Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17361 Trifolium pratense HOM05D007033 ORTHO05D008770 2.7e-70 268.5 129 100.0
Glyma.03G098200 Glycine max HOM05D007033 ORTHO05D008770 2.5e-47 192.2 117 80.3
Glyma.07G123600 Glycine max HOM05D007033 ORTHO05D008770 9.4e-47 190.3 113 79.6
arahy.Tifrunner.gnm1.ann1.14YBGE Arachis hypogaea HOM05D007033 ORTHO05D008770 1.0e-45 186.8 114 78.1
arahy.Tifrunner.gnm1.ann1.GIK8C1 Arachis hypogaea HOM05D007033 ORTHO05D008770 1.0e-45 186.8 114 78.1
Lj3g0004375 Lotus japonicus HOM05D007033 ORTHO05D008770 1.0e-45 186.8 122 76.2
Psat4g215800 Pisum sativum HOM05D007033 ORTHO05D008770 1.8e-45 186.0 115 82.6
Ciclev10033075m.g Citrus clementina HOM05D007033 ORTHO05D008770 1.7e-43 179.5 119 68.9
Phvul.010G038500 Phaseolus vulgaris HOM05D007033 ORTHO05D008770 2.8e-43 178.7 113 76.1
VMungo0331G1478 Vigna mungo HOM05D007033 ORTHO05D008770 2.4e-42 175.6 113 75.2
Lalb_Chr12g0210181 Lupinus albus HOM05D007033 ORTHO05D008770 7.0e-42 174.1 108 75.0
FvH4_7g07210 Fragaria vesca HOM05D007033 ORTHO05D008770 2.0e-41 172.6 113 68.1
RcHm_v2.0_Chr1g0337311 Rosa chinensis HOM05D007033 ORTHO05D008770 2.0e-41 172.6 125 64.8
FAN03G2679 Fragaria x ananassa HOM05D007033 ORTHO05D008770 2.7e-41 172.2 113 68.1
Rhsim12G0078100 Rhododendron simsii HOM05D007033 ORTHO05D008770 3.5e-41 171.8 131 62.6
Dinv43975 Davidia involucrata HOM05D007033 ORTHO05D008770 4.5e-41 171.4 120 67.5
PGR042G3214 Punica granatum HOM05D007033 ORTHO05D008770 4.5e-41 171.4 119 65.5
FAN06G3925 Fragaria x ananassa HOM05D007033 ORTHO05D008770 5.9e-41 171.0 113 67.3
MD07G1078200 Malus domestica HOM05D007033 ORTHO05D008770 1.0e-40 170.2 114 69.3
TWI60G0127 Tripterygium wilfordii HOM05D007033 ORTHO05D008770 1.0e-40 170.2 113 68.1
AL6G28700 Arabidopsis lyrata HOM05D007033 ORTHO05D008770 1.3e-40 169.9 113 69.0
Haze_15805 Corylus avellana HOM05D007033 ORTHO05D008770 1.7e-40 169.5 120 63.3
Thecc.05G231700 Theobroma cacao HOM05D007033 ORTHO05D008770 2.2e-40 169.1 125 65.6
Gohir.D13G100400 Gossypium hirsutum HOM05D007033 ORTHO05D008770 2.9e-40 168.7 119 65.5
Gorai.013G112100 Gossypium raimondii HOM05D007033 ORTHO05D008770 2.9e-40 168.7 119 65.5
Gohir.A13G085300 Gossypium hirsutum HOM05D007033 ORTHO05D008770 3.8e-40 168.3 119 68.1
AT5G17610 Arabidopsis thaliana HOM05D007033 ORTHO05D008770 5.0e-40 167.9 117 68.4
Potri.013G073100 Populus trichocarpa HOM05D007033 ORTHO05D008770 5.0e-40 167.9 110 73.6
Carub.0006s1585 Capsella rubella HOM05D007033 ORTHO05D008770 8.5e-40 167.2 115 70.4
CARHR195570 Cardamine hirsuta HOM05D007033 ORTHO05D008770 1.1e-39 166.8 115 67.0
A02p04360 Brassica napus HOM05D007033 ORTHO05D008770 1.5e-39 166.4 114 69.3
BraA02t05400Z Brassica rapa HOM05D007033 ORTHO05D008770 1.5e-39 166.4 114 69.3
Migut.B01441 Erythranthe guttata HOM05D007033 ORTHO05D008770 1.9e-39 166.0 109 64.2
GSVIVG01011318001 Vitis vinifera HOM05D007033 ORTHO05D008770 1.9e-39 166.0 115 65.2
MD02G1238400 Malus domestica HOM05D007033 ORTHO05D008770 2.5e-39 165.6 104 73.1
Actinidia21596 Actinidia chinensis HOM05D007033 ORTHO05D008770 4.2e-39 164.9 117 65.8
Aqoxy5G03237 Aquilegia oxysepala HOM05D007033 ORTHO05D008770 4.2e-39 164.9 123 61.0
BcaC03g13530 Brassica carinata HOM05D007033 ORTHO05D008770 4.2e-39 164.9 114 68.4
BolC2t06829H Brassica oleracea HOM05D007033 ORTHO05D008770 4.2e-39 164.9 114 68.4
Nn3g19225 Nelumbo nucifera HOM05D007033 ORTHO05D008770 4.2e-39 164.9 122 67.2
C02p09210 Brassica napus HOM05D007033 ORTHO05D008770 5.5e-39 164.5 114 67.5
Prupe.2G100000 Prunus persica HOM05D007033 ORTHO05D008770 9.4e-39 163.7 111 66.7
ECA234G3633 Erigeron canadensis HOM05D007033 ORTHO05D008770 1.2e-38 163.3 109 67.0
Manes.08G157600 Manihot esculenta HOM05D007033 ORTHO05D008770 1.6e-38 162.9 120 64.2
CANSAT35G1406 Cannabis sativa HOM05D007033 ORTHO05D008770 2.1e-38 162.5 113 67.3
Cc02_g26390 Coffea canephora HOM05D007033 ORTHO05D008770 2.1e-38 162.5 117 59.8
Sp6g26610 Schrenkiella parvula HOM05D007033 ORTHO05D008770 2.1e-38 162.5 114 65.8
Hma1.2p1_0353F.1_g133340 Hydrangea macrophylla HOM05D007033 ORTHO05D008770 2.7e-38 162.2 94 74.5
Eucgr.E01772 Eucalyptus grandis HOM05D007033 ORTHO05D008770 6.1e-38 161.0 108 63.9
HanXRQChr03g0088201 Helianthus annuus HOM05D007033 ORTHO05D008770 6.1e-38 161.0 109 63.3
THA.LOC104827245 Tarenaya hassleriana HOM05D007033 ORTHO05D008770 6.1e-38 161.0 114 64.9
Thhalv10014961m.g Eutrema salsugineum HOM05D007033 ORTHO05D008770 8.0e-38 160.6 113 63.7
CDE12G0505 Ceratophyllum demersum HOM05D007033 ORTHO05D008770 1.4e-37 159.8 119 63.0
PSO782G0028 Papaver somniferum HOM05D007033 ORTHO05D008770 3.0e-37 158.7 118 59.3
PSO063G1631 Papaver somniferum HOM05D007033 ORTHO05D008770 6.8e-37 157.5 118 58.5
ClCG05G002970 Citrullus lanatus HOM05D007033 ORTHO05D008770 1.2e-36 156.8 127 59.1
Sed0003013 Sechium edule HOM05D007033 ORTHO05D008770 1.2e-36 156.8 133 58.6
Sc23g0004770 Simmondsia chinensis HOM05D007033 ORTHO05D008770 1.2e-36 156.8 101 69.3
Lsat_1_v5_gn_4_42281 Lactuca sativa HOM05D007033 ORTHO05D008770 1.5e-36 156.4 111 63.1
Cfa003682 Carpinus fangiana HOM05D007033 ORTHO05D008770 4.4e-36 154.8 138 55.1
MBI16_g43713_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 4.4e-36 154.8 89 76.4
vmacro21112 Vaccinium macrocarpon HOM05D007033 ORTHO05D008770 4.4e-36 154.8 89 73.0
EL10Ac1g00673 Beta vulgaris HOM05D007033 ORTHO05D008770 7.5e-36 154.1 111 61.3
CiPaw.02G048600 Carya illinoinensis HOM05D007033 ORTHO05D008770 7.5e-36 154.1 110 64.5
SGA_v2.0_scaffold98G29399 Striga asiatica HOM05D007033 ORTHO05D008770 9.8e-36 153.7 141 51.8
MELO3C006276.2 Cucumis melo HOM05D007033 ORTHO05D008770 1.3e-35 153.3 130 55.4
BcaC04g18775 Brassica carinata HOM05D007033 ORTHO05D008770 2.8e-35 152.1 118 60.2
C09p59560 Brassica napus HOM05D007033 ORTHO05D008770 2.8e-35 152.1 118 60.2
BolC9t58794H Brassica oleracea HOM05D007033 ORTHO05D008770 2.8e-35 152.1 118 60.2
CsaV3_3G010550 Cucumis sativus L. HOM05D007033 ORTHO05D008770 2.8e-35 152.1 130 55.4
Solyc01g081200.3 Solanum lycopersicum HOM05D007033 ORTHO05D008770 4.8e-35 151.4 118 57.6
Peaxi162Scf00592g00448 Petunia axillaris HOM05D007033 ORTHO05D008770 6.3e-35 151.0 109 57.8
CAN.G700.33 Capsicum annuum HOM05D007033 ORTHO05D008770 8.3e-35 150.6 116 58.6
Sopen01g032780 Solanum pennellii HOM05D007033 ORTHO05D008770 8.3e-35 150.6 118 57.6
PGSC0003DMG400001787 Solanum tuberosum HOM05D007033 ORTHO05D008770 5.4e-34 147.9 111 57.7
HPP92_003404 Vanilla planifolia HOM05D007033 ORTHO05D008770 7.0e-34 147.5 107 63.6
HPP92_003427 Vanilla planifolia HOM05D007033 ORTHO05D008770 9.1e-34 147.1 111 61.3
COL.COLO4_08541 Corchorus olitorius HOM05D007033 ORTHO05D008770 2.0e-33 146.0 100 69.0
Zm00001eb009070 Zea mays HOM05D007033 ORTHO05D008770 7.7e-33 144.1 125 52.0
Sabra13G0063200 Salix brachista HOM05D007033 ORTHO05D008770 2.9e-32 142.1 98 69.4
Sed0002871 Sechium edule HOM05D007033 ORTHO05D008770 2.9e-32 142.1 97 61.9
Hund17162 Selenicereus undatus HOM05D007033 ORTHO05D008770 9.5e-31 137.1 107 57.9
ATR0829G185 Amborella trichopoda HOM05D007033 ORTHO05D008770 4.7e-30 134.8 81 70.4
SalBow5G2417 Salvia bowleyana HOM05D007033 ORTHO05D008770 6.1e-30 134.4 90 66.7
MBI16_g43476_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 1.0e-29 133.7 102 61.8
Nitab4.5_0004594g0020 Nicotiana tabacum HOM05D007033 ORTHO05D008770 1.0e-29 133.7 95 64.2
AUR62014520 Chenopodium quinoa HOM05D007033 ORTHO05D008770 1.4e-29 133.3 102 61.8
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 1.4e-29 133.3 121 48.8
QL04p052404 Quercus lobata HOM05D007033 ORTHO05D008770 4.0e-29 131.7 79 69.6
AUR62038014 Chenopodium quinoa HOM05D007033 ORTHO05D008770 5.2e-29 131.3 104 60.6
Sc23g0004660 Simmondsia chinensis HOM05D007033 ORTHO05D008770 2.6e-28 129.0 105 58.1
Nitab4.5_0004800g0080 Nicotiana tabacum HOM05D007033 ORTHO05D008770 3.4e-28 128.6 100 55.0
BraA10t44240Z Brassica rapa HOM05D007033 ORTHO05D008770 1.1e-26 123.6 100 56.0
Ah.05g177250 Amaranthus hybridus HOM05D007033 ORTHO05D008770 7.0e-26 120.9 102 56.9
HPP92_025932 Vanilla planifolia HOM05D007033 ORTHO05D008770 2.7e-25 119.0 114 51.8
SEGI_14041 Sequoiadendron giganteum HOM05D007033 ORTHO05D008770 3.8e-24 115.2 94 54.3
AagrBONN_evm.TU.Sc2ySwM_368.1536 Anthoceros agrestis HOM05D007033 ORTHO05D008770 3.6e-22 108.6 79 58.2
Pp3c19_9960 Physcomitrium patens HOM05D007033 ORTHO05D008770 2.0e-20 102.8 111 44.1
A10p21800 Brassica napus HOM05D007033 ORTHO05D008770 5.7e-20 101.3 57 75.4
Mapoly0058s0110 Marchantia polymorpha HOM05D007033 ORTHO05D008770 8.3e-19 97.4 99 46.5
Pp3c7_5640 Physcomitrium patens HOM05D007033 ORTHO05D008770 1.4e-18 96.7 112 42.9
TAR629G3499 Trochodendron aralioides HOM05D007033 ORTHO05D008770 3.2e-18 95.5 57 68.4
Pp3c18_1710 Physcomitrium patens HOM05D007033 ORTHO05D008770 1.6e-17 93.2 101 43.6
SMO351G0381 Selaginella moellendorffii HOM05D007033 ORTHO05D008770 1.3e-16 90.1 105 38.1
Atru.chr2.1689 Acer truncatum HOM05D007033 ORTHO05D008770 6.6e-16 87.8 44 84.1
Sopen05g015510 Solanum pennellii HOM05D007033 ORTHO05D008770 1.5e-12 76.6 60 56.7
PRCOL_00006026 Prasinoderma coloniale HOM05D007033 ORTHO05D008770 8.6e-08 60.8 44 54.5
Peaxi162Scf00117g01735 Petunia axillaris HOM05D007033 ORTHO05D008770 4.3e-07 58.5 57 52.6
MCO10G230 Micromonas commoda HOM05D007033 ORTHO05D008770 1.6e-06 56.6 69 34.8
CBR_g44313 Chara braunii HOM05D007033 ORTHO05D008770 3.6e-06 55.5 60 41.7
CBR_g49607 Chara braunii HOM05D007033 ORTHO05D008770 4.7e-06 55.1 60 43.3


User provided reference genes

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