Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16786 Trifolium pratense HOM05D000020 ORTHO05D000156 3.7e-35 151.0 76 100.0
Phvul.006G032800 Phaseolus vulgaris HOM05D000020 ORTHO05D000156 3.2e-18 94.7 67 71.6
Lj6g0025834 Lotus japonicus HOM05D000020 ORTHO05D000156 2.7e-17 91.7 67 73.1
Lalb_Chr04g0248801 Lupinus albus HOM05D000020 ORTHO05D000156 3.5e-17 91.3 67 71.6
arahy.Tifrunner.gnm1.ann1.VL1F08 Arachis hypogaea HOM05D000020 ORTHO05D000156 7.8e-17 90.1 63 73.0
arahy.Tifrunner.gnm1.ann1.9V629R Arachis hypogaea HOM05D000020 ORTHO05D000156 1.3e-16 89.4 67 67.2
VMungo0540G0798 Vigna mungo HOM05D000020 ORTHO05D000156 2.3e-16 88.6 67 67.2
Glyma.08G309100 Glycine max HOM05D000020 ORTHO05D000156 6.6e-16 87.0 67 67.2
VMungo0647G1469 Vigna mungo HOM05D000020 ORTHO05D000156 2.5e-15 85.1 67 62.7
Medtr5g091650 Medicago truncatula HOM05D000020 ORTHO05D000156 4.3e-15 84.3 66 69.7
Phvul.008G231700 Phaseolus vulgaris HOM05D000020 ORTHO05D000156 1.2e-14 82.8 67 64.2
Glyma.02G285300 Glycine max HOM05D000020 ORTHO05D000156 2.1e-14 82.0 68 64.7
Glyma.18G107300 Glycine max HOM05D000020 ORTHO05D000156 2.8e-14 81.6 67 67.2
Lalb_Chr10g0106661 Lupinus albus HOM05D000020 ORTHO05D000156 2.8e-14 81.6 67 65.7
TPR.G12603 Trifolium pratense HOM05D000020 ORTHO05D000156 6.2e-14 80.5 73 60.3
Glyma.14G028400 Glycine max HOM05D000020 ORTHO05D000156 1.1e-13 79.7 68 63.2
Psat2g016240 Pisum sativum HOM05D000020 ORTHO05D000156 3.1e-13 78.2 65 64.6
LjContig00310g0026063 Lotus japonicus HOM05D000020 ORTHO05D000156 6.8e-13 77.0 70 64.3
arahy.Tifrunner.gnm1.ann1.PS139N Arachis hypogaea HOM05D000020 ORTHO05D000156 4.4e-12 74.3 61 67.2
arahy.Tifrunner.gnm1.ann1.63FMKD Arachis hypogaea HOM05D000020 ORTHO05D000156 5.8e-12 73.9 55 70.9
COL.COLO4_08449 Corchorus olitorius HOM05D000244 ORTHO05D009765 3.5e-09 64.7 52 63.5
Prupe.3G173500 Prunus persica HOM05D000020 ORTHO05D000156 1.0e-08 63.2 60 60.0
QL08p044273 Quercus lobata HOM05D000020 ORTHO05D000156 5.1e-08 60.8 55 60.0
FAN02G0759 Fragaria x ananassa HOM05D002705 ORTHO05D009765 1.1e-07 59.7 44 70.5
MD17G1139000 Malus domestica HOM05D000020 ORTHO05D000156 1.1e-07 59.7 54 55.6
Ciclev10032559m.g Citrus clementina HOM05D000020 ORTHO05D000156 1.5e-07 59.3 53 56.6
FAN05G3181 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.5e-07 59.3 43 69.8
Potri.002G059600 Populus trichocarpa HOM05D000020 ORTHO05D000156 4.3e-07 57.8 56 51.8
MSTRG.14291 Avicennia marina HOM05D000020 ORTHO05D000156 7.3e-07 57.0 54 55.6
Gorai.012G041000 Gossypium raimondii HOM05D000020 ORTHO05D000156 9.6e-07 56.6 61 54.1
Thecc.01G162600 Theobroma cacao HOM05D000020 ORTHO05D000156 9.6e-07 56.6 43 69.8
TWI23G1283 Tripterygium wilfordii HOM05D000020 ORTHO05D000156 9.6e-07 56.6 40 65.0
CiPaw.03G190000 Carya illinoinensis HOM05D000020 ORTHO05D000156 1.2e-06 56.2 45 62.2
Gohir.D04G036100 Gossypium hirsutum HOM05D000020 ORTHO05D000156 1.2e-06 56.2 61 54.1
Gohir.A05G379300 Gossypium hirsutum HOM05D000020 ORTHO05D000156 2.1e-06 55.5 57 56.1
PGR042G2505 Punica granatum HOM05D000020 ORTHO05D000156 2.1e-06 55.5 41 70.7
Sabra02G0048200 Salix brachista HOM05D000020 ORTHO05D000156 2.1e-06 55.5 61 45.9
CANSAT64G2185 Cannabis sativa HOM05D000020 ORTHO05D000156 2.8e-06 55.1 55 58.2
Peaxi162Scf00111g00127 Petunia axillaris HOM05D000020 ORTHO05D000156 2.8e-06 55.1 66 51.5
RcHm_v2.0_Chr2g0151601 Rosa chinensis HOM05D000020 ORTHO05D000156 3.6e-06 54.7 62 48.4
Sopen07g029670 Solanum pennellii HOM05D000020 ORTHO05D000156 3.6e-06 54.7 64 43.8
Manes.02G084600 Manihot esculenta HOM05D000020 ORTHO05D000156 4.7e-06 54.3 69 43.5
Atru.chr6.2085 Acer truncatum HOM05D000020 ORTHO05D000156 6.2e-06 53.9 62 46.8
Sed0018230 Sechium edule HOM05D000020 ORTHO05D000156 6.2e-06 53.9 48 60.4
Potri.005G202400 Populus trichocarpa HOM05D000020 ORTHO05D000156 8.1e-06 53.5 38 65.8


User provided reference genes

Program Settings