Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 9.1e-176 620.2 319 100.0
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 2.4e-168 595.5 319 94.0
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 1.7e-166 589.3 319 94.7
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 2.7e-159 565.5 320 90.3
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 6.1e-148 527.7 322 84.2
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 4.7e-140 501.5 320 76.9
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 4.7e-140 501.5 320 78.1
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 1.1e-139 500.4 319 77.4
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 1.4e-139 500.0 320 76.9
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 1.4e-139 500.0 320 77.8
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 1.8e-139 499.6 317 77.3
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 2.3e-139 499.2 320 76.9
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 2.3e-139 499.2 326 78.2
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 2.0e-138 496.1 320 75.6
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 3.4e-138 495.4 320 75.3
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 9.8e-138 493.8 320 76.6
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.7e-137 493.0 320 75.9
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 1.7e-137 493.0 320 75.6
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 2.2e-137 492.7 321 77.9
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 2.9e-137 492.3 320 75.0
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.9e-137 491.5 319 76.5
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 6.4e-137 491.1 320 75.6
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 1.1e-136 490.3 320 76.2
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 1.9e-136 489.6 320 75.0
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 2.4e-136 489.2 320 75.3
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 3.2e-136 488.8 320 75.6
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 9.2e-136 487.3 320 75.6
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 1.2e-135 486.9 320 75.3
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 2.7e-135 485.7 320 74.4
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 1.0e-134 483.8 320 74.1
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 1.7e-134 483.0 320 73.8
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 8.6e-134 480.7 318 76.1
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 8.6e-134 480.7 320 73.8
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 8.6e-134 480.7 320 73.8
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 1.9e-133 479.6 320 75.6
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 1.9e-133 479.6 320 73.1
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 2.5e-133 479.2 326 73.6
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 7.3e-133 477.6 322 72.7
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 1.6e-132 476.5 322 73.0
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 4.7e-132 474.9 327 71.6
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 6.2e-132 474.6 328 72.3
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 3.1e-131 472.2 320 72.8
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 3.1e-131 472.2 320 72.5
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 4.0e-131 471.9 327 71.9
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 5.2e-131 471.5 320 72.5
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 5.2e-131 471.5 320 72.5
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 5.2e-131 471.5 320 72.5
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 5.2e-131 471.5 327 71.9
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 6.8e-131 471.1 320 72.2
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 6.8e-131 471.1 320 71.9
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 8.9e-131 470.7 320 71.6
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 1.2e-130 470.3 320 71.6
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 1.2e-130 470.3 320 72.2
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 1.2e-130 470.3 320 71.6
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 7.6e-130 467.6 320 70.9
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 1.3e-129 466.8 320 73.1
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 1.7e-129 466.5 320 72.8
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 3.7e-129 465.3 322 71.7
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 3.7e-129 465.3 327 70.3
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 6.4e-129 464.5 320 70.0
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 8.3e-129 464.2 320 72.2
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 1.1e-128 463.8 323 73.4
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 1.9e-128 463.0 325 71.7
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 7.1e-128 461.1 324 70.7
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 2.1e-127 459.5 328 70.7
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 7.8e-127 457.6 321 70.7
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.1e-125 453.8 328 69.8
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 1.9e-125 453.0 324 70.1
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.5e-125 452.6 317 71.9
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 4.3e-125 451.8 328 69.5
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 4.3e-125 451.8 328 68.6
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 7.3e-125 451.1 316 71.8
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 9.6e-125 450.7 323 70.0
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 8.1e-124 447.6 328 68.9
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.1e-124 447.6 317 71.9
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 1.4e-123 446.8 328 67.7
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 5.8e-122 441.4 320 68.4
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 9.3e-120 434.1 325 68.9
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.3e-117 425.2 299 72.6
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.8e-116 422.5 299 71.6
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 5.3e-115 418.3 316 65.8
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 1.5e-114 416.8 319 66.5
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.9e-112 409.8 319 64.6
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.9e-112 409.8 304 71.1
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 5.4e-112 408.3 301 67.8
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 3.5e-111 405.6 319 62.7
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 7.9e-111 404.4 292 67.1
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 1.7e-110 403.3 317 64.0
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 7.3e-109 397.9 320 62.5
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 3.6e-108 395.6 318 59.4
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 5.8e-106 388.3 319 63.3
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 6.4e-105 384.8 258 74.8
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 7.1e-104 381.3 326 57.1
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 2.1e-103 379.8 319 60.5
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.6e-100 370.2 319 61.4
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 3.1e-99 365.9 268 69.0
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.5e-98 363.6 317 59.6
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 4.5e-98 362.1 310 59.0
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 1.9e-96 356.7 314 54.8
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 7.1e-96 354.8 229 77.7
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 3.0e-94 349.4 316 53.8
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.3e-92 344.0 319 55.2
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 8.2e-92 341.3 326 52.5
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 3.1e-91 339.3 315 53.7
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.1e-91 339.0 257 69.6
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.1e-88 330.9 290 59.3
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 2.0e-82 310.1 320 49.4
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.5e-80 303.1 306 56.5
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 2.5e-77 293.1 284 54.9
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 3.7e-76 289.3 214 68.2
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 6.9e-75 285.0 285 54.0
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.1e-64 251.1 211 59.7
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 2.8e-60 236.5 294 47.6
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 1.5e-53 214.2 128 85.2
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.8e-39 166.8 121 67.8
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 4.7e-31 139.4 268 36.6
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 7.5e-29 132.1 111 57.7
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 9.2e-27 125.2 115 56.5
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.6e-26 124.4 98 62.2
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 1.2e-23 114.8 62 83.9
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 1.8e-22 110.9 324 29.0
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.1e-22 110.2 98 59.2
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.5e-21 107.8 115 51.3
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 7.5e-21 105.5 71 71.8
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 7.1e-19 99.0 303 27.4
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.8e-14 84.3 62 62.9


User provided reference genes

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