Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16541 Trifolium pratense HOM05D004062 ORTHO05D004417 4.0e-66 254.6 128 100.0
Psat3g097240 Pisum sativum HOM05D004062 ORTHO05D004417 5.5e-55 217.6 126 83.3
Medtr7g082760 Medicago truncatula HOM05D004062 ORTHO05D004417 4.8e-51 204.5 129 84.5
Ca_08097_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 2.2e-48 195.7 129 78.3
Glyma.02G089500 Glycine max HOM05D004062 ORTHO05D004417 3.9e-37 158.3 136 64.7
VMungo1383G2158 Vigna mungo HOM05D004062 ORTHO05D004417 3.9e-37 158.3 136 64.7
Glyma.18G293500 Glycine max HOM05D004062 ORTHO05D004417 7.4e-36 154.1 134 63.4
Phvul.008G008800 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 3.1e-34 148.7 133 62.4
Lj1g0017758 Lotus japonicus HOM05D004062 ORTHO05D004417 1.6e-30 136.3 144 59.0
Lalb_Chr04g0257671 Lupinus albus HOM05D004062 ORTHO05D004417 1.8e-29 132.9 132 56.1
Psat3g097280 Pisum sativum HOM05D004062 ORTHO05D004417 1.5e-28 129.8 136 52.9
arahy.Tifrunner.gnm1.ann1.95RUG0 Arachis hypogaea HOM05D004062 ORTHO05D004417 9.7e-28 127.1 134 56.0
arahy.Tifrunner.gnm1.ann1.EB5M6E Arachis hypogaea HOM05D004062 ORTHO05D004417 9.7e-28 127.1 134 56.0
Medtr7g082740 Medicago truncatula HOM05D004062 ORTHO05D004417 4.8e-27 124.8 128 56.2
Medtr7g082730 Medicago truncatula HOM05D004062 ORTHO05D004417 8.2e-27 124.0 125 57.6
Glyma.18G293600 Glycine max HOM05D004062 ORTHO05D004417 1.1e-26 123.6 138 57.2
Medtr7g082700 Medicago truncatula HOM05D004062 ORTHO05D004417 3.1e-26 122.1 128 55.5
Psat3g097360 Pisum sativum HOM05D004062 ORTHO05D004417 3.8e-24 115.2 126 54.8
Glyma.02G089400 Glycine max HOM05D004062 ORTHO05D004417 5.0e-24 114.8 137 51.1
Medtr7g082750 Medicago truncatula HOM05D004062 ORTHO05D004417 8.5e-24 114.0 136 51.5
arahy.Tifrunner.gnm1.ann1.56V7KA Arachis hypogaea HOM05D004062 ORTHO05D004417 2.5e-23 112.5 147 51.7
arahy.Tifrunner.gnm1.ann1.RE711V Arachis hypogaea HOM05D004062 ORTHO05D004417 2.5e-23 112.5 147 51.7
Lj1g0013725 Lotus japonicus HOM05D004062 ORTHO05D004417 1.2e-22 110.2 125 53.6
VMungo1383G0607 Vigna mungo HOM05D004062 ORTHO05D004417 1.2e-22 110.2 138 51.4
Phvul.008G008700 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 3.6e-22 108.6 136 51.5
Lalb_Chr17g0335981 Lupinus albus HOM05D004062 ORTHO05D004417 4.7e-22 108.2 141 49.6
Lj1g0027246 Lotus japonicus HOM05D004062 ORTHO05D004417 1.1e-20 103.6 142 47.9
TPR.G16550 Trifolium pratense HOM05D004062 ORTHO05D004417 1.5e-20 103.2 127 50.4
TPR.G11392 Trifolium pratense HOM05D004062 ORTHO05D004417 9.7e-20 100.5 124 50.0
Ca_08095_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 4.8e-19 98.2 128 50.8
TPR.G16561 Trifolium pratense HOM05D004062 ORTHO05D004417 4.1e-18 95.1 128 48.4
Lj1g0018189 Lotus japonicus HOM05D004062 ORTHO05D004417 5.3e-18 94.7 134 46.3
Ca_08096_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 7.0e-18 94.4 128 47.7
Dinv33967 Davidia involucrata HOM05D004062 ORTHO05D004417 2.6e-17 92.4 133 44.4
Psat3g097320 Pisum sativum HOM05D004062 ORTHO05D004417 2.6e-17 92.4 120 49.2
Thecc.04G128000 Theobroma cacao HOM05D004062 ORTHO05D004417 7.7e-17 90.9 123 43.1
CiPaw.03G065300 Carya illinoinensis HOM05D004062 ORTHO05D004417 2.5e-15 85.9 138 42.0
COL.COLO4_09380 Corchorus olitorius HOM05D004062 ORTHO05D004417 2.5e-15 85.9 119 42.0
QL02p050215 Quercus lobata HOM05D004062 ORTHO05D004417 7.2e-15 84.3 136 41.9
Dinv34790 Davidia involucrata HOM05D002710 ORTHO05D002905 9.4e-15 84.0 121 44.6
Duzib138G0221 Durio zibethinus HOM05D004062 ORTHO05D004417 2.1e-14 82.8 122 43.4
CiPaw.04G044300 Carya illinoinensis HOM05D004062 ORTHO05D004417 6.1e-14 81.3 136 43.4
Lsat_1_v5_gn_3_82781 Lactuca sativa HOM05D004062 ORTHO05D004417 1.0e-13 80.5 116 39.7
Nn3g17968 Nelumbo nucifera HOM05D004062 ORTHO05D004417 1.0e-13 80.5 121 43.8
TAR629G2241 Trochodendron aralioides HOM05D004062 ORTHO05D004417 1.4e-13 80.1 123 43.9
Hma1.2p1_0500F.1_g167200 Hydrangea macrophylla HOM05D004062 ORTHO05D004417 1.8e-13 79.7 122 41.0
PGR004G1762 Punica granatum HOM05D004062 ORTHO05D004417 3.0e-13 79.0 122 39.3
Haze_14190 Corylus avellana HOM05D004062 ORTHO05D004417 6.8e-13 77.8 136 42.6
Gohir.D11G172800 Gossypium hirsutum HOM05D004062 ORTHO05D004417 1.2e-12 77.0 114 42.1
Gorai.007G185100 Gossypium raimondii HOM05D004062 ORTHO05D004417 1.2e-12 77.0 125 40.8
Nn4g23971 Nelumbo nucifera HOM05D004062 ORTHO05D004417 1.5e-12 76.6 123 42.3
Atru.chr1.1607 Acer truncatum HOM05D004062 ORTHO05D004417 2.0e-12 76.3 131 39.7
Gohir.D11G172400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 2.0e-12 76.3 114 42.1
Sabra17G0098800 Salix brachista HOM05D004062 ORTHO05D004417 2.0e-12 76.3 125 41.6
Sabra04G0064400 Salix brachista HOM05D004062 ORTHO05D004417 7.5e-12 74.3 122 45.1
Manes.01G113100 Manihot esculenta HOM05D004062 ORTHO05D004417 2.8e-11 72.4 118 43.2
Potri.004G095150 Populus trichocarpa HOM05D004062 ORTHO05D004417 2.8e-11 72.4 121 42.1
Potri.004G095200 Populus trichocarpa HOM05D004062 ORTHO05D004417 2.8e-11 72.4 121 42.1
Actinidia15903 Actinidia chinensis HOM05D002710 ORTHO05D002905 4.8e-11 71.6 123 39.8
Eucgr.F02795 Eucalyptus grandis HOM05D004062 ORTHO05D004417 4.8e-11 71.6 130 37.7
Gohir.A11G166400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 4.8e-11 71.6 121 40.5
Potri.017G119800 Populus trichocarpa HOM05D004062 ORTHO05D004417 8.3e-11 70.9 124 40.3
Cc07_g08490 Coffea canephora HOM05D004062 ORTHO05D004417 1.1e-10 70.5 130 32.3
CSS0038275 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 1.8e-10 69.7 125 39.2
Aqoxy3G03994 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 2.4e-10 69.3 127 40.2
MBI16_g14298_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 2.4e-10 69.3 117 41.0
Oeu012583.1 Olea europaea HOM05D004062 ORTHO05D004417 2.4e-10 69.3 120 41.7
Aqoxy3G03995 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 4.1e-10 68.6 125 41.6
CSS0019285 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 5.4e-10 68.2 125 39.2
MBI16_g14296_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 5.4e-10 68.2 118 37.3
MBI16_g14297_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 9.1e-10 67.4 118 38.1
Manes.02G072000 Manihot esculenta HOM05D004062 ORTHO05D004417 9.1e-10 67.4 123 39.0
TAR622G0216 Trochodendron aralioides HOM05D004062 ORTHO05D004417 9.1e-10 67.4 121 42.1
Oeu041981.1 Olea europaea HOM05D004062 ORTHO05D004417 2.7e-09 65.9 102 38.2
Potri.010G119200 Populus trichocarpa HOM05D004062 ORTHO05D004417 4.5e-09 65.1 123 39.0
PGSC0003DMG400016976 Solanum tuberosum HOM05D004062 ORTHO05D004417 4.5e-09 65.1 105 40.0
PGSC0003DMG400030667 Solanum tuberosum HOM05D004062 ORTHO05D004417 4.5e-09 65.1 105 40.0
SalBow5G1592 Salvia bowleyana HOM05D004062 ORTHO05D004417 5.9e-09 64.7 120 36.7
MSTRG.23597 Avicennia marina HOM05D004062 ORTHO05D004417 7.7e-09 64.3 118 42.4
CANSAT78G1768 Cannabis sativa HOM05D004062 ORTHO05D004417 1.0e-08 63.9 139 36.0
DCAR_010708 Daucus carota HOM05D004062 ORTHO05D004417 1.0e-08 63.9 131 34.4
SalBow3G0055 Salvia bowleyana HOM05D004062 ORTHO05D004417 1.0e-08 63.9 89 41.6
Ciclev10013071m.g Citrus clementina HOM05D004062 ORTHO05D004417 1.3e-08 63.5 123 38.2
Medtr3g100640 Medicago truncatula HOM05D004062 ORTHO05D004417 1.3e-08 63.5 67 55.2
Migut.H00242 Erythranthe guttata HOM05D004062 ORTHO05D004417 1.7e-08 63.2 124 34.7
Oeu030797.1 Olea europaea HOM05D004062 ORTHO05D004417 2.2e-08 62.8 100 38.0
Oeu030798.1 Olea europaea HOM05D004062 ORTHO05D004417 2.2e-08 62.8 100 38.0
Ciclev10013069m.g Citrus clementina HOM05D004062 ORTHO05D004417 2.9e-08 62.4 125 35.2
DCAR_010707 Daucus carota HOM05D004062 ORTHO05D004417 2.9e-08 62.4 104 37.5
Ciclev10018255m.g Citrus clementina HOM05D004062 ORTHO05D004417 3.8e-08 62.0 126 37.3
TAR622G1405 Trochodendron aralioides HOM05D004062 ORTHO05D004417 3.8e-08 62.0 118 39.0
DCAR_010706 Daucus carota HOM05D004062 ORTHO05D004417 5.0e-08 61.6 127 33.9
MBI18_g04358_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 6.5e-08 61.2 118 36.4
Aqoxy3G03997 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.1e-07 60.5 127 33.9
DCAR_010711 Daucus carota HOM05D004062 ORTHO05D004417 1.1e-07 60.5 99 38.4
Rhsim08G0083900 Rhododendron simsii HOM05D004062 ORTHO05D004417 1.1e-07 60.5 125 36.0
SGA_v2.0_scaffold202G41473 Striga asiatica HOM05D004062 ORTHO05D004417 1.1e-07 60.5 117 36.8
Ciclev10017837m.g Citrus clementina HOM05D004062 ORTHO05D004417 1.9e-07 59.7 131 35.1
DCAR_010709 Daucus carota HOM05D004062 ORTHO05D004417 2.5e-07 59.3 116 38.8
Sabra10G0089600 Salix brachista HOM05D004062 ORTHO05D004417 2.5e-07 59.3 123 35.8
MBI10_g08537_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 5.5e-07 58.2 124 34.7
DCAR_010710 Daucus carota HOM05D004062 ORTHO05D004417 9.4e-07 57.4 99 37.4
Ciclev10018020m.g Citrus clementina HOM05D004062 ORTHO05D004417 1.6e-06 56.6 128 32.8
Migut.L00492 Erythranthe guttata HOM05D004062 ORTHO05D004417 2.1e-06 56.2 105 34.3
CiPaw.05G243300 Carya illinoinensis HOM05D004062 ORTHO05D004417 6.1e-06 54.7 124 33.9
Rhsim09G0103200 Rhododendron simsii HOM05D004062 ORTHO05D004417 8.0e-06 54.3 116 33.6


User provided reference genes

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