Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16448 Trifolium pratense HOM05D002484 ORTHO05D002541 5.7e-42 173.7 81 100.0
TPR.G20187 Trifolium pratense HOM05D002484 ORTHO05D002541 1.7e-30 135.6 77 83.1
Medtr8g023090 Medicago truncatula HOM05D002484 ORTHO05D002541 4.9e-17 90.9 72 61.1
Medtr3g020340 Medicago truncatula HOM05D002484 ORTHO05D002541 4.6e-15 84.3 77 54.5
Medtr8g012760 Medicago truncatula HOM05D002484 ORTHO05D002541 1.1e-13 79.7 68 51.5
Psat4g205640 Pisum sativum HOM05D002484 ORTHO05D002541 1.5e-13 79.3 77 54.5
Medtr7g095970 Medicago truncatula HOM05D002484 ORTHO05D002541 1.9e-13 79.0 80 53.8
Medtr8g012890 Medicago truncatula HOM05D002484 ORTHO05D002541 3.3e-13 78.2 79 53.2
Medtr8g012795 Medicago truncatula HOM05D002484 ORTHO05D002541 9.5e-13 76.6 79 50.6
Psat4g203560 Pisum sativum HOM05D002484 ORTHO05D002541 3.6e-12 74.7 75 49.3
Medtr8g012775 Medicago truncatula HOM05D002484 ORTHO05D002541 8.1e-12 73.6 79 50.6
Medtr8g012835 Medicago truncatula HOM05D002484 ORTHO05D002541 3.1e-11 71.6 73 49.3
Lj3g0015575 Lotus japonicus HOM05D002484 ORTHO05D002541 6.8e-11 70.5 75 45.3
Medtr8g012800 Medicago truncatula HOM05D002484 ORTHO05D002541 3.4e-10 68.2 79 43.0
TPR.G11184 Trifolium pratense HOM05D002484 ORTHO05D002541 5.8e-10 67.4 78 47.4
Medtr8g012860 Medicago truncatula HOM05D002484 ORTHO05D002541 2.2e-09 65.5 72 47.2
Medtr8g012875 Medicago truncatula HOM05D002484 ORTHO05D002541 2.2e-09 65.5 80 42.5
Medtr8g012805 Medicago truncatula HOM05D002484 ORTHO05D002541 2.9e-09 65.1 80 46.2
Psat4g205720 Pisum sativum HOM05D015613 ORTHO05D011265 3.7e-09 64.7 83 50.6
AL1G32330 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 6.4e-09 63.9 74 43.2
AT1G19610 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.1e-08 63.2 74 41.9
Carub.0001s1915 Capsella rubella HOM05D002484 ORTHO05D002541 1.1e-08 63.2 74 45.9
Medtr8g012705 Medicago truncatula HOM05D002484 ORTHO05D002541 1.4e-08 62.8 75 53.3
BcaB03g14925 Brassica carinata HOM05D002484 ORTHO05D002541 1.9e-08 62.4 73 37.0
Sp1g17450 Schrenkiella parvula HOM05D002484 ORTHO05D002541 1.9e-08 62.4 74 45.9
TPR.G11190 Trifolium pratense HOM05D002484 ORTHO05D002541 1.9e-08 62.4 66 51.5
Migut.N00483 Erythranthe guttata HOM05D002484 ORTHO05D002541 2.4e-08 62.0 80 42.5
Actinidia27667 Actinidia chinensis HOM05D002484 ORTHO05D002541 3.2e-08 61.6 73 46.6
BcaB03g12908 Brassica carinata HOM05D002484 ORTHO05D002541 4.1e-08 61.2 74 41.9
COL.COLO4_25963 Corchorus olitorius HOM05D002484 ORTHO05D002541 4.1e-08 61.2 52 50.0
Thhalv10009242m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 7.1e-08 60.5 74 40.5
CAN.G1126.34 Capsicum annuum HOM05D002484 ORTHO05D002541 2.1e-07 58.9 72 41.7
BraA08t34910Z Brassica rapa HOM05D002484 ORTHO05D002541 2.7e-07 58.5 74 40.5
COL.COLO4_25966 Corchorus olitorius HOM05D002484 ORTHO05D002541 2.7e-07 58.5 70 41.4
Duzib248G1325 Durio zibethinus HOM05D001795 ORTHO05D002541 2.7e-07 58.5 58 48.3
Thecc.02G082200 Theobroma cacao HOM05D002484 ORTHO05D002541 2.7e-07 58.5 70 41.4
BolC8t49576H Brassica oleracea HOM05D002484 ORTHO05D002541 4.6e-07 57.8 74 40.5
Medtr4g116060 Medicago truncatula HOM05D002484 ORTHO05D258460 4.6e-07 57.8 80 48.8
TPR.G17112 Trifolium pratense HOM05D002484 ORTHO05D002541 4.6e-07 57.8 54 48.1
Aa31LG7G4230 Aethionema arabicum HOM05D002484 ORTHO05D002541 7.8e-07 57.0 52 46.2
COL.COLO4_25964 Corchorus olitorius HOM05D002484 ORTHO05D002541 7.8e-07 57.0 77 40.3
Medtr8g012820 Medicago truncatula HOM05D002484 ORTHO05D002541 7.8e-07 57.0 81 42.0
Medtr8g012845 Medicago truncatula HOM05D002484 ORTHO05D002541 1.3e-06 56.2 82 40.2
Thhalv10029442m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.7e-06 55.8 77 37.7
Medtr8g056890 Medicago truncatula HOM05D002484 ORTHO05D002541 2.3e-06 55.5 79 46.8
Nn3g20428 Nelumbo nucifera HOM05D002484 ORTHO05D002541 3.0e-06 55.1 50 46.0
Peaxi162Scf00324g00715 Petunia axillaris HOM05D002484 ORTHO05D002541 3.0e-06 55.1 72 45.8
Medtr8g056870 Medicago truncatula HOM05D002484 ORTHO05D002541 3.9e-06 54.7 81 44.4
arahy.Tifrunner.gnm1.ann1.81M2S6 Arachis hypogaea HOM05D002484 ORTHO05D002541 5.1e-06 54.3 74 37.8
C01p00390 Brassica napus HOM05D002484 ORTHO05D002541 5.1e-06 54.3 71 38.0
Medtr8g012815 Medicago truncatula HOM05D002484 ORTHO05D002541 5.1e-06 54.3 83 41.0
Medtr8g012870 Medicago truncatula HOM05D002484 ORTHO05D002541 5.1e-06 54.3 77 39.0
Lsat_1_v5_gn_5_65860 Lactuca sativa HOM05D002484 ORTHO05D002541 6.6e-06 53.9 74 40.5
Prupe.1G376000 Prunus persica HOM05D002484 ORTHO05D002541 8.6e-06 53.5 53 45.3


User provided reference genes

Program Settings