Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 2.8e-168 595.5 374 100.0
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 1.1e-100 370.9 372 60.5
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 1.2e-89 334.3 364 53.8
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 3.8e-80 302.8 360 52.8
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 8.7e-69 265.0 373 46.4
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 3.7e-59 233.0 368 47.3
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 7.9e-54 215.3 283 48.4
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 3.0e-53 213.4 268 51.5
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 3.9e-53 213.0 372 40.1
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 3.1e-50 203.4 380 40.8
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 8.5e-48 195.3 372 38.4
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.8e-45 187.6 372 37.6
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.8e-45 187.6 372 37.6
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 2.0e-36 157.5 133 59.4
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 3.3e-36 156.8 289 37.7
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 7.4e-36 155.6 363 35.3
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 5.9e-33 146.0 157 49.7
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 1.7e-32 144.4 368 31.8
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 1.5e-31 141.4 292 36.3
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 4.2e-31 139.8 350 32.0
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.2e-30 138.3 271 37.6
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.2e-30 138.3 271 37.6
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 3.6e-30 136.7 158 47.5
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 1.8e-29 134.4 140 47.1
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 1.8e-29 134.4 143 50.3
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 6.8e-29 132.5 274 35.0
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 1.2e-28 131.7 271 34.7
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 1.5e-28 131.3 291 34.4
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 2.6e-28 130.6 152 46.1
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 4.4e-28 129.8 119 57.1
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 4.4e-28 129.8 274 34.7
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 4.4e-28 129.8 378 31.5
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 5.7e-28 129.4 119 57.1
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 7.5e-28 129.0 343 29.7
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.7e-27 127.9 156 44.2
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 1.7e-27 127.9 143 46.9
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 2.2e-27 127.5 354 28.2
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 2.2e-27 127.5 140 47.1
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 6.3e-27 125.9 143 46.2
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 8.3e-27 125.6 350 31.4
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 1.4e-26 124.8 142 46.5
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 5.3e-26 122.9 140 44.3
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 7.0e-26 122.5 143 44.8
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 9.1e-26 122.1 146 44.5
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 2.0e-25 120.9 152 42.1
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 3.5e-25 120.2 262 33.6
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 7.7e-25 119.0 261 32.6
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 1.0e-24 118.6 140 47.1
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 2.2e-24 117.5 286 33.2
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 1.5e-23 114.8 355 32.4
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 7.2e-23 112.5 362 29.3
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 1.2e-22 111.7 325 28.3
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 3.6e-22 110.2 141 44.7
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 3.6e-22 110.2 141 44.7
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 8.0e-22 109.0 353 29.2
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 8.0e-22 109.0 313 31.6
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 1.8e-21 107.8 141 43.3
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 6.8e-21 105.9 148 39.9
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 4.4e-20 103.2 143 39.9
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 1.3e-19 101.7 137 40.9
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 6.3e-19 99.4 286 30.4
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 4.1e-18 96.7 137 38.0
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 9.1e-18 95.5 145 39.3
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 1.2e-17 95.1 119 41.2
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 4.5e-17 93.2 137 38.0
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 5.0e-16 89.7 129 38.8
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 1.5e-15 88.2 114 38.6
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 3.6e-14 83.6 148 34.5
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 8.0e-14 82.4 207 30.9
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 1.8e-13 81.3 136 34.6
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 3.0e-13 80.5 73 50.7
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 3.0e-13 80.5 141 31.2
ATR0686G174 Amborella trichopoda HOM05D007857 ORTHO05D009355 8.9e-13 79.0 95 42.1
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 3.4e-12 77.0 141 35.5
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 5.7e-12 76.3 131 35.1
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 9.8e-12 75.5 140 34.3
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 4.9e-11 73.2 137 32.1
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 1.4e-10 71.6 137 31.4
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 1.4e-10 71.6 137 31.4
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 1.4e-10 71.6 137 31.4
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 1.4e-10 71.6 143 31.5
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 2.4e-10 70.9 85 45.9
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 4.1e-10 70.1 205 27.3
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 9.2e-10 68.9 108 38.0
Thhalv10019017m.g Eutrema salsugineum HOM05D010720 ORTHO05D009355 1.0e-08 65.5 139 33.1
Os04g0504700 Oryza sativa ssp. japonica HOM05D007857 ORTHO05D009355 5.6e-07 59.7 113 31.0
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 9.5e-07 58.9 64 46.9
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 1.6e-06 58.2 116 31.9
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 2.8e-06 57.4 66 42.4
Sp5g22550 Schrenkiella parvula HOM05D010720 ORTHO05D009355 2.8e-06 57.4 112 32.1
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 4.7e-06 56.6 135 28.1
ECA233G3449 Erigeron canadensis HOM05D007857 ORTHO05D009355 4.7e-06 56.6 83 37.3


User provided reference genes

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