Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16775 Trifolium pratense HOM05D000042 ORTHO05D044788 7.1e-37 156.8 79 100.0
Psat5g197560 Pisum sativum HOM05D000042 ORTHO05D000028 4.0e-24 114.4 61 93.4
Ca_18595_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000028 8.7e-19 96.7 61 85.2
Medtr3g452380 Medicago truncatula HOM05D000042 ORTHO05D000028 1.9e-18 95.5 64 84.4
Glyma.18G105800 Glycine max HOM05D000042 ORTHO05D000028 1.6e-17 92.4 62 77.4
Phvul.006G034300 Phaseolus vulgaris HOM05D000042 ORTHO05D000028 3.6e-17 91.3 63 79.4
Glyma.08G310100 Glycine max HOM05D000042 ORTHO05D000028 8.1e-17 90.1 63 77.8
VMungo0540G1953 Vigna mungo HOM05D000042 ORTHO05D000028 6.9e-16 87.0 64 75.0
Glyma.02G287700 Glycine max HOM05D000042 ORTHO05D000028 4.9e-14 80.9 63 69.8
Glyma.14G027251 Glycine max HOM05D000042 ORTHO05D000028 3.2e-13 78.2 62 66.1
Lalb_Chr10g0106751 Lupinus albus HOM05D000042 ORTHO05D000028 7.9e-12 73.6 62 66.1
arahy.Tifrunner.gnm1.ann1.7U2XF6 Arachis hypogaea HOM05D000042 ORTHO05D000028 1.0e-11 73.2 70 62.9
arahy.Tifrunner.gnm1.ann1.FNSI1P Arachis hypogaea HOM05D000042 ORTHO05D000028 1.3e-11 72.8 70 61.4
Lalb_Chr04g0248701 Lupinus albus HOM05D000042 ORTHO05D000028 1.3e-11 72.8 62 64.5
Phvul.008G190600 Phaseolus vulgaris HOM05D000042 ORTHO05D000028 3.0e-11 71.6 62 69.4
Lj6g0013579 Lotus japonicus HOM05D000042 ORTHO05D000028 3.9e-11 71.2 68 66.2
Manes.02G085501 Manihot esculenta HOM05D000042 ORTHO05D000028 2.8e-09 65.1 72 59.7
Cc05_g09250 Coffea canephora HOM05D000042 ORTHO05D000028 8.1e-09 63.5 70 61.4
Haze_13480 Corylus avellana HOM05D000042 ORTHO05D000028 1.1e-08 63.2 58 63.8
Haze_13481 Corylus avellana HOM05D000042 ORTHO05D044788 1.1e-08 63.2 58 63.8
Manes.01G128500 Manihot esculenta HOM05D000042 ORTHO05D000028 1.8e-08 62.4 70 57.1
Cpa.g.sc50.73 Carica papaya HOM05D000042 ORTHO05D000028 3.1e-08 61.6 72 56.9
Thecc.01G160300 Theobroma cacao HOM05D000042 ORTHO05D000028 5.3e-08 60.8 72 54.2
MD09G1155200 Malus domestica HOM05D000042 ORTHO05D000028 6.9e-08 60.5 63 60.3
Prupe.3G170600 Prunus persica HOM05D000042 ORTHO05D000028 6.9e-08 60.5 64 57.8
PGR142G2120 Punica granatum HOM05D000042 ORTHO05D000028 6.9e-08 60.5 76 55.3
GSVIVG01000802001 Vitis vinifera HOM05D000042 ORTHO05D000028 6.9e-08 60.5 69 56.5
Cfa022918 Carpinus fangiana HOM05D000042 ORTHO05D000028 9.0e-08 60.1 62 59.7
QL08p043819 Quercus lobata HOM05D000042 ORTHO05D000028 1.5e-07 59.3 52 65.4
LjContig00310g0002600 Lotus japonicus HOM05D000042 ORTHO05D000028 4.5e-07 57.8 41 63.4
MD17G1141300 Malus domestica HOM05D000042 ORTHO05D000028 5.8e-07 57.4 62 51.6
Eucgr.K01195 Eucalyptus grandis HOM05D000042 ORTHO05D000028 1.7e-06 55.8 78 51.3
Hma1.2p1_1974F.1_g309660 Hydrangea macrophylla HOM05D000042 ORTHO05D000028 2.2e-06 55.5 76 52.6
COL.COLO4_33725 Corchorus olitorius HOM05D000042 ORTHO05D000028 3.8e-06 54.7 72 48.6
Duzib147G1257 Durio zibethinus HOM05D000042 ORTHO05D000028 4.9e-06 54.3 69 52.2
Gohir.D04G037800 Gossypium hirsutum HOM05D000042 ORTHO05D000028 6.4e-06 53.9 69 49.3
Gorai.012G042600 Gossypium raimondii HOM05D000042 ORTHO05D000028 6.4e-06 53.9 69 49.3


User provided reference genes

Program Settings