Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1723 Trifolium pratense HOM05D007762 ORTHO05D008066 6.5e-123 444.1 232 100.0
Psat3g137360 Pisum sativum HOM05D007762 ORTHO05D008066 5.4e-85 318.2 233 74.2
Medtr7g062260 Medicago truncatula HOM05D007762 ORTHO05D008066 2.9e-78 295.8 234 70.9
Glyma.07G134000 Glycine max HOM05D007762 ORTHO05D008066 3.2e-53 212.6 239 54.8
Lalb_Chr19g0125241 Lupinus albus HOM05D007762 ORTHO05D008066 3.9e-51 205.7 238 52.9
Phvul.008G119100 Phaseolus vulgaris HOM05D007762 ORTHO05D008066 2.1e-49 199.9 239 52.7
Glyma.18G183600 Glycine max HOM05D007762 ORTHO05D008066 1.4e-48 197.2 239 51.9
Lj3g0025123 Lotus japonicus HOM05D007762 ORTHO05D008066 5.1e-43 178.7 239 47.3
arahy.Tifrunner.gnm1.ann1.LX2K9J Arachis hypogaea HOM05D007762 ORTHO05D008066 5.6e-42 175.3 231 48.5
Phvul.010G014900 Phaseolus vulgaris HOM05D007762 ORTHO05D008066 4.3e-34 149.1 258 43.8
arahy.Tifrunner.gnm1.ann1.NCI3TY Arachis hypogaea HOM05D007762 ORTHO05D008066 9.0e-32 141.4 200 45.5
QL07p048844 Quercus lobata HOM05D007762 ORTHO05D008066 9.7e-26 121.3 240 39.2
Cfa017354 Carpinus fangiana HOM05D007762 ORTHO05D008066 8.2e-25 118.2 256 37.5
CiPaw.09G195100 Carya illinoinensis HOM05D007762 ORTHO05D008066 1.3e-22 110.9 233 35.6
CiPaw.10G146800 Carya illinoinensis HOM05D007762 ORTHO05D008066 2.9e-22 109.8 234 36.8
Prupe.6G257800 Prunus persica HOM05D007762 ORTHO05D008066 2.9e-22 109.8 232 39.2
TAR633G0209 Trochodendron aralioides HOM05D007762 ORTHO05D008066 8.5e-22 108.2 260 37.3
RcHm_v2.0_Chr3g0466291 Rosa chinensis HOM05D007762 ORTHO05D008066 9.4e-21 104.8 263 35.7
CsaV3_3G034800 Cucumis sativus L. HOM05D007762 ORTHO05D008066 7.9e-20 101.7 261 34.5
Dinv35582 Davidia involucrata HOM05D007762 ORTHO05D008066 1.0e-19 101.3 266 33.5
GSVIVG01034144001 Vitis vinifera HOM05D007762 ORTHO05D008066 3.9e-19 99.4 251 34.7
TWI74G1309 Tripterygium wilfordii HOM05D007762 ORTHO05D008066 5.1e-19 99.0 254 33.5
MD12G1144400 Malus domestica HOM05D007762 ORTHO05D008066 1.5e-18 97.4 252 34.9
Manes.09G092000 Manihot esculenta HOM05D007762 ORTHO05D008066 5.7e-18 95.5 235 34.9
Potri.006G087300 Populus trichocarpa HOM05D007762 ORTHO05D008066 2.2e-17 93.6 257 32.3
Thecc.05G036900 Theobroma cacao HOM05D007762 ORTHO05D008066 2.8e-17 93.2 259 34.0
Gorai.001G249600 Gossypium raimondii HOM05D007762 ORTHO05D008066 4.8e-17 92.4 262 34.7
ClCG10G021240 Citrullus lanatus HOM05D007762 ORTHO05D008066 8.2e-17 91.7 258 33.7
Gohir.D13G098400 Gossypium hirsutum HOM05D007762 ORTHO05D008066 5.3e-16 89.0 256 35.9
MD04G1131300 Malus domestica HOM05D007762 ORTHO05D008066 9.1e-16 88.2 222 34.7
Sed0022945 Sechium edule HOM05D007762 ORTHO05D008066 9.1e-16 88.2 248 33.9
FAN05G0447 Fragaria x ananassa HOM05D007762 ORTHO05D008066 1.2e-15 87.8 263 32.7
Sabra06G0066600 Salix brachista HOM05D007762 ORTHO05D003096 1.2e-15 87.8 257 34.6
FvH4_6g13420 Fragaria vesca HOM05D007762 ORTHO05D008066 2.6e-15 86.7 263 31.9
FAN09G1623 Fragaria x ananassa HOM05D007762 ORTHO05D008066 2.6e-15 86.7 262 33.6
FAN14G2701 Fragaria x ananassa HOM05D007762 ORTHO05D008066 5.9e-15 85.5 263 31.9
Gohir.A13G092305 Gossypium hirsutum HOM05D007762 ORTHO05D008066 7.7e-15 85.1 251 34.3
Gohir.A13G092310 Gossypium hirsutum HOM05D007762 ORTHO05D008066 7.7e-15 85.1 251 34.3
Atru.chr8.1998 Acer truncatum HOM05D007762 ORTHO05D008066 1.3e-14 84.3 261 31.8
Duzib106G0002 Durio zibethinus HOM05D007762 ORTHO05D008066 1.7e-14 84.0 262 32.4
Dinv37157 Davidia involucrata HOM05D007762 ORTHO05D008066 5.0e-14 82.4 263 29.3
FAN02G3004 Fragaria x ananassa HOM05D007762 ORTHO05D008066 6.5e-14 82.0 262 32.4
Hma1.2p1_1889F.1_g306660 Hydrangea macrophylla HOM05D007762 ORTHO05D008066 6.5e-14 82.0 257 31.5
Hma1.2p1_2197F.1_g316916 Hydrangea macrophylla HOM05D007762 ORTHO05D008066 6.5e-14 82.0 257 31.5
Oeu023077.1 Olea europaea HOM05D007762 ORTHO05D008066 1.4e-13 80.9 259 31.3
Eucgr.K03113 Eucalyptus grandis HOM05D007762 ORTHO05D008066 3.2e-13 79.7 263 31.9
Potri.016G100100 Populus trichocarpa HOM05D007762 ORTHO05D008066 3.2e-13 79.7 231 33.8
CANSAT11G0018 Cannabis sativa HOM05D007762 ORTHO05D008066 3.6e-12 76.3 246 32.5
PGR004G1606 Punica granatum HOM05D007762 ORTHO05D008066 7.9e-12 75.1 246 31.7
Actinidia11265 Actinidia chinensis HOM05D007762 ORTHO05D008066 5.1e-11 72.4 265 30.9
vmacro20167 Vaccinium macrocarpon HOM05D007762 ORTHO05D008066 6.7e-11 72.0 260 28.8
Nitab4.5_0008097g0020 Nicotiana tabacum HOM05D007762 ORTHO05D008066 1.1e-10 71.2 264 31.1
Eucgr.A01283 Eucalyptus grandis HOM05D007762 ORTHO05D008066 2.0e-10 70.5 243 32.1
COL.COLO4_14776 Corchorus olitorius HOM05D007762 ORTHO05D008066 2.6e-10 70.1 255 31.8
Cc10_g11770 Coffea canephora HOM05D007762 ORTHO05D008066 3.3e-10 69.7 240 32.1
PGR031G1528 Punica granatum HOM05D007762 ORTHO05D008066 3.3e-10 69.7 244 32.8
Ciclev10013354m.g Citrus clementina HOM05D007762 ORTHO05D008066 4.4e-10 69.3 251 31.1
Lsat_1_v5_gn_9_33361 Lactuca sativa HOM05D007762 ORTHO05D008066 7.4e-10 68.6 225 31.6
Nitab4.5_0000527g0210 Nicotiana tabacum HOM05D007762 ORTHO05D008066 9.7e-10 68.2 264 30.7
Oeu001858.1 Olea europaea HOM05D007762 ORTHO05D008066 1.3e-09 67.8 246 31.3
MBI05_g29690_MAGBIO Magnolia biondii HOM05D007762 ORTHO05D008066 2.2e-09 67.0 237 30.4
MELO3C009249.2 Cucumis melo HOM05D007762 ORTHO05D008066 8.2e-09 65.1 232 28.4
Rhsim05G0194300 Rhododendron simsii HOM05D007762 ORTHO05D008066 8.2e-09 65.1 258 29.8
Nn2g11166 Nelumbo nucifera HOM05D007762 ORTHO05D008066 4.1e-08 62.8 250 30.4
Migut.L01955 Erythranthe guttata HOM05D007762 ORTHO05D008066 7.0e-08 62.0 231 33.8
Peaxi162Scf00330g00715 Petunia axillaris HOM05D007762 ORTHO05D008066 1.2e-07 61.2 256 28.9
Solyc10g086560.3 Solanum lycopersicum HOM05D007762 ORTHO05D008066 1.2e-07 61.2 266 31.6
Sc22g0004450 Simmondsia chinensis HOM05D007762 ORTHO05D008066 1.5e-07 60.8 231 34.2
Cc06_g02460 Coffea canephora HOM05D007762 ORTHO05D008066 3.4e-07 59.7 265 28.7
Sopen10g035940 Solanum pennellii HOM05D007762 ORTHO05D008066 1.3e-06 57.8 249 31.3
MSTRG.26781 Avicennia marina HOM05D007762 ORTHO05D008066 2.9e-06 56.6 239 31.8
THA.LOC104805538 Tarenaya hassleriana HOM05D007762 ORTHO05D008066 8.5e-06 55.1 241 28.6


User provided reference genes

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