Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 2.7e-144 515.4 269 100.0
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 5.5e-73 278.5 191 77.0
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 5.1e-71 271.9 185 77.8
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 7.2e-65 251.5 187 73.8
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 2.5e-57 226.5 161 72.7
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 6.5e-50 201.8 189 55.0
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 7.2e-49 198.4 183 56.8
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 1.6e-48 197.2 193 54.9
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 3.6e-48 196.1 187 55.1
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 4.7e-48 195.7 199 52.3
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 8.0e-48 194.9 184 54.9
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 2.3e-47 193.4 196 53.1
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 5.2e-47 192.2 247 45.3
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 8.8e-47 191.4 158 57.6
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 1.2e-46 191.0 196 52.6
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 1.7e-45 187.2 194 51.5
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 2.8e-45 186.4 181 52.5
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 3.7e-45 186.0 186 50.0
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 4.8e-45 185.7 184 50.5
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 6.3e-45 185.3 155 54.8
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 6.3e-45 185.3 191 48.2
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 1.1e-44 184.5 182 52.2
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.1e-44 184.5 184 50.0
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 1.1e-44 184.5 189 51.3
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 1.4e-44 184.1 195 50.8
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 1.8e-44 183.7 178 51.7
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 2.4e-44 183.3 198 50.5
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 2.4e-44 183.3 155 54.8
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 2.4e-44 183.3 199 46.7
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 2.4e-44 183.3 193 49.2
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 2.4e-44 183.3 167 52.1
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 3.1e-44 183.0 198 50.5
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 3.1e-44 183.0 155 54.8
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 3.1e-44 183.0 194 49.5
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 3.1e-44 183.0 181 50.3
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 3.1e-44 183.0 155 53.5
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 4.1e-44 182.6 185 53.0
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 4.1e-44 182.6 181 51.4
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 4.1e-44 182.6 181 51.4
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 5.3e-44 182.2 195 49.7
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 7.0e-44 181.8 155 54.8
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 1.2e-43 181.0 195 48.2
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 2.0e-43 180.3 192 49.5
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 2.7e-43 179.9 181 50.3
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 3.5e-43 179.5 183 47.5
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 3.5e-43 179.5 181 50.3
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 4.5e-43 179.1 196 47.4
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 4.5e-43 179.1 155 56.1
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 5.9e-43 178.7 181 50.8
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.0e-42 177.9 187 51.3
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 1.3e-42 177.6 155 54.2
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.3e-42 177.6 155 55.5
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 2.2e-42 176.8 155 56.1
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.2e-42 176.8 181 47.5
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 2.9e-42 176.4 167 52.1
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 3.8e-42 176.0 181 50.3
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 5.0e-42 175.6 197 49.2
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 5.0e-42 175.6 187 51.9
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 5.0e-42 175.6 153 52.9
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 6.5e-42 175.3 167 51.5
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 6.5e-42 175.3 194 45.4
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 8.5e-42 174.9 181 48.1
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 1.5e-41 174.1 198 49.0
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 3.2e-41 172.9 198 48.5
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 3.2e-41 172.9 198 48.5
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 3.2e-41 172.9 191 45.5
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 3.2e-41 172.9 155 53.5
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 5.5e-41 172.2 189 46.6
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 7.2e-41 171.8 182 46.2
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 9.4e-41 171.4 185 47.0
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 2.1e-40 170.2 185 44.9
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 2.7e-40 169.9 185 47.6
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 3.6e-40 169.5 185 44.3
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 3.6e-40 169.5 152 50.0
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 3.6e-40 169.5 153 51.6
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 3.6e-40 169.5 152 51.3
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 3.6e-40 169.5 185 44.3
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 4.7e-40 169.1 194 47.9
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 8.0e-40 168.3 192 49.0
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 1.0e-39 167.9 185 44.9
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.0e-39 167.9 188 45.2
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 1.4e-39 167.5 197 47.2
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 5.2e-39 165.6 189 44.4
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 5.2e-39 165.6 181 48.1
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 6.8e-39 165.2 188 44.7
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 6.8e-39 165.2 152 50.0
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 8.8e-39 164.9 170 49.4
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 1.2e-38 164.5 181 47.5
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 1.5e-38 164.1 181 47.5
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 1.5e-38 164.1 181 47.0
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 1.5e-38 164.1 157 49.7
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 2.0e-38 163.7 184 42.9
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 2.0e-38 163.7 202 44.1
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 2.6e-38 163.3 176 44.9
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 2.6e-38 163.3 181 47.0
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 2.6e-38 163.3 190 45.3
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 2.6e-38 163.3 155 51.6
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 3.4e-38 162.9 196 44.9
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 4.4e-38 162.5 151 49.7
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 7.5e-38 161.8 178 45.5
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 7.5e-38 161.8 163 49.1
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 9.8e-38 161.4 152 51.3
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 3.7e-37 159.5 181 47.0
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 4.8e-37 159.1 155 48.4
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 1.8e-36 157.1 210 41.0
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 7.0e-36 155.2 153 47.1
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 1.6e-35 154.1 173 42.2
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 2.0e-35 153.7 192 42.2
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 5.0e-34 149.1 165 43.6
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.1e-33 147.9 187 38.5
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 2.2e-29 133.7 188 41.0
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 5.6e-25 119.0 158 44.3
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 4.7e-24 115.9 82 64.6
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 4.7e-24 115.9 122 50.0
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.0e-23 114.8 149 38.9
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.4e-23 114.4 82 61.0
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 8.9e-23 111.7 163 36.2
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.5e-22 110.9 155 36.8
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.5e-22 110.9 155 36.8
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 7.5e-22 108.6 128 43.0
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 7.5e-22 108.6 111 53.2
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 1.7e-21 107.5 85 56.5
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 3.2e-20 103.2 119 42.9
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 3.4e-14 83.2 77 53.2
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 9.8e-14 81.6 73 56.2
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.2e-11 74.7 78 47.4
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 1.6e-11 74.3 73 49.3
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 4.6e-11 72.8 145 28.3
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.6e-11 72.8 105 40.0
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 3.0e-10 70.1 69 40.6
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 1.5e-09 67.8 68 45.6
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 3.3e-09 66.6 45 60.0
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 2.8e-08 63.5 57 52.6
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 2.3e-07 60.5 147 24.5


User provided reference genes

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