Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 1.4e-201 706.1 357 100.0
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 3.0e-151 538.9 308 85.1
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 2.6e-147 525.8 307 83.7
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 3.9e-127 458.8 309 73.5
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 8.7e-127 457.6 309 73.8
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 1.4e-124 450.3 307 72.3
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 2.5e-121 439.5 294 72.8
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 6.9e-116 421.4 287 73.5
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 7.9e-112 407.9 283 70.7
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 7.9e-112 407.9 283 70.7
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 2.0e-86 323.6 238 68.5
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 9.2e-84 314.7 285 55.4
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 1.2e-83 314.3 289 55.7
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 2.0e-83 313.5 290 54.8
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 1.3e-82 310.8 278 56.5
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 1.1e-81 307.8 278 55.4
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 1.5e-81 307.4 285 54.4
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 3.3e-81 306.2 287 55.4
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 4.3e-81 305.8 278 55.0
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 5.6e-81 305.4 283 55.1
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 3.6e-80 302.8 280 54.6
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 4.7e-80 302.4 289 53.3
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 4.7e-80 302.4 280 53.6
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 4.7e-80 302.4 278 54.0
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 6.1e-80 302.0 290 54.5
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 1.0e-79 301.2 289 52.9
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 4.0e-79 299.3 291 54.6
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.5e-78 297.4 284 52.5
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 7.5e-78 295.0 292 51.4
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 2.2e-77 293.5 290 53.1
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 2.9e-77 293.1 306 51.6
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 8.3e-77 291.6 306 50.3
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 8.3e-77 291.6 306 50.3
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 1.6e-75 287.3 292 51.7
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 7.8e-75 285.0 284 51.1
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 7.8e-75 285.0 292 51.0
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 7.8e-75 285.0 290 50.7
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 1.3e-74 284.3 284 51.4
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 3.0e-74 283.1 287 51.2
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 3.9e-74 282.7 264 56.8
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 1.1e-73 281.2 309 47.2
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 1.9e-73 280.4 279 50.9
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 3.3e-73 279.6 277 53.1
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 3.3e-73 279.6 271 53.9
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 7.3e-73 278.5 279 51.6
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 1.2e-72 277.7 279 51.6
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 6.2e-72 275.4 277 52.7
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 8.0e-72 275.0 288 51.7
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 2.3e-71 273.5 230 58.7
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 3.1e-71 273.1 284 49.3
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 4.0e-71 272.7 291 50.2
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 5.2e-71 272.3 279 52.0
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 2.6e-70 270.0 283 51.9
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 3.4e-70 269.6 275 51.6
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 4.4e-70 269.2 271 50.2
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 4.4e-70 269.2 275 51.6
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 9.8e-70 268.1 282 51.1
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 1.3e-69 267.7 229 56.3
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 1.1e-68 264.6 289 47.4
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.2e-67 261.2 284 47.2
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 3.5e-67 259.6 249 53.8
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 1.0e-66 258.1 294 49.3
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 2.3e-66 256.9 263 49.8
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 3.0e-66 256.5 286 47.6
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 6.6e-66 255.4 275 48.7
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 1.1e-65 254.6 297 47.1
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 7.3e-65 251.9 286 47.2
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 7.3e-65 251.9 260 50.4
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 1.2e-64 251.1 289 45.7
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 4.7e-64 249.2 299 45.2
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 1.4e-63 247.7 284 47.2
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 3.1e-63 246.5 285 47.0
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 5.2e-63 245.7 286 46.9
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 1.2e-62 244.6 301 45.8
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 1.2e-62 244.6 301 45.8
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 1.5e-62 244.2 286 47.2
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 2.0e-62 243.8 230 53.0
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 2.6e-62 243.4 281 48.0
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 6.4e-61 238.8 296 45.3
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 6.4e-61 238.8 296 45.3
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 8.3e-61 238.4 293 44.7
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 1.1e-60 238.0 211 56.9
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 3.2e-60 236.5 299 44.8
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 3.2e-60 236.5 288 46.5
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 3.2e-60 236.5 272 45.6
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 5.4e-60 235.7 287 43.9
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 7.1e-60 235.3 301 42.9
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 7.1e-60 235.3 236 51.3
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 1.6e-59 234.2 291 44.7
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 2.7e-59 233.4 242 49.6
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 4.6e-59 232.6 295 42.7
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 1.6e-56 224.2 312 42.9
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 1.1e-55 221.5 176 60.8
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 2.3e-55 220.3 179 61.5
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 3.1e-55 219.9 178 59.0
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 5.2e-55 219.2 281 43.8
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 2.0e-54 217.2 290 44.5
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 2.9e-53 213.4 171 59.1
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 1.1e-52 211.5 275 42.9
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 1.4e-52 211.1 373 36.7
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 2.4e-52 210.3 220 52.3
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 1.2e-51 208.0 319 38.2
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 1.6e-51 207.6 217 47.5
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 1.6e-51 207.6 219 50.2
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 1.3e-50 204.5 175 57.1
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 6.6e-50 202.2 279 43.0
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 8.6e-50 201.8 282 44.7
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 2.1e-48 197.2 224 44.6
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 2.6e-46 190.3 189 54.0
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 2.9e-45 186.8 299 39.1
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 4.6e-43 179.5 236 43.6
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 6.0e-43 179.1 171 49.7
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 1.0e-42 178.3 286 39.5
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 6.9e-39 165.6 182 46.2
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 2.6e-38 163.7 174 47.7
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 2.5e-33 147.1 232 38.8
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 2.5e-33 147.1 144 52.1
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 1.9e-28 131.0 183 38.8
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 1.3e-26 124.8 83 63.9
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 3.9e-26 123.2 232 33.2
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 2.2e-21 107.5 228 31.6
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 6.7e-18 95.9 146 42.5
AL8G21390 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 6.5e-13 79.3 101 37.6
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 8.5e-13 79.0 121 36.4
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 7.2e-12 75.9 56 66.1
Haze_08067 Corylus avellana HOM05D005964 ORTHO05D007242 2.7e-11 73.9 91 45.1
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 2.8e-08 63.9 143 30.8
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 5.3e-07 59.7 41 56.1
Oeu042210.1 Olea europaea HOM05D005964 ORTHO05D007242 1.5e-06 58.2 43 55.8


User provided reference genes

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