Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16651 Trifolium pratense HOM05D006122 ORTHO05D007426 1.4e-43 179.1 83 100.0
Haze_16093 Corylus avellana HOM05D006122 ORTHO05D007426 2.2e-28 128.6 67 85.1
Haze_16097 Corylus avellana HOM05D006122 ORTHO05D007426 2.2e-28 128.6 67 85.1
Psat4g219480 Pisum sativum HOM05D006122 ORTHO05D007426 2.8e-28 128.3 70 87.1
Cfa003494 Carpinus fangiana HOM05D006122 ORTHO05D007426 8.2e-28 126.7 70 82.9
Lj3g0011237 Lotus japonicus HOM05D006122 ORTHO05D007426 1.1e-27 126.3 70 85.7
Ah.07g199940 Amaranthus hybridus HOM05D006122 ORTHO05D007426 1.4e-27 125.9 76 77.6
Dinv37838 Davidia involucrata HOM05D006122 ORTHO05D007426 1.4e-27 125.9 70 80.0
Glyma.07G043200 Glycine max HOM05D006122 ORTHO05D007426 1.4e-27 125.9 63 90.5
Glyma.16G011600 Glycine max HOM05D006122 ORTHO05D007426 1.4e-27 125.9 63 90.5
Lj5A31T62 Lonicera japonica HOM05D006122 ORTHO05D007426 1.4e-27 125.9 63 90.5
Rhsim12G0212300 Rhododendron simsii HOM05D006122 ORTHO05D007426 1.4e-27 125.9 81 71.6
VMungo0331G0398 Vigna mungo HOM05D006122 ORTHO05D007426 1.8e-27 125.6 63 87.3
Actinidia26007 Actinidia chinensis HOM05D006122 ORTHO05D007426 2.4e-27 125.2 70 80.0
Phvul.010G126800 Phaseolus vulgaris HOM05D006122 ORTHO05D007426 3.1e-27 124.8 63 85.7
Ca_23414_v3 Cicer arietinum L. HOM05D006122 ORTHO05D007426 5.3e-27 124.0 70 81.4
Lalb_Chr10g0101271 Lupinus albus HOM05D006122 ORTHO05D007426 5.3e-27 124.0 67 86.6
AUR62018816 Chenopodium quinoa HOM05D006122 ORTHO05D007426 7.0e-27 123.6 78 71.8
Ciclev10026416m.g Citrus clementina HOM05D006122 ORTHO05D007426 7.0e-27 123.6 69 81.2
Medtr8g022330 Medicago truncatula HOM05D006122 ORTHO05D007426 7.0e-27 123.6 69 82.6
Hund14473 Selenicereus undatus HOM05D006122 ORTHO05D007426 7.0e-27 123.6 70 80.0
Thecc.06G126900 Theobroma cacao HOM05D006122 ORTHO05D007426 7.0e-27 123.6 70 80.0
Duzib235G1006 Durio zibethinus HOM05D006122 ORTHO05D007426 9.1e-27 123.2 70 80.0
Cpa.g.sc25.169 Carica papaya HOM05D006122 ORTHO05D007426 1.6e-26 122.5 63 85.7
Eucgr.J02608 Eucalyptus grandis HOM05D006122 ORTHO05D007426 1.6e-26 122.5 70 80.0
FvH4_6g35380 Fragaria vesca HOM05D006122 ORTHO05D007426 1.6e-26 122.5 70 78.6
Prupe.3G035300 Prunus persica HOM05D006122 ORTHO05D007426 1.6e-26 122.5 70 80.0
AUR62007187 Chenopodium quinoa HOM05D006122 ORTHO05D007426 2.0e-26 122.1 63 85.7
FAN14G0976 Fragaria x ananassa HOM05D006122 ORTHO05D007426 2.0e-26 122.1 63 84.1
EL10Ac5g12242 Beta vulgaris HOM05D006122 ORTHO05D007426 2.6e-26 121.7 68 82.4
HanXRQChr09g0277171 Helianthus annuus HOM05D006122 ORTHO05D007426 2.6e-26 121.7 63 85.7
Lsat_1_v5_gn_8_4120 Lactuca sativa HOM05D006122 ORTHO05D007426 2.6e-26 121.7 69 79.7
QL05p002004 Quercus lobata HOM05D006122 ORTHO05D007426 2.6e-26 121.7 69 76.8
Cc04_g00910 Coffea canephora HOM05D006122 ORTHO05D007426 4.5e-26 120.9 70 77.1
Hma1.2p1_0229F.1_g096920 Hydrangea macrophylla HOM05D006122 ORTHO05D007426 4.5e-26 120.9 61 86.9
Sabra10G0032200 Salix brachista HOM05D000989 ORTHO05D001287 4.5e-26 120.9 70 80.0
RcHm_v2.0_Chr2g0146911 Rosa chinensis HOM05D006122 ORTHO05D007426 5.9e-26 120.6 70 77.1
ECA238G0672 Erigeron canadensis HOM05D006122 ORTHO05D007426 7.7e-26 120.2 63 84.1
CSS0025263 Camellia sinensis var. sinensis HOM05D006122 ORTHO05D007426 1.0e-25 119.8 68 76.5
DCAR_022657 Daucus carota HOM05D006122 ORTHO05D007426 1.0e-25 119.8 68 79.4
Nn1g04517 Nelumbo nucifera HOM05D006122 ORTHO05D007426 1.0e-25 119.8 63 85.7
TAR383G0669 Trochodendron aralioides HOM05D006122 ORTHO05D007426 1.0e-25 119.8 70 77.1
vmacro22018 Vaccinium macrocarpon HOM05D006122 ORTHO05D007426 1.0e-25 119.8 63 82.5
Nn4g23234 Nelumbo nucifera HOM05D006122 ORTHO05D007426 2.2e-25 118.6 64 81.2
GSVIVG01016699001 Vitis vinifera HOM05D006122 ORTHO05D007426 2.9e-25 118.2 63 82.5
CiPaw.02G133000 Carya illinoinensis HOM05D006122 ORTHO05D007426 3.8e-25 117.9 68 77.9
Migut.I01117 Erythranthe guttata HOM05D006122 ORTHO05D007426 3.8e-25 117.9 69 75.4
Gohir.A05G138000 Gossypium hirsutum HOM05D006122 ORTHO05D007426 3.8e-25 117.9 70 75.7
Gorai.009G144400 Gossypium raimondii HOM05D006122 ORTHO05D007426 3.8e-25 117.9 70 75.7
MD17G1150700 Malus domestica HOM05D006122 ORTHO05D007426 3.8e-25 117.9 68 77.9
Gohir.D05G140100 Gossypium hirsutum HOM05D006122 ORTHO05D007426 5.0e-25 117.5 63 81.0
Potri.010G076600 Populus trichocarpa HOM05D006122 ORTHO05D007426 5.0e-25 117.5 70 77.1
HPP92_000787 Vanilla planifolia HOM05D006122 ORTHO05D007426 5.0e-25 117.5 62 82.3
PGR102G1167 Punica granatum HOM05D006122 ORTHO05D007426 8.5e-25 116.7 70 75.7
CANSAT56G0704 Cannabis sativa HOM05D006122 ORTHO05D007426 1.1e-24 116.3 70 72.9
Sed0027026 Sechium edule HOM05D006122 ORTHO05D007426 1.1e-24 116.3 70 72.9
Manes.11G015100 Manihot esculenta HOM05D006122 ORTHO05D007426 1.5e-24 115.9 70 74.3
CsaV3_4G002610 Cucumis sativus L. HOM05D006122 ORTHO05D007426 1.9e-24 115.5 63 76.2
arahy.Tifrunner.gnm1.ann1.DIA1Z1 Arachis hypogaea HOM05D006122 ORTHO05D007426 2.5e-24 115.2 65 84.6
arahy.Tifrunner.gnm1.ann1.JC3XNH Arachis hypogaea HOM05D006122 ORTHO05D007426 2.5e-24 115.2 65 84.6
MD09G1176300 Malus domestica HOM05D006122 ORTHO05D007426 2.5e-24 115.2 68 76.5
Nitab4.5_0001168g0090 Nicotiana tabacum HOM05D006122 ORTHO05D007426 2.5e-24 115.2 69 72.5
COL.COLO4_30828 Corchorus olitorius HOM05D006122 ORTHO05D007426 3.2e-24 114.8 63 79.4
Os01g0727400 Oryza sativa ssp. japonica HOM05D006122 ORTHO05D007426 3.2e-24 114.8 61 82.0
HPP92_026812 Vanilla planifolia HOM05D006122 ORTHO05D007426 4.2e-24 114.4 62 80.6
Aqoxy3G03460 Aquilegia oxysepala HOM05D006122 ORTHO05D007426 7.2e-24 113.6 62 77.4
MELO3C017781.2 Cucumis melo HOM05D006122 ORTHO05D007426 7.2e-24 113.6 70 74.3
SalBow5G3255 Salvia bowleyana HOM05D006122 ORTHO05D007426 7.2e-24 113.6 61 78.7
AL1G29610 Arabidopsis lyrata HOM05D006122 ORTHO05D007426 9.4e-24 113.2 60 85.0
AT1G17350 Arabidopsis thaliana HOM05D006122 ORTHO05D007426 9.4e-24 113.2 60 85.0
A06p13310 Brassica napus HOM05D006122 ORTHO05D007426 9.4e-24 113.2 60 85.0
C05p15780 Brassica napus HOM05D006122 ORTHO05D007426 9.4e-24 113.2 60 85.0
BolC5t30283H Brassica oleracea HOM05D006122 ORTHO05D007426 9.4e-24 113.2 60 85.0
Carub.0001s1711 Capsella rubella HOM05D006122 ORTHO05D007426 9.4e-24 113.2 67 79.1
SGA_v2.0_scaffold71G23902 Striga asiatica HOM05D006122 ORTHO05D007426 9.4e-24 113.2 67 74.6
MSTRG.22530 Avicennia marina HOM05D006122 ORTHO05D007426 1.2e-23 112.8 62 77.4
Thhalv10008577m.g Eutrema salsugineum HOM05D006122 ORTHO05D007426 2.1e-23 112.1 60 83.3
PSO832G0128 Papaver somniferum HOM05D006122 ORTHO05D007426 2.1e-23 112.1 68 72.1
TWI59G0171 Tripterygium wilfordii HOM05D006122 ORTHO05D007426 2.1e-23 112.1 63 77.8
CAN.G1227.1 Capsicum annuum HOM05D006122 ORTHO05D007426 2.7e-23 111.7 70 70.0
unitig_32.g10995 Utricularia gibba HOM05D006122 ORTHO05D007426 2.7e-23 111.7 68 73.5
BraA06t24484Z Brassica rapa HOM05D006122 ORTHO05D007426 3.6e-23 111.3 59 84.7
SEGI_37442 Sequoiadendron giganteum HOM05D006122 ORTHO05D007426 3.6e-23 111.3 68 73.5
CDE02G1839 Ceratophyllum demersum HOM05D006122 ORTHO05D007426 4.7e-23 110.9 61 78.7
Zm00001eb361800 Zea mays HOM05D006122 ORTHO05D007426 8.0e-23 110.2 60 78.3
PSO063G2922 Papaver somniferum HOM05D006122 ORTHO05D007426 1.0e-22 109.8 67 71.6
Peaxi162Scf01003g00013 Petunia axillaris HOM05D006122 ORTHO05D007426 1.0e-22 109.8 67 71.6
Sp1g15490 Schrenkiella parvula HOM05D006122 ORTHO05D007426 1.0e-22 109.8 60 81.7
SpUn0033_0060 Schrenkiella parvula HOM05D006122 ORTHO05D007426 1.0e-22 109.8 60 81.7
Oeu000384.1 Olea europaea HOM05D006122 ORTHO05D007426 1.4e-22 109.4 63 76.2
ATR0068G105 Amborella trichopoda HOM05D006122 ORTHO05D007426 1.8e-22 109.0 68 70.6
CARHR017950 Cardamine hirsuta HOM05D006122 ORTHO05D007426 3.0e-22 108.2 60 78.3
BcaNung07320 Brassica carinata HOM05D006122 ORTHO05D007426 4.0e-22 107.8 60 83.3
THA.LOC104812266 Tarenaya hassleriana HOM05D006122 ORTHO05D007426 5.2e-22 107.5 63 76.2
Solyc11g005060.2 Solanum lycopersicum HOM05D006122 ORTHO05D007426 6.7e-22 107.1 67 70.1
Sopen11g001060 Solanum pennellii HOM05D006122 ORTHO05D007426 6.7e-22 107.1 67 70.1
CARHR065320 Cardamine hirsuta HOM05D006122 ORTHO05D007426 2.6e-21 105.1 67 73.1
SHI23560 Sapria himalayana HOM05D006122 ORTHO05D007426 5.7e-21 104.0 69 65.2
Carub.0002s1927 Capsella rubella HOM05D006122 ORTHO05D007426 2.8e-20 101.7 67 70.1
AT1G72420 Arabidopsis thaliana HOM05D006122 ORTHO05D007426 8.2e-20 100.1 67 68.7
Sp5g27490 Schrenkiella parvula HOM05D006122 ORTHO05D007426 8.2e-20 100.1 67 68.7
AL2G32090 Arabidopsis lyrata HOM05D006122 ORTHO05D007426 1.4e-19 99.4 67 67.2
Thhalv10019098m.g Eutrema salsugineum HOM05D006122 ORTHO05D007426 2.4e-19 98.6 61 72.1
A07p38600 Brassica napus HOM05D006122 ORTHO05D007426 3.1e-19 98.2 61 70.5
C06p46770 Brassica napus HOM05D006122 ORTHO05D007426 3.1e-19 98.2 61 70.5
BolC6t39721H Brassica oleracea HOM05D006122 ORTHO05D007426 3.1e-19 98.2 61 70.5
BraA07t31418Z Brassica rapa HOM05D006122 ORTHO05D007426 3.1e-19 98.2 61 70.5
BcaB03g14991 Brassica carinata HOM05D006122 ORTHO05D007426 9.1e-19 96.7 61 68.9
Pp3c3_21840 Physcomitrium patens HOM05D006122 ORTHO05D007426 5.5e-16 87.4 63 61.9
Mapoly0158s0026 Marchantia polymorpha HOM05D006122 ORTHO05D007426 3.4e-13 78.2 62 51.6
CBR_g33997 Chara braunii HOM05D006122 ORTHO05D007426 1.7e-12 75.9 60 53.3
SMO165G0005 Selaginella moellendorffii HOM05D006122 ORTHO05D007426 5.0e-09 64.3 57 47.4
MCO13G567 Micromonas commoda HOM05D006122 ORTHO05D007426 1.2e-07 59.7 65 44.6


User provided reference genes

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