Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 0.0e+00 1383.2 674 100.0
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 0.0e+00 1191.8 674 87.2
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 0.0e+00 1132.1 680 82.1
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 1.2e-294 1016.1 680 74.4
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 3.9e-293 1011.1 677 74.4
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 1.2e-291 1006.1 684 74.0
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 4.0e-290 1001.1 662 77.0
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 4.9e-280 967.6 681 71.8
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 1.5e-233 813.1 675 62.5
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 3.8e-232 808.5 680 59.4
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 3.7e-227 792.0 682 59.8
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 3.0e-221 772.3 682 56.2
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 1.6e-217 760.0 685 56.2
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 2.7e-214 749.2 685 55.6
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 2.2e-211 739.6 683 55.6
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 1.4e-210 736.9 678 55.9
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 2.4e-210 736.1 687 56.6
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 4.1e-210 735.3 677 57.0
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 4.5e-209 731.9 683 54.6
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 5.0e-208 728.4 682 56.9
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 1.6e-206 723.4 677 55.4
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 2.0e-204 716.5 647 56.1
GSVIVG01014072001 Vitis vinifera HOM05D005685 ORTHO05D007046 7.5e-204 714.5 680 54.4
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 1.8e-202 709.9 645 56.6
Ciclev10019120m.g Citrus clementina HOM05D005685 ORTHO05D007046 2.4e-202 709.5 680 56.2
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 5.4e-202 708.4 680 55.0
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 2.7e-201 706.1 670 53.6
Gohir.A11G290000 Gossypium hirsutum HOM05D005685 ORTHO05D007046 3.5e-201 705.7 680 55.6
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 1.0e-200 704.1 677 54.5
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 1.7e-200 703.4 674 54.9
Gohir.D11G302400 Gossypium hirsutum HOM05D005685 ORTHO05D007046 2.1e-198 696.4 680 55.4
Gorai.007G332400 Gossypium raimondii HOM05D005685 ORTHO05D007046 2.1e-198 696.4 679 55.5
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 2.2e-195 686.4 536 66.6
Sabra16G0251100 Salix brachista HOM05D005685 ORTHO05D007046 6.4e-195 684.9 701 52.4
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 8.3e-195 684.5 684 52.5
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 1.1e-194 684.1 669 53.1
Sabra11G0083400 Salix brachista HOM05D005685 ORTHO05D007046 1.9e-194 683.3 674 53.3
Thecc.07G137700 Theobroma cacao HOM05D005685 ORTHO05D007046 1.9e-194 683.3 649 56.5
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 6.0e-193 678.3 680 54.0
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 3.9e-192 675.6 720 50.4
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 5.0e-192 675.2 684 50.9
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 2.5e-191 672.9 670 51.8
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 7.3e-191 671.4 682 52.6
Glyma.15G211900 Glycine max HOM05D005685 ORTHO05D007046 1.4e-189 667.2 476 74.6
Sp1g15160 Schrenkiella parvula HOM05D005685 ORTHO05D007046 1.3e-187 660.6 677 51.4
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 3.7e-187 659.1 686 52.0
DCAR_017584 Daucus carota HOM05D005685 ORTHO05D007046 2.4e-186 656.4 677 52.0
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.3e-184 649.8 679 52.3
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 6.6e-184 648.3 672 50.0
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 8.6e-184 647.9 686 51.6
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 1.5e-183 647.1 676 50.4
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 2.5e-183 646.4 680 51.5
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 9.5e-183 644.4 672 49.9
Thhalv10006979m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 2.8e-182 642.9 680 50.1
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 3.6e-182 642.5 706 48.0
C05p15360 Brassica napus HOM05D005685 ORTHO05D007046 9.9e-180 634.4 675 50.8
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 9.9e-180 634.4 671 49.3
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 9.9e-180 634.4 697 48.8
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 4.9e-179 632.1 688 50.6
BraA06t24453Z Brassica rapa HOM05D005685 ORTHO05D007046 4.9e-179 632.1 675 51.1
A06p12940 Brassica napus HOM05D005685 ORTHO05D007046 1.9e-178 630.2 675 50.7
CARHR017570 Cardamine hirsuta HOM05D005685 ORTHO05D007046 2.4e-178 629.8 683 49.9
Duzib213G0171 Durio zibethinus HOM05D005685 ORTHO05D007046 5.4e-178 628.6 679 51.3
Carub.0001s1676 Capsella rubella HOM05D005685 ORTHO05D007046 2.3e-176 623.2 681 49.9
BolC5t30242H Brassica oleracea HOM05D005685 ORTHO05D007046 8.6e-176 621.3 702 48.6
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 1.1e-175 620.9 666 49.5
EL10Ac4g08448 Beta vulgaris HOM05D005685 ORTHO05D007046 1.9e-175 620.2 676 48.4
Sp5g33630 Schrenkiella parvula HOM05D005685 ORTHO05D007046 2.5e-175 619.8 682 49.3
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 4.3e-175 619.0 679 50.8
AT1G78540 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 3.6e-174 615.9 681 49.0
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 1.8e-173 613.6 698 49.0
AL7G51000 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 2.0e-172 610.1 678 49.1
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 1.7e-171 607.1 671 49.6
arahy.Tifrunner.gnm1.ann1.TIF1LK Arachis hypogaea HOM05D005685 ORTHO05D007046 8.4e-171 604.7 486 66.7
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 8.4e-171 604.7 612 51.6
COL.COLO4_17454 Corchorus olitorius HOM05D005685 ORTHO05D007046 1.4e-170 604.0 683 49.3
Lsat_1_v5_gn_5_126281 Lactuca sativa HOM05D005685 ORTHO05D007046 1.4e-170 604.0 662 48.0
arahy.Tifrunner.gnm1.ann1.4M0U4E Arachis hypogaea HOM05D005685 ORTHO05D007046 3.2e-170 602.8 484 66.5
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 4.6e-169 599.0 644 48.9
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 1.0e-168 597.8 759 43.3
Ah.03g134490 Amaranthus hybridus HOM05D005685 ORTHO05D007046 3.9e-168 595.9 679 47.3
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 5.6e-167 592.0 678 47.2
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 1.2e-166 590.9 641 47.6
HanXRQChr10g0305611 Helianthus annuus HOM05D005685 ORTHO05D007046 2.8e-166 589.7 676 47.6
Aa31LG7G1870 Aethionema arabicum HOM05D005685 ORTHO05D007046 3.6e-166 589.3 688 48.1
Carub.0002s2539 Capsella rubella HOM05D005685 ORTHO05D007046 3.1e-165 586.3 680 47.2
CARHR072030 Cardamine hirsuta HOM05D005685 ORTHO05D007046 5.3e-165 585.5 677 47.0
AL2G38940 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 1.2e-164 584.3 663 48.4
AUR62019678 Chenopodium quinoa HOM05D005685 ORTHO05D007046 5.6e-159 565.5 695 46.8
AT1G17040 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 2.1e-158 563.5 647 47.4
ATR0665G442 Amborella trichopoda HOM05D005685 ORTHO05D007046 4.8e-158 562.4 676 47.2
Aa31LG4G2430 Aethionema arabicum HOM05D005685 ORTHO05D007046 1.8e-157 560.5 647 46.7
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 2.7e-153 546.6 674 45.7
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 3.5e-153 546.2 681 45.7
BcaC05g25679 Brassica carinata HOM05D005685 ORTHO05D007046 1.1e-149 534.6 574 50.5
AL1G29220 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 1.7e-147 527.3 614 47.9
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 2.1e-142 510.4 676 42.6
BcaB02g06680 Brassica carinata HOM05D005685 ORTHO05D007046 8.2e-142 508.4 533 52.2
Nitab4.5_0001140g0120 Nicotiana tabacum HOM05D005685 ORTHO05D007046 1.3e-136 491.1 726 40.2
Zm00001eb004590 Zea mays HOM05D005685 ORTHO05D007046 3.3e-135 486.5 674 40.8
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 2.0e-132 477.2 731 39.3
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 3.6e-129 466.5 736 38.0
SEGI_25985 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 1.7e-126 457.6 641 40.6
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 6.5e-115 419.1 654 39.1
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 8.5e-115 418.7 660 37.6
DCAR_013783 Daucus carota HOM05D005685 ORTHO05D007046 6.7e-112 409.1 682 37.0
CSS0011531 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 6.5e-107 392.5 386 54.4
HPP92_014870 Vanilla planifolia HOM05D005685 ORTHO05D007046 8.0e-105 385.6 561 41.5
Eucgr.F03221 Eucalyptus grandis HOM05D005685 ORTHO05D007046 3.4e-103 380.2 377 51.2
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 5.7e-103 379.4 487 44.8
FAN11G3672 Fragaria x ananassa HOM05D005685 ORTHO05D007046 1.7e-102 377.9 472 47.7
Glyma.15G212100 Glycine max HOM05D005685 ORTHO05D007046 1.4e-101 374.8 218 79.4
RcHm_v2.0_Chr5g0028891 Rosa chinensis HOM05D005685 ORTHO05D007046 1.5e-98 364.8 284 60.9
TWI38G0887 Tripterygium wilfordii HOM05D005685 ORTHO05D007046 2.3e-96 357.5 258 64.3
BraA06t26874Z Brassica rapa HOM05D005685 ORTHO05D007046 1.2e-95 355.1 251 66.1
Nitab4.5_0003618g0060 Nicotiana tabacum HOM05D005685 ORTHO05D007046 1.0e-91 342.0 778 31.0
CDE04G2909 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 9.5e-74 282.3 315 49.8
Os10g0567300 Oryza sativa ssp. japonica HOM05D005685 ORTHO05D007046 1.5e-66 258.5 251 48.6
Eucgr.F03222 Eucalyptus grandis HOM05D005685 ORTHO05D007046 1.2e-65 255.4 250 52.8
CDE04G0489 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 2.5e-50 204.5 295 39.7
CSS0047371 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 2.1e-49 201.4 124 66.9
MBI19_g17443_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 2.3e-27 128.3 193 46.1
Zm00001eb210210 Zea mays HOM05D005685 ORTHO05D007046 4.1e-24 117.5 151 43.0
SEGI_34067 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 3.5e-20 104.4 187 37.4
CBR_g19551 Chara braunii HOM05D005685 ORTHO05D007046 1.9e-18 98.6 132 46.2
Mapoly0028s0082 Marchantia polymorpha HOM05D005685 ORTHO05D007046 2.5e-18 98.2 139 43.9
Pp3c7_2410 Physcomitrium patens HOM05D005685 ORTHO05D007046 2.5e-18 98.2 183 39.9
SMO145G0004 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 4.8e-17 94.0 156 43.6
CSS0003149 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 1.4e-13 82.4 89 50.6
CBR_g28498 Chara braunii HOM05D005685 ORTHO05D007046 4.6e-12 77.4 75 54.7
RcHm_v2.0_Chr5g0028901 Rosa chinensis HOM05D005685 ORTHO05D007046 7.7e-07 60.1 46 63.0
MBI19_g17438_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 3.8e-06 57.8 56 51.8


User provided reference genes

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