Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 8.8e-157 557.0 296 100.0
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 3.3e-119 432.2 241 88.8
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 2.3e-117 426.0 236 89.4
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 3.9e-112 408.7 237 86.1
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 1.2e-110 403.7 238 83.6
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 1.1e-106 390.6 245 80.0
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 2.1e-105 386.3 239 80.3
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 1.5e-103 380.2 237 78.9
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 2.5e-103 379.4 245 77.1
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 1.6e-102 376.7 234 80.8
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 8.1e-102 374.4 247 75.3
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 1.1e-101 374.0 247 75.3
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 1.4e-101 373.6 246 74.8
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.3e-101 372.9 247 74.9
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.1e-101 372.5 248 74.2
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 8.9e-101 370.9 244 75.8
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 1.2e-100 370.5 239 77.4
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 1.2e-100 370.5 247 75.3
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 9.9e-100 367.5 247 74.5
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.7e-99 366.7 249 75.5
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 6.4e-99 364.8 237 75.1
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 8.4e-99 364.4 251 73.7
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 8.4e-99 364.4 227 79.7
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.4e-98 363.6 248 74.6
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 1.9e-98 363.2 250 72.0
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 2.4e-98 362.8 253 74.7
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.2e-98 362.5 251 73.3
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 1.6e-97 360.1 248 72.6
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 2.1e-97 359.8 242 73.6
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.3e-96 357.1 246 72.8
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 1.7e-96 356.7 244 74.2
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 3.9e-96 355.5 247 72.5
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 1.1e-95 354.0 240 74.2
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 3.3e-95 352.4 247 72.5
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 4.3e-95 352.1 238 73.9
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 7.3e-95 351.3 240 72.9
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 1.2e-94 350.5 248 71.8
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 1.2e-94 350.5 245 71.4
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 3.6e-94 349.0 230 74.8
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 4.7e-94 348.6 246 71.5
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 2.4e-93 346.3 247 70.0
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 3.1e-93 345.9 248 71.4
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 5.2e-93 345.1 208 81.2
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 5.2e-93 345.1 250 70.4
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 8.9e-93 344.4 250 70.4
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 2.0e-92 343.2 239 71.1
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.6e-92 342.8 237 72.6
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 5.8e-92 341.7 237 72.2
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 3.8e-91 339.0 241 71.0
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 4.9e-91 338.6 250 69.6
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.1e-90 337.4 234 71.4
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 1.4e-90 337.0 238 71.8
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 2.4e-90 336.3 230 72.6
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 2.4e-90 336.3 235 71.9
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 3.2e-90 335.9 241 70.5
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 3.2e-90 335.9 241 69.7
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 3.2e-90 335.9 238 68.9
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 5.4e-90 335.1 242 69.4
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 7.1e-90 334.7 241 69.3
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.6e-89 333.6 221 75.6
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 2.7e-89 332.8 243 70.0
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 2.7e-89 332.8 235 70.2
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 3.5e-89 332.4 240 69.6
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 2.3e-88 329.7 241 66.8
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 3.9e-88 328.9 234 68.8
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 5.1e-88 328.6 245 66.9
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 8.7e-88 327.8 307 58.0
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 1.1e-87 327.4 296 57.4
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 1.1e-87 327.4 251 65.3
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 2.5e-87 326.2 240 68.3
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 7.3e-87 324.7 240 69.2
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 1.3e-86 323.9 221 72.4
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 3.6e-86 322.4 233 68.2
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 3.6e-86 322.4 201 77.6
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 4.8e-86 322.0 240 66.2
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 4.8e-86 322.0 234 69.2
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 8.1e-86 321.2 232 70.7
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 1.4e-85 320.5 268 62.3
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.4e-85 319.7 249 66.7
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 2.4e-85 319.7 231 69.7
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 1.2e-84 317.4 237 66.2
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 4.5e-84 315.5 236 69.1
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 1.3e-83 313.9 232 69.0
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 2.9e-83 312.8 236 65.7
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 4.9e-83 312.0 231 68.8
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 1.1e-82 310.8 234 67.5
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 1.1e-82 310.8 234 67.5
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 1.9e-82 310.1 221 69.7
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 3.2e-82 309.3 233 67.4
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 7.1e-82 308.1 241 66.4
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 7.1e-82 308.1 241 66.4
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 2.1e-81 306.6 235 66.8
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 4.6e-81 305.4 232 61.2
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.3e-80 303.9 198 74.2
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 1.8e-80 303.5 227 68.3
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 3.0e-80 302.8 198 74.7
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 1.3e-78 297.4 203 75.4
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 4.8e-78 295.4 209 69.9
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 6.9e-77 291.6 221 63.8
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 9.0e-77 291.2 221 65.2
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 1.2e-76 290.8 240 60.8
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 4.9e-75 285.4 239 61.5
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 2.1e-73 280.0 201 71.1
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 3.0e-72 276.2 141 95.7
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 2.1e-70 270.0 197 66.5
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 6.2e-70 268.5 188 68.6
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 1.5e-68 263.8 192 67.2
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 2.7e-65 253.1 215 61.4
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 5.7e-63 245.4 225 54.2
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.1e-62 243.4 268 53.4
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 6.9e-61 238.4 223 51.1
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.5e-58 229.9 145 77.2
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 2.7e-57 226.5 215 54.0
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 1.5e-55 220.7 253 47.8
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 5.3e-53 212.2 186 57.5
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 4.2e-50 202.6 196 53.6
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.3e-47 193.0 129 74.4
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 3.6e-33 146.4 187 44.4
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.3e-27 127.9 290 32.1
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 1.1e-26 124.8 211 37.0
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 9.4e-26 121.7 91 68.1
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 2.4e-21 107.1 187 38.5
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 2.9e-19 100.1 205 32.7
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 1.8e-13 80.9 49 75.5
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 3.1e-13 80.1 73 54.8
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 4.5e-12 76.3 49 73.5
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 1.2e-07 61.6 34 76.5
Cre07.g323950 Chlamydomonas reinhardtii HOM05D037152 ORTHO05D034124 9.8e-07 58.5 151 31.8


User provided reference genes

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