Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1751 Trifolium pratense HOM05D003216 ORTHO05D002268 5.6e-98 360.9 180 100.0
TPR.G1696 Trifolium pratense HOM05D009380 ORTHO05D009933 9.3e-77 290.4 159 91.2
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 5.7e-58 228.0 127 89.0
TPR.G14425 Trifolium pratense HOM05D003216 ORTHO05D002268 1.2e-44 183.7 134 68.7
TPR.G25329 Trifolium pratense HOM05D009380 ORTHO05D009933 9.7e-42 174.1 130 65.4
TPR.G31202 Trifolium pratense HOM05D009380 ORTHO05D009933 8.2e-41 171.0 119 68.9
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 1.9e-37 159.8 136 60.3
TPR.G36380 Trifolium pratense HOM05D003216 ORTHO05D002268 7.0e-32 141.4 122 56.6
TPR.G17604 Trifolium pratense HOM05D003216 ORTHO05D002268 1.2e-28 130.6 102 60.8
TPR.G30425 Trifolium pratense HOM05D003216 ORTHO05D002268 6.8e-27 124.8 98 62.2
TPR.G35306 Trifolium pratense HOM05D003216 ORTHO05D002268 8.3e-25 117.9 64 92.2
TPR.G17160 Trifolium pratense HOM05D003216 ORTHO05D002268 9.5e-21 104.4 107 49.5
TPR.G8656 Trifolium pratense HOM05D003216 ORTHO05D002268 3.6e-20 102.4 106 51.9
TPR.G9575 Trifolium pratense HOM05D003216 ORTHO05D009933 8.9e-19 97.8 159 40.9
TPR.G14065 Trifolium pratense HOM05D003216 ORTHO05D002268 2.0e-18 96.7 80 53.8
TPR.G19405 Trifolium pratense HOM05D003216 ORTHO05D002268 2.6e-18 96.3 90 48.9
TPR.G29741 Trifolium pratense HOM05D000593 ORTHO05D002268 1.1e-16 90.9 107 47.7
TPR.G754 Trifolium pratense HOM05D003216 ORTHO05D002268 2.7e-15 86.3 99 46.5
TPR.G7282 Trifolium pratense HOM05D003216 ORTHO05D002268 1.3e-14 84.0 99 45.5
Medtr6g035400 Medicago truncatula HOM05D003216 ORTHO05D002268 3.0e-14 82.8 108 38.9
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 6.6e-14 81.6 88 45.5
Medtr1g023090 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-13 80.9 88 46.6
Medtr4g015450 Medicago truncatula HOM05D003216 ORTHO05D010126 1.2e-12 77.4 80 43.8
Medtr5g060540 Medicago truncatula HOM05D003216 ORTHO05D002268 1.2e-12 77.4 100 40.0
TPR.G31505 Trifolium pratense HOM05D003216 ORTHO05D002268 1.6e-12 77.0 44 88.6
Medtr5g063910 Medicago truncatula HOM05D003216 ORTHO05D002268 3.6e-12 75.9 87 43.7
Medtr5g028280 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-11 73.9 81 42.0
Medtr5g039360 Medicago truncatula HOM05D003216 ORTHO05D002268 3.1e-11 72.8 85 43.5
TPR.G39548 Trifolium pratense HOM05D003216 ORTHO05D002268 4.0e-11 72.4 73 45.2
Medtr3g014480 Medicago truncatula HOM05D003216 ORTHO05D002268 6.8e-11 71.6 84 38.1
Medtr1g101180 Medicago truncatula HOM05D003216 ORTHO05D002268 8.9e-11 71.2 99 37.4
Medtr3g072200 Medicago truncatula HOM05D003216 ORTHO05D002268 8.9e-11 71.2 84 38.1
Medtr3g437080 Medicago truncatula HOM05D003216 ORTHO05D002268 8.9e-11 71.2 79 40.5
Medtr2g436740 Medicago truncatula HOM05D003216 ORTHO05D002268 1.2e-10 70.9 134 33.6
Medtr3g032550 Medicago truncatula HOM05D003216 ORTHO05D002268 3.4e-10 69.3 80 38.8
Medtr6g059570 Medicago truncatula HOM05D003216 ORTHO05D002268 3.4e-10 69.3 100 35.0
Medtr2g034775 Medicago truncatula HOM05D003216 ORTHO05D002268 4.4e-10 68.9 84 38.1
Medtr3g044770 Medicago truncatula HOM05D003216 ORTHO05D002268 5.8e-10 68.6 95 37.9
Medtr3g087410 Medicago truncatula HOM05D003216 ORTHO05D002268 5.8e-10 68.6 86 39.5
Medtr5g017770 Medicago truncatula HOM05D003216 ORTHO05D002268 7.5e-10 68.2 79 39.2
TPR.G11014 Trifolium pratense HOM05D009380 ORTHO05D009933 9.8e-10 67.8 32 100.0
Medtr2g461930 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-09 67.4 94 33.0
Medtr8g028025 Medicago truncatula HOM05D003216 ORTHO05D002268 2.2e-09 66.6 103 35.9
Medtr4g113170 Medicago truncatula HOM05D003216 ORTHO05D002268 2.9e-09 66.2 80 38.8
Medtr2g066190 Medicago truncatula HOM05D003216 ORTHO05D002268 3.7e-09 65.9 97 35.1
Medtr2g461120 Medicago truncatula HOM05D003216 ORTHO05D002268 3.7e-09 65.9 93 34.4
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 3.7e-09 65.9 97 36.1
Medtr7g033500 Medicago truncatula HOM05D003216 ORTHO05D002268 3.7e-09 65.9 92 37.0
Medtr8g017510 Medicago truncatula HOM05D003216 ORTHO05D002268 3.7e-09 65.9 75 40.0
Medtr8g020437 Medicago truncatula HOM05D003216 ORTHO05D002268 3.7e-09 65.9 96 36.5
Medtr1g103800 Medicago truncatula HOM05D003216 ORTHO05D002268 4.9e-09 65.5 97 34.0
Medtr4g048540 Medicago truncatula HOM05D003216 ORTHO05D002268 6.4e-09 65.1 101 34.7
Medtr8g468040 Medicago truncatula HOM05D003216 ORTHO05D002268 6.4e-09 65.1 104 36.5
Medtr6g004370 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-08 64.3 95 33.7
Medtr6g059580 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-08 64.3 95 33.7
Medtr1g051465 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-08 63.9 92 37.0
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-08 63.9 97 35.1
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-08 63.9 92 38.0
Medtr6g059590 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-08 63.9 95 34.7
Medtr6g084230 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-08 63.9 75 38.7
Medtr1g015680 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-08 63.5 92 37.0
Medtr1g016820 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-08 63.5 97 35.1
Medtr5g045990 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-08 63.5 97 38.1
Medtr8g463980 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-08 63.5 93 37.6
TPR.G953 Trifolium pratense HOM05D003216 ORTHO05D002268 2.4e-08 63.2 71 47.9
Medtr8g463970 Medicago truncatula HOM05D003216 ORTHO05D002268 3.2e-08 62.8 93 36.6
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 3.2e-08 62.8 107 29.9
TPR.G28022 Trifolium pratense HOM05D003216 ORTHO05D002268 3.2e-08 62.8 46 63.0
Medtr7g069450 Medicago truncatula HOM05D003216 ORTHO05D002268 4.1e-08 62.4 64 39.1
TPR.G22718 Trifolium pratense HOM05D003216 ORTHO05D002268 4.1e-08 62.4 46 63.0
Medtr2g061890 Medicago truncatula HOM05D003216 ORTHO05D002268 7.0e-08 61.6 74 41.9
Medtr6g008490 Medicago truncatula HOM05D003216 ORTHO05D002268 7.0e-08 61.6 77 41.6
Medtr0700s0010 Medicago truncatula HOM05D003216 ORTHO05D002268 9.2e-08 61.2 58 43.1
Ca_15409_v3 Cicer arietinum L. HOM05D000768 ORTHO05D000665 1.2e-07 60.8 68 39.7
Ca_29880_v3 Cicer arietinum L. HOM05D000768 ORTHO05D000665 1.2e-07 60.8 68 39.7
Hma1.2p1_1172F.1_g263670 Hydrangea macrophylla HOM05D000593 ORTHO05D002268 1.6e-07 60.5 84 39.3
Medtr0325s0020 Medicago truncatula HOM05D003444 ORTHO05D003963 2.7e-07 59.7 62 38.7
Medtr1g035110 Medicago truncatula HOM05D003216 ORTHO05D002268 2.7e-07 59.7 95 35.8
Ca_11910_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 4.6e-07 58.9 60 43.3
Medtr7g055617 Medicago truncatula HOM05D003216 ORTHO05D002268 4.6e-07 58.9 92 34.8
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 7.8e-07 58.2 81 34.6
Medtr4g132765 Medicago truncatula HOM05D003216 ORTHO05D002268 7.8e-07 58.2 64 42.2
Ca_07719_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.0e-06 57.8 60 41.7
Medtr1g081010 Medicago truncatula HOM05D003216 ORTHO05D002268 1.0e-06 57.8 97 35.1
Medtr7g029645 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-06 57.4 92 33.7
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.7e-06 57.0 78 34.6
TPR.G8192 Trifolium pratense HOM05D003216 ORTHO05D002268 1.7e-06 57.0 29 93.1
Medtr1g052890 Medicago truncatula HOM05D003216 ORTHO05D004526 2.3e-06 56.6 109 33.0
Medtr5g413325 Medicago truncatula HOM05D003216 ORTHO05D002268 2.3e-06 56.6 92 33.7
CSS0028555 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.0e-06 56.2 81 30.9
TWI59G1113 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.0e-06 56.2 63 36.5
Ca_10000_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 3.9e-06 55.8 79 32.9
SGA_v2.0_scaffold162G37890 Striga asiatica HOM05D003216 ORTHO05D002268 3.9e-06 55.8 56 42.9
Medtr4g050580 Medicago truncatula HOM05D003216 ORTHO05D002268 5.0e-06 55.5 60 40.0
Medtr7g056013 Medicago truncatula HOM05D003216 ORTHO05D002268 5.0e-06 55.5 62 41.9
SGA_v2.0_scaffold126G33866 Striga asiatica HOM05D000593 ORTHO05D002268 5.0e-06 55.5 58 41.4
Gorai.005G173000 Gossypium raimondii HOM05D000593 ORTHO05D000562 8.6e-06 54.7 62 37.1
Medtr5g071980 Medicago truncatula HOM05D003216 ORTHO05D002268 8.6e-06 54.7 72 34.7


User provided reference genes

Program Settings