D000188 ORTHO05D000362 5.9e-10 69.7 347 25.9
Eucgr.G01999 Eucalyptus grandis HOM05D000188 ORTHO05D000362 7.7e-10 69.3 242 30.2
Peaxi162Scf00126g00322 Petunia axillaris HOM05D000188 ORTHO05D000362 7.7e-10 69.3 244 29.1
MBI03_g36881_MAGBIO Magnolia biondii HOM05D000188 ORTHO05D000362 1.0e-09 68.9 312 25.6
ClCG11G000900 Citrullus lanatus HOM05D000188 ORTHO05D000362 2.2e-09 67.8 306 26.8
Migut.H01287 Erythranthe guttata HOM05D000188 ORTHO05D000362 3.8e-09 67.0 390 25.4
RcHm_v2.0_Chr4g0445961 Rosa chinensis HOM05D000188 ORTHO05D000362 3.8e-09 67.0 243 28.0
Sed0005128 Sechium edule HOM05D000188 ORTHO05D000362 3.8e-09 67.0 350 24.3
CSS0036392 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D000362 5.0e-09 66.6 220 27.7
Nn4g24868 Nelumbo nucifera HOM05D000188 ORTHO05D000362 5.0e-09 66.6 350 25.4
TWI77G0333 Tripterygium wilfordii HOM05D000188 ORTHO05D000362 5.0e-09 66.6 249 28.5
Ciclev10004118m.g Citrus clementina HOM05D000188 ORTHO05D000362 6.5e-09 66.2 317 27.4
Duzib251G0449 Durio zibethinus HOM05D000188 ORTHO05D000362 6.5e-09 66.2 354 24.9
Eucgr.G01996 Eucalyptus grandis HOM05D000188 ORTHO05D000362 6.5e-09 66.2 241 29.9
FvH4_4g36180 Fragaria vesca HOM05D000188 ORTHO05D000362 6.5e-09 66.2 348 24.7
QL03p041715 Quercus lobata HOM05D000188 ORTHO05D000362 6.5e-09 66.2 287 27.5
vmacro08701 Vaccinium macrocarpon HOM05D000188 ORTHO05D000362 6.5e-09 66.2 252 27.0
Potri.008G143450 Populus trichocarpa HOM05D000188 ORTHO05D000362 8.5e-09 65.9 241 24.5
Prupe.8G106200 Prunus persica HOM05D000188 ORTHO05D000362 8.5e-09 65.9 241 28.2
MSTRG.9762 Avicennia marina HOM05D000188 ORTHO05D000362 1.5e-08 65.1 358 22.6
Dinv17113 Davidia involucrata HOM05D000188 ORTHO05D000362 1.5e-08 65.1 338 25.4
CSS0027220 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D000362 2.5e-08 64.3 328 24.1
FvH4_4g36221 Fragaria vesca HOM05D000188 ORTHO05D000362 2.5e-08 64.3 305 25.6
CANSAT78G1684 Cannabis sativa HOM05D000188 ORTHO05D000362 3.2e-08 63.9 311 26.4
CANSAT78G1486 Cannabis sativa HOM05D000188 ORTHO05D000362 5.5e-08 63.2 276 26.1
PSO210G2555 Papaver somniferum HOM05D000188 ORTHO05D000362 5.5e-08 63.2 266 27.1
QL03p041700 Quercus lobata HOM05D000188 ORTHO05D000362 7.2e-08 62.8 245 26.9
CSS0005608 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D000362 9.5e-08 62.4 328 23.8
Nitab4.5_0004775g0050 Nicotiana tabacum HOM05D000188 ORTHO05D000362 3.6e-07 60.5 216 27.3
Nitab4.5_0003150g0010 Nicotiana tabacum HOM05D000188 ORTHO05D000362 8.0e-07 59.3 218 26.6
EL10Ac1g00542 Beta vulgaris HOM05D000188 ORTHO05D000362 1.0e-06 58.9 350 25.1
Cfa021027 Carpinus fangiana HOM05D000188 ORTHO05D000362 1.0e-06 58.9 211 26.5
TPR.G25080 Trifolium pratense HOM05D000188 ORTHO05D000362 1.0e-06 58.9 133 34.6
Eucgr.G02020 Eucalyptus grandis HOM05D000188 ORTHO05D000362 2.3e-06 57.8 243 28.8
QL03p011450 Quercus lobata HOM05D000188 ORTHO05D000362 3.0e-06 57.4 317 22.7
CANSAT78G2131 Cannabis sativa HOM05D000188 ORTHO05D000362 5.2e-06 56.6 239 27.2
Manes.02G203150 Manihot esculenta HOM05D000188 ORTHO05D000362 5.2e-06 56.6 270 25.6
Medtr0189s0030 Medicago truncatula HOM05D000188 ORTHO05D000362 5.2e-06 56.6 194 27.8
Aqoxy3G02619 Aquilegia oxysepala HOM05D000188 ORTHO05D000362 6.8e-06 56.2 355 23.9


User provided reference genes

Program Settings