Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16657 Trifolium pratense HOM05D011524 ORTHO05D009491 6.3e-214 747.3 406 100.0
TPR.G34472 Trifolium pratense HOM05D011524 ORTHO05D009491 3.9e-147 525.4 444 70.0
TPR.G36881 Trifolium pratense HOM05D011524 ORTHO05D009491 2.0e-127 459.9 436 59.4
TPR.G9076 Trifolium pratense HOM05D000096 ORTHO05D000045 7.9e-100 368.2 270 69.3
TPR.G17919 Trifolium pratense HOM05D011527 ORTHO05D009491 4.4e-82 309.3 332 50.0
TPR.G27991 Trifolium pratense HOM05D011524 ORTHO05D009491 4.1e-80 302.8 341 53.4
TPR.G26714 Trifolium pratense HOM05D011524 ORTHO05D009491 7.5e-74 282.0 309 49.5
TPR.G35040 Trifolium pratense HOM05D011524 ORTHO05D009491 1.6e-68 264.2 433 38.1
TPR.G19823 Trifolium pratense HOM05D011527 ORTHO05D009491 1.4e-59 234.6 247 51.0
TPR.G34060 Trifolium pratense HOM05D011527 ORTHO05D009491 1.5e-58 231.1 318 42.1
TPR.G20476 Trifolium pratense HOM05D011524 ORTHO05D009491 5.8e-58 229.2 180 64.4
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 1.4e-56 224.6 431 35.7
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 2.4e-56 223.8 431 36.0
Medtr2g008650 Medicago truncatula HOM05D000353 ORTHO05D000174 1.5e-53 214.5 303 39.3
Medtr8g479260 Medicago truncatula HOM05D000353 ORTHO05D000174 1.5e-53 214.5 303 39.3
TPR.G30051 Trifolium pratense HOM05D000023 ORTHO05D009491 1.7e-49 201.1 322 38.8
TPR.G34936 Trifolium pratense HOM05D011524 ORTHO05D009491 1.6e-31 141.4 171 53.2
TPR.G40682 Trifolium pratense HOM05D011524 ORTHO05D009491 5.1e-30 136.3 76 86.8
TPR.G18480 Trifolium pratense HOM05D011524 ORTHO05D009491 1.2e-26 125.2 196 37.8
Phvul.005G096800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.4e-24 118.2 260 29.2
Phvul.008G122133 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 1.2e-23 115.2 214 31.3
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 2.7e-23 114.0 124 42.7
TPR.G7855 Trifolium pratense HOM05D000096 ORTHO05D000045 2.7e-23 114.0 121 41.3
Medtr6g445520 Medicago truncatula HOM05D000353 ORTHO05D000174 7.8e-23 112.5 287 30.3
Phvul.L003637 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 1.0e-22 112.1 208 31.2
Phvul.007G143500 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 5.1e-22 109.8 256 29.3
Phvul.001G105000 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 1.1e-21 108.6 237 29.5
Phvul.001G109800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 4.3e-21 106.7 213 31.9
Phvul.007G129300 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 7.3e-21 105.9 201 33.3
TPR.G518 Trifolium pratense HOM05D011524 ORTHO05D009491 7.3e-21 105.9 80 67.5
Phvul.006G191400 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 5.8e-18 96.3 195 32.3
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 5.8e-18 96.3 223 26.9
Glyma.05G083400 Glycine max HOM05D000353 ORTHO05D000174 6.4e-17 92.8 196 31.6
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 3.2e-16 90.5 249 22.5
Lj3g0013581 Lotus japonicus HOM05D007499 ORTHO05D000174 1.1e-13 82.0 233 25.3
Lj5g0012270 Lotus japonicus HOM05D007499 ORTHO05D000174 1.9e-13 81.3 228 25.0
Phvul.007G155600 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 1.9e-13 81.3 113 34.5
LjContig00155g0001945 Lotus japonicus HOM05D000353 ORTHO05D000174 3.3e-13 80.5 222 26.6
LjContig00141g0027033 Lotus japonicus HOM05D007499 ORTHO05D000174 4.3e-13 80.1 226 24.8
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 4.3e-13 80.1 220 26.4
Medtr1g075850 Medicago truncatula HOM05D000353 ORTHO05D000174 7.4e-13 79.3 190 26.8
Lj1g0016702 Lotus japonicus HOM05D007499 ORTHO05D000174 1.6e-12 78.2 319 25.1
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 2.8e-12 77.4 313 24.9
Lj6g0015228 Lotus japonicus HOM05D007499 ORTHO05D000174 3.7e-12 77.0 223 24.7
TPR.G8849 Trifolium pratense HOM05D007499 ORTHO05D009491 1.8e-11 74.7 254 25.2
Lj6g0004966 Lotus japonicus HOM05D011527 ORTHO05D009491 6.9e-11 72.8 185 24.9
Lj4g0000768 Lotus japonicus HOM05D007499 ORTHO05D000174 9.0e-11 72.4 224 25.9
Lj1g0004030 Lotus japonicus HOM05D000353 ORTHO05D000174 1.2e-10 72.0 106 34.9
Lj4g0023858 Lotus japonicus HOM05D020041 ORTHO05D030020 1.5e-10 71.6 193 30.1
Phvul.003G117700 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 2.6e-10 70.9 93 36.6
TPR.G14905 Trifolium pratense HOM05D007499 ORTHO05D009491 3.4e-10 70.5 162 26.5
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 4.5e-10 70.1 163 28.2
Lj2g0010324 Lotus japonicus HOM05D031116 ORTHO05D009491 5.8e-10 69.7 179 28.5
LjContig00081g0005726 Lotus japonicus HOM05D007499 ORTHO05D000174 2.9e-09 67.4 141 27.7
LjContig00357g0026360 Lotus japonicus HOM05D007499 ORTHO05D009491 2.9e-09 67.4 141 27.7
Phvul.010G059600 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 3.8e-09 67.0 275 25.5
Lj1g0003435 Lotus japonicus HOM05D007499 ORTHO05D000174 6.5e-09 66.2 140 27.1
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 8.4e-09 65.9 117 29.1
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 8.4e-09 65.9 117 29.1
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 1.1e-08 65.5 117 29.1
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 1.1e-08 65.5 117 28.2
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 1.1e-08 65.5 117 29.1
TPR.G15524 Trifolium pratense HOM05D007499 ORTHO05D009491 1.9e-08 64.7 261 23.8
arahy.Tifrunner.gnm1.ann1.HP5C5B Arachis hypogaea HOM05D012160 ORTHO05D009491 2.5e-08 64.3 178 23.0
Medtr3g081610 Medicago truncatula HOM05D007499 ORTHO05D009491 3.2e-08 63.9 150 26.0
TPR.G18344 Trifolium pratense HOM05D007499 ORTHO05D009491 4.2e-08 63.5 84 34.5
TPR.G27579 Trifolium pratense HOM05D007499 ORTHO05D009491 9.3e-08 62.4 224 22.3
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 1.2e-07 62.0 117 28.2
Medtr2g450180 Medicago truncatula HOM05D011527 ORTHO05D009491 2.1e-07 61.2 98 32.7
TPR.G38513 Trifolium pratense HOM05D007499 ORTHO05D009491 2.7e-07 60.8 253 24.9
Phvul.009G015800 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 4.6e-07 60.1 169 27.2
TPR.G26497 Trifolium pratense HOM05D007499 ORTHO05D009491 4.6e-07 60.1 162 24.1
Lj4g0014650 Lotus japonicus HOM05D020041 ORTHO05D030020 7.9e-07 59.3 245 25.7
Lj4g0003601 Lotus japonicus HOM05D000353 ORTHO05D000174 1.0e-06 58.9 238 23.1
TPR.G27599 Trifolium pratense HOM05D007499 ORTHO05D009491 1.3e-06 58.5 203 24.6
Lj6g0022193 Lotus japonicus HOM05D010643 ORTHO05D013332 2.3e-06 57.8 212 24.1
Phvul.005G095200 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 2.3e-06 57.8 121 31.4
TPR.G38734 Trifolium pratense HOM05D027356 ORTHO05D009491 3.9e-06 57.0 252 22.2
Medtr4g060910 Medicago truncatula HOM05D000353 ORTHO05D000174 5.1e-06 56.6 159 27.0
arahy.Tifrunner.gnm1.ann1.P2WC32 Arachis hypogaea HOM05D000353 ORTHO05D000174 6.7e-06 56.2 116 29.3
Thhalv10029348m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 6.7e-06 56.2 135 28.9
TPR.G8670 Trifolium pratense HOM05D007499 ORTHO05D009491 6.7e-06 56.2 83 30.1
TPR.G38721 Trifolium pratense HOM05D000096 ORTHO05D000045 8.7e-06 55.8 241 24.9


User provided reference genes

Program Settings