Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16819 Trifolium pratense HOM05D008547 ORTHO05D010515 0.0e+00 1224.5 609 100.0
Medtr8g027595 Medicago truncatula HOM05D008547 ORTHO05D010515 5.9e-123 445.7 410 58.3
Medtr8g027525 Medicago truncatula HOM05D008547 ORTHO05D010515 1.3e-122 444.5 416 58.9
Medtr5g090860 Medicago truncatula HOM05D008547 ORTHO05D010515 1.7e-122 444.1 400 59.5
TPR.G16823 Trifolium pratense HOM05D008547 ORTHO05D010515 2.9e-122 443.4 419 57.5
Psat4g161600 Pisum sativum HOM05D008547 ORTHO05D010515 5.0e-122 442.6 401 59.6
Ca_23530_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 1.1e-116 424.9 415 57.8
Medtr5g009560 Medicago truncatula HOM05D008547 ORTHO05D010515 2.6e-115 420.2 397 57.7
TPR.G39730 Trifolium pratense HOM05D008547 ORTHO05D010515 1.0e-106 391.7 414 53.6
Medtr1g102770 Medicago truncatula HOM05D008547 ORTHO05D010515 5.2e-103 379.4 369 55.0
TPR.G26111 Trifolium pratense HOM05D008547 ORTHO05D010515 2.8e-101 373.6 402 51.2
TPR.G12161 Trifolium pratense HOM05D008547 ORTHO05D010515 1.4e-100 371.3 417 53.0
Psat4g161480 Pisum sativum HOM05D008547 ORTHO05D010515 6.5e-98 362.5 365 56.2
Psat4g187360 Pisum sativum HOM05D008547 ORTHO05D010515 1.6e-91 341.3 397 48.6
Medtr5g090850 Medicago truncatula HOM05D008547 ORTHO05D010515 5.0e-90 336.3 347 56.2
Psat1g047400 Pisum sativum HOM05D008547 ORTHO05D010515 6.5e-90 335.9 377 49.6
Medtr1g017800 Medicago truncatula HOM05D008547 ORTHO05D010515 1.6e-83 314.7 376 48.9
TPR.G8333 Trifolium pratense HOM05D008547 ORTHO05D010515 1.7e-82 311.2 419 47.5
TPR.G32061 Trifolium pratense HOM05D008547 ORTHO05D010515 6.6e-82 309.3 421 45.1
Ca_17126_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 1.5e-78 298.1 442 43.4
Medtr8g065650 Medicago truncatula HOM05D008547 ORTHO05D010515 1.5e-78 298.1 408 44.9
TPR.G16818 Trifolium pratense HOM05D008547 ORTHO05D010515 3.4e-78 297.0 312 52.6
Ca_14816_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 6.4e-77 292.7 442 43.2
Ca_15416_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 3.9e-74 283.5 388 43.0
Ca_15277_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 6.6e-74 282.7 430 41.2
TPR.G27684 Trifolium pratense HOM05D008547 ORTHO05D010515 1.8e-71 274.6 352 48.0
Psat4g206720 Pisum sativum HOM05D008547 ORTHO05D010515 6.2e-64 249.6 247 57.5
Medtr6g004080 Medicago truncatula HOM05D008547 ORTHO05D010515 1.1e-63 248.8 294 49.7
Medtr3g023820 Medicago truncatula HOM05D008547 ORTHO05D010515 1.3e-58 231.9 242 54.1
TPR.G23739 Trifolium pratense HOM05D008547 ORTHO05D010515 4.0e-55 220.3 239 49.8
arahy.Tifrunner.gnm1.ann1.MSS51R Arachis hypogaea HOM05D008547 ORTHO05D010515 1.5e-46 191.8 369 34.4
arahy.Tifrunner.gnm1.ann1.72JBMR Arachis hypogaea HOM05D008547 ORTHO05D010515 3.4e-46 190.7 374 33.7
Medtr5g012050 Medicago truncatula HOM05D008547 ORTHO05D010515 5.8e-46 189.9 231 45.9
Medtr8g027530 Medicago truncatula HOM05D008547 ORTHO05D010515 2.3e-42 177.9 409 35.2
Lj2g0004475 Lotus japonicus HOM05D008547 ORTHO05D010515 5.1e-42 176.8 399 33.3
Medtr1g103170 Medicago truncatula HOM05D008547 ORTHO05D010515 4.0e-39 167.2 152 59.9
Medtr5g013160 Medicago truncatula HOM05D008547 ORTHO05D010515 5.3e-39 166.8 143 62.9
TPR.G38872 Trifolium pratense HOM05D008547 ORTHO05D010515 1.3e-37 162.2 300 40.3
TPR.G21917 Trifolium pratense HOM05D008547 ORTHO05D010515 7.4e-33 146.4 169 48.5
TPR.G33226 Trifolium pratense HOM05D011581 ORTHO05D010515 7.6e-30 136.3 82 89.0
TPR.G31853 Trifolium pratense HOM05D011581 ORTHO05D010515 1.7e-29 135.2 163 52.8
Psat4g188000 Pisum sativum HOM05D008547 ORTHO05D010515 3.9e-26 124.0 153 46.4
Medtr5g013170 Medicago truncatula HOM05D008547 ORTHO05D010515 3.7e-24 117.5 113 53.1
TPR.G7989 Trifolium pratense HOM05D008547 ORTHO05D010515 4.8e-24 117.1 128 56.2
TPR.G20414 Trifolium pratense HOM05D008547 ORTHO05D010515 2.4e-23 114.8 121 52.9
TPR.G5462 Trifolium pratense HOM05D011581 ORTHO05D004175 1.2e-22 112.5 124 56.5
TPR.G15907 Trifolium pratense HOM05D011581 ORTHO05D010515 2.2e-21 108.2 163 43.6
TPR.G7992 Trifolium pratense HOM05D008547 ORTHO05D010515 3.8e-21 107.5 120 47.5
TPR.G9477 Trifolium pratense HOM05D008547 ORTHO05D010515 7.9e-19 99.8 109 56.0
TPR.G35604 Trifolium pratense HOM05D000295 ORTHO05D000188 1.3e-18 99.0 71 73.2
TPR.G21157 Trifolium pratense HOM05D008547 ORTHO05D010515 1.1e-17 95.9 77 62.3
CSS0029898 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 2.5e-17 94.7 374 27.8
CSS0006076 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 3.3e-17 94.4 374 28.1
Dinv12850 Davidia involucrata HOM05D006664 ORTHO05D009007 7.4e-17 93.2 353 28.0
TPR.G36241 Trifolium pratense HOM05D011581 ORTHO05D010515 9.7e-17 92.8 155 43.9
TPR.G11677 Trifolium pratense HOM05D011581 ORTHO05D010515 6.3e-16 90.1 85 61.2
CSS0003999 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 2.0e-14 85.1 374 27.8
Rhsim08G0071800 Rhododendron simsii HOM05D006664 ORTHO05D009007 1.4e-12 79.0 291 26.5
TPR.G40457 Trifolium pratense HOM05D011581 ORTHO05D010515 2.1e-11 75.1 141 39.0
CiPaw.02G099600 Carya illinoinensis HOM05D006664 ORTHO05D009007 4.6e-11 73.9 396 25.3
Migut.D00751 Erythranthe guttata HOM05D006664 ORTHO05D009007 3.9e-10 70.9 381 21.5
Medtr8g027560 Medicago truncatula HOM05D008547 ORTHO05D010515 2.2e-08 65.1 76 48.7


User provided reference genes

Program Settings