Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 9.0e-274 946.4 516 100.0
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 2.6e-241 838.6 495 88.1
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 6.1e-222 774.2 518 83.6
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 2.6e-204 715.7 494 77.3
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 6.4e-195 684.5 498 75.5
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 1.1e-194 683.7 495 74.5
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 2.0e-193 679.5 496 74.2
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 2.7e-193 679.1 496 74.8
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 4.6e-193 678.3 498 74.1
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 6.2e-190 667.9 389 87.9
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 1.5e-188 663.3 496 73.0
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 1.5e-188 663.3 496 73.0
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 2.9e-139 499.6 494 59.7
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 1.8e-136 490.3 498 58.6
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 1.9e-135 486.9 496 57.3
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 2.2e-134 483.4 494 57.5
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 2.8e-134 483.0 496 57.7
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 1.1e-133 481.1 496 57.5
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 2.6e-132 476.5 499 57.3
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 1.3e-131 474.2 491 56.6
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 1.7e-131 473.8 490 56.7
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 1.1e-130 471.1 499 56.1
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 1.4e-130 470.7 496 57.3
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 3.2e-130 469.5 498 57.0
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 4.6e-129 465.7 493 56.0
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 6.1e-129 465.3 497 55.7
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 1.7e-126 457.2 499 55.3
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.7e-126 456.1 556 51.4
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 1.1e-125 454.5 499 54.9
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 2.4e-125 453.4 499 55.1
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.1e-125 453.0 556 51.3
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 4.5e-124 449.1 557 51.2
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 1.0e-123 448.0 496 53.6
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 1.1e-122 444.5 494 55.3
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 2.5e-122 443.4 496 54.6
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 3.2e-122 443.0 501 55.5
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 8.8e-120 434.9 496 52.6
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 1.7e-118 430.6 498 53.6
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 2.8e-118 429.9 501 52.7
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 2.8e-118 429.9 556 49.8
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 7.0e-117 425.2 470 54.3
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 1.5e-116 424.1 524 52.1
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.5e-116 424.1 494 53.0
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 2.9e-115 419.9 521 51.4
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 3.2e-114 416.4 506 51.0
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 1.2e-113 414.5 497 50.7
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 3.7e-110 402.9 447 55.3
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 1.4e-109 401.0 499 50.7
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 4.1e-109 399.4 494 50.0
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 2.6e-108 396.7 499 49.3
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 5.9e-108 395.6 499 49.1
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 5.0e-107 392.5 572 46.3
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 5.0e-107 392.5 500 49.0
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 1.2e-105 387.9 492 49.8
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 2.7e-105 386.7 510 49.4
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 3.6e-105 386.3 489 49.5
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 3.3e-103 379.8 435 55.2
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 5.7e-103 379.0 513 49.1
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.7e-102 377.5 496 48.8
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 4.8e-102 375.9 497 48.5
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 6.5e-99 365.5 508 46.3
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 4.7e-97 359.4 513 45.4
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 1.2e-95 354.8 357 58.3
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 4.4e-95 352.8 502 48.4
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 2.2e-94 350.5 409 52.8
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 1.8e-93 347.4 516 45.9
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 5.4e-93 345.9 423 51.3
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 1.0e-88 331.6 439 48.3
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 1.1e-85 321.6 497 44.9
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 9.2e-85 318.5 529 41.8
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 8.6e-83 312.0 473 47.8
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 1.1e-82 311.6 501 43.5
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 2.6e-79 300.4 497 42.1
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 7.0e-77 292.4 499 42.5
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 1.2e-76 291.6 514 42.0
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 8.6e-75 285.4 406 49.3
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 4.3e-74 283.1 370 50.0
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 6.0e-68 262.7 421 45.8
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 1.5e-58 231.5 324 46.6
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 6.8e-56 222.6 256 52.0
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 1.1e-34 152.1 321 38.6
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 2.1e-33 147.9 313 39.6
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 2.1e-25 121.3 79 82.3
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 2.1e-25 121.3 251 39.0
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 1.4e-24 118.6 154 50.0
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 1.2e-23 115.5 284 37.0
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 2.0e-23 114.8 76 80.3
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 1.4e-21 108.6 198 39.9
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 1.4e-21 108.6 68 83.8
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 3.2e-21 107.5 159 40.9
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 8.7e-19 99.4 558 28.0
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 1.9e-18 98.2 53 92.5
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 2.5e-18 97.8 316 29.7
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 1.3e-14 85.5 62 59.7
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 1.4e-13 82.0 50 72.0
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 2.5e-13 81.3 62 56.5
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 9.4e-13 79.3 44 86.4
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 1.4e-11 75.5 230 36.5
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 1.5e-10 72.0 40 85.0
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 7.4e-10 69.7 61 62.3
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 7.4e-10 69.7 61 62.3
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 2.2e-06 58.2 61 50.8


User provided reference genes

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