Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16904 Trifolium pratense HOM05D000218 ORTHO05D411056 1.1e-69 266.5 141 100.0
Medtr5g076760 Medicago truncatula HOM05D000218 ORTHO05D000125 1.3e-09 67.0 82 47.6
Medtr5g067400 Medicago truncatula HOM05D000390 ORTHO05D001192 2.9e-09 65.9 68 50.0
Medtr5g076350 Medicago truncatula HOM05D000218 ORTHO05D000125 8.5e-09 64.3 90 46.7
Medtr1g046640 Medicago truncatula HOM05D000218 ORTHO05D001192 1.9e-08 63.2 67 49.3
Medtr5g076520 Medicago truncatula HOM05D000390 ORTHO05D001192 3.2e-08 62.4 85 48.2
Medtr5g076340 Medicago truncatula HOM05D000218 ORTHO05D000125 4.2e-08 62.0 91 49.5
Medtr5g076740 Medicago truncatula HOM05D000218 ORTHO05D000125 4.2e-08 62.0 80 48.8
Medtr5g076370 Medicago truncatula HOM05D000218 ORTHO05D001192 9.4e-08 60.8 67 55.2
BcaC04g22978 Brassica carinata HOM05D000218 ORTHO05D000125 1.6e-07 60.1 68 50.0
BcaB04g18161 Brassica carinata HOM05D000218 ORTHO05D000125 2.1e-07 59.7 67 50.7
CARHR044240 Cardamine hirsuta HOM05D000218 ORTHO05D000125 2.7e-07 59.3 67 53.7
Medtr1g046650 Medicago truncatula HOM05D000218 ORTHO05D001192 2.7e-07 59.3 71 46.5
TPR.G5316 Trifolium pratense HOM05D000218 ORTHO05D001192 3.6e-07 58.9 67 49.3
Medtr5g076810 Medicago truncatula HOM05D000218 ORTHO05D001192 4.7e-07 58.5 69 47.8
AL7G44880 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 1.0e-06 57.4 67 50.7
SEGI_11773 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 1.0e-06 57.4 83 47.0
MELO3C025417.2 Cucumis melo HOM05D000218 ORTHO05D000125 1.4e-06 57.0 68 48.5
Nn3g18630 Nelumbo nucifera HOM05D000218 ORTHO05D000125 1.4e-06 57.0 85 42.4
Nn5g27756 Nelumbo nucifera HOM05D000218 ORTHO05D000125 1.4e-06 57.0 77 48.1
Ciclev10006421m.g Citrus clementina HOM05D000218 ORTHO05D000125 1.8e-06 56.6 114 36.0
Medtr7g094390 Medicago truncatula HOM05D000390 ORTHO05D001192 1.8e-06 56.6 71 45.1
PSO210G4567 Papaver somniferum HOM05D000218 ORTHO05D000125 1.8e-06 56.6 67 49.3
TPR.G6755 Trifolium pratense HOM05D000218 ORTHO05D000125 1.8e-06 56.6 73 47.9
AagrBONN_evm.TU.Sc2ySwM_368.2688 Anthoceros agrestis HOM05D000218 ORTHO05D000125 2.3e-06 56.2 68 50.0
Cc02_g31540 Coffea canephora HOM05D000218 ORTHO05D000125 3.0e-06 55.8 87 43.7
ECA233G3666 Erigeron canadensis HOM05D000218 ORTHO05D000125 3.0e-06 55.8 90 40.0
Dinv35738 Davidia involucrata HOM05D000218 ORTHO05D000125 4.0e-06 55.5 67 49.3
Gohir.A01G131900 Gossypium hirsutum HOM05D000218 ORTHO05D000125 4.0e-06 55.5 74 45.9
Gohir.D01G121000 Gossypium hirsutum HOM05D000218 ORTHO05D000125 4.0e-06 55.5 74 45.9
Medtr4g009980 Medicago truncatula HOM05D000218 ORTHO05D000125 4.0e-06 55.5 53 49.1
Sed0017253 Sechium edule HOM05D000218 ORTHO05D000125 4.0e-06 55.5 71 47.9
Manes.10G049100 Manihot esculenta HOM05D000218 ORTHO05D000125 5.2e-06 55.1 67 49.3
Os02g0161900 Oryza sativa ssp. japonica HOM05D000218 ORTHO05D000125 5.2e-06 55.1 76 44.7
RcHm_v2.0_Chr5g0037651 Rosa chinensis HOM05D000218 ORTHO05D000125 5.2e-06 55.1 76 44.7
Solyc01g068045.1 Solanum lycopersicum HOM05D000218 ORTHO05D000125 5.2e-06 55.1 77 45.5
unitig_85.g27192 Utricularia gibba HOM05D000218 ORTHO05D004247 5.2e-06 55.1 73 45.2
AagrBONN_evm.TU.Sc2ySwM_228.468 Anthoceros agrestis HOM05D000218 ORTHO05D000125 6.7e-06 54.7 68 47.1
CDE12G0931 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 6.7e-06 54.7 67 49.3
Ciclev10024476m.g Citrus clementina HOM05D000218 ORTHO05D000125 6.7e-06 54.7 78 43.6
Cc02_g31570 Coffea canephora HOM05D000218 ORTHO05D000125 6.7e-06 54.7 75 45.3
Dinv37288 Davidia involucrata HOM05D000218 ORTHO05D000125 6.7e-06 54.7 68 48.5
Lalb_Chr05g0218541 Lupinus albus HOM05D000218 ORTHO05D000125 6.7e-06 54.7 68 48.5
RcHm_v2.0_Chr5g0003941 Rosa chinensis HOM05D000218 ORTHO05D000125 6.7e-06 54.7 68 48.5
TPR.G5303 Trifolium pratense HOM05D000390 ORTHO05D001192 6.7e-06 54.7 69 50.7
CDE09G0382 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 8.8e-06 54.3 75 44.0
ClCG10G003450 Citrullus lanatus HOM05D000158 ORTHO05D000002 8.8e-06 54.3 67 47.8
Migut.F01001 Erythranthe guttata HOM05D000218 ORTHO05D000125 8.8e-06 54.3 74 44.6
Nn4g24828 Nelumbo nucifera HOM05D000218 ORTHO05D000125 8.8e-06 54.3 98 41.8
PSO229G0037 Papaver somniferum HOM05D000218 ORTHO05D000125 8.8e-06 54.3 67 49.3
TPR.G23352 Trifolium pratense HOM05D000218 ORTHO05D000125 8.8e-06 54.3 77 42.9
Zm00001eb044940 Zea mays HOM05D000218 ORTHO05D000125 8.8e-06 54.3 68 44.1


User provided reference genes

Program Settings