Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16527 Trifolium pratense HOM05D008668 ORTHO05D010653 4.0e-108 394.8 203 100.0
Medtr2g014250 Medicago truncatula HOM05D008668 ORTHO05D010653 1.2e-83 313.5 205 80.5
Psat1g203600 Pisum sativum HOM05D008668 ORTHO05D010653 9.8e-83 310.5 205 80.0
Ca_00351_v3 Cicer arietinum L. HOM05D008668 ORTHO05D010653 1.6e-77 293.1 191 78.5
Glyma.13G236900 Glycine max HOM05D008668 ORTHO05D010653 4.7e-61 238.4 186 70.4
Glyma.15G076600 Glycine max HOM05D008668 ORTHO05D010653 2.6e-59 232.6 183 70.5
Lj6g0024090 Lotus japonicus HOM05D008668 ORTHO05D010653 3.3e-54 215.7 191 64.9
Phvul.006G183500 Phaseolus vulgaris HOM05D008668 ORTHO05D010653 7.1e-33 144.8 174 51.7
VMungo0251G3566 Vigna mungo HOM05D008668 ORTHO05D010653 4.3e-30 135.6 183 47.5
Glyma.13G177100 Glycine max HOM05D008668 ORTHO05D010653 5.7e-30 135.2 187 46.0
Glyma.07G199300 Glycine max HOM05D008668 ORTHO05D010653 1.6e-29 133.7 186 46.8
Ca_18577_v3 Cicer arietinum L. HOM05D008668 ORTHO05D010653 1.1e-28 131.0 179 48.6
Lj4g0022764 Lotus japonicus HOM05D008668 ORTHO05D010653 1.5e-27 127.1 196 44.4
Psat0s1495g0120 Pisum sativum HOM05D008668 ORTHO05D010653 4.5e-27 125.6 186 46.8
TPR.G16328 Trifolium pratense HOM05D008668 ORTHO05D010653 1.4e-25 120.6 186 43.5
Medtr4g088510 Medicago truncatula HOM05D008668 ORTHO05D010653 1.2e-24 117.5 187 44.9
Lalb_Chr16g0383941 Lupinus albus HOM05D008668 ORTHO05D010653 2.5e-22 109.8 197 42.1
Prupe.4G050900 Prunus persica HOM05D008668 ORTHO05D010653 1.0e-18 97.8 189 37.0
QL05p041791 Quercus lobata HOM05D008668 ORTHO05D010653 3.8e-18 95.9 186 37.6
Lalb_Chr09g0327791 Lupinus albus HOM05D008668 ORTHO05D010653 1.2e-16 90.9 192 39.6
Thecc.06G183300 Theobroma cacao HOM05D008668 ORTHO05D010653 5.7e-14 82.0 189 33.3
FAN21G3728 Fragaria x ananassa HOM05D008668 ORTHO05D010653 7.4e-14 81.6 172 37.2
FAN25G1913 Fragaria x ananassa HOM05D008668 ORTHO05D010653 1.7e-13 80.5 172 36.6
FvH4_3g08820 Fragaria vesca HOM05D008668 ORTHO05D010653 2.8e-13 79.7 168 36.9
FAN11G1694 Fragaria x ananassa HOM05D008668 ORTHO05D010653 2.8e-13 79.7 168 36.9
arahy.Tifrunner.gnm1.ann1.Q1M9Z3 Arachis hypogaea HOM05D008668 ORTHO05D010653 6.3e-13 78.6 100 52.0
Ciclev10017813m.g Citrus clementina HOM05D008668 ORTHO05D010653 1.1e-12 77.8 186 34.4
Eucgr.E03256 Eucalyptus grandis HOM05D008668 ORTHO05D010653 1.1e-12 77.8 188 34.0
FAN16G1191 Fragaria x ananassa HOM05D008668 ORTHO05D010653 2.6e-11 73.2 166 32.5
Cpa.g.sc373.2 Carica papaya HOM05D008668 ORTHO05D010653 7.7e-11 71.6 178 36.5
Cfa000511 Carpinus fangiana HOM05D008668 ORTHO05D010653 1.7e-10 70.5 192 33.3
COL.COLO4_31435 Corchorus olitorius HOM05D008668 ORTHO05D010653 3.8e-10 69.3 186 31.2
Dinv17338 Davidia involucrata HOM05D008668 ORTHO05D010653 3.8e-10 69.3 192 33.3
Haze_06401 Corylus avellana HOM05D008668 ORTHO05D010653 1.1e-09 67.8 189 31.2
Dinv40588 Davidia involucrata HOM05D008668 ORTHO05D010653 1.1e-09 67.8 173 35.8
Manes.17G048000 Manihot esculenta HOM05D008668 ORTHO05D010653 1.9e-09 67.0 187 31.6
Gorai.011G029500 Gossypium raimondii HOM05D008668 ORTHO05D010653 4.4e-06 55.8 187 29.4
CSS0028958 Camellia sinensis var. sinensis HOM05D008668 ORTHO05D010653 7.4e-06 55.1 200 28.5
Gohir.D10G027650 Gossypium hirsutum HOM05D008668 ORTHO05D010653 7.4e-06 55.1 187 29.4
Gohir.A10G027250 Gossypium hirsutum HOM05D008668 ORTHO05D010653 9.7e-06 54.7 189 27.5


User provided reference genes

Program Settings