Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16419 Trifolium pratense HOM05D002733 ORTHO05D010023 1.9e-231 805.4 405 100.0
Medtr5g089100 Medicago truncatula HOM05D002733 ORTHO05D010023 1.2e-164 583.6 398 76.4
Psat0s1289g0080 Pisum sativum HOM05D002733 ORTHO05D010023 4.7e-161 571.6 398 75.4
Ca_06190_v3 Cicer arietinum L. HOM05D002733 ORTHO05D010023 2.9e-110 402.9 398 62.1
LjContig00564g0023278 Lotus japonicus HOM05D002733 ORTHO05D010023 6.5e-102 375.2 396 54.8
Glyma.14G036400 Glycine max HOM05D002733 ORTHO05D010023 2.4e-96 356.7 407 55.5
Glyma.02G278200 Glycine max HOM05D002733 ORTHO05D010023 6.3e-81 305.4 359 54.6
Lalb_Chr10g0106141 Lupinus albus HOM05D002733 ORTHO05D010023 2.0e-74 283.9 371 50.1
Phvul.008G202700 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 1.2e-66 258.1 350 51.1
Phvul.008G165900 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 2.4e-64 250.4 351 49.6
VMungo0647G1446 Vigna mungo HOM05D002733 ORTHO05D010023 1.3e-62 244.6 399 44.6
arahy.Tifrunner.gnm1.ann1.88337C Arachis hypogaea HOM05D002733 ORTHO05D010023 8.9e-59 231.9 421 42.3
arahy.Tifrunner.gnm1.ann1.MI3W0U Arachis hypogaea HOM05D002733 ORTHO05D010023 7.5e-58 228.8 421 41.6
Thecc.09G246300 Theobroma cacao HOM05D002733 ORTHO05D010023 3.1e-35 153.7 407 33.4
QL01p016685 Quercus lobata HOM05D002733 ORTHO05D010023 6.8e-35 152.5 346 39.0
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 3.7e-33 146.7 396 35.4
CiPaw.13G148700 Carya illinoinensis HOM05D002733 ORTHO05D010023 1.9e-32 144.4 397 34.5
Potri.001G274000 Populus trichocarpa HOM05D002733 ORTHO05D010023 2.4e-32 144.1 357 33.6
Prupe.4G260600 Prunus persica HOM05D002733 ORTHO05D010023 3.3e-29 133.7 403 34.0
Cfa009898 Carpinus fangiana HOM05D002733 ORTHO05D010023 4.3e-29 133.3 387 32.8
MD03G1164300 Malus domestica HOM05D002733 ORTHO05D010023 2.4e-27 127.5 373 32.2
Dinv04578 Davidia involucrata HOM05D002733 ORTHO05D010023 2.0e-26 124.4 399 33.6
MD00G1045800 Malus domestica HOM05D002733 ORTHO05D010023 2.6e-26 124.0 402 31.8
Manes.05G200100 Manihot esculenta HOM05D002733 ORTHO05D010023 2.6e-26 124.0 389 31.9
Sabra16G0168800 Salix brachista HOM05D002733 ORTHO05D010023 3.8e-25 120.2 410 29.8
Dinv36151 Davidia involucrata HOM05D002733 ORTHO05D010023 7.1e-24 115.9 330 34.5
Hma1.2p1_0460F.1_g157570 Hydrangea macrophylla HOM05D002733 ORTHO05D010023 1.2e-23 115.2 200 43.5
TAR369G1143 Trochodendron aralioides HOM05D002733 ORTHO05D010023 3.5e-23 113.6 391 30.9
FAN20G0750 Fragaria x ananassa HOM05D002733 ORTHO05D010023 1.0e-22 112.1 242 38.4
Gorai.001G135300 Gossypium raimondii HOM05D002733 ORTHO05D010023 1.3e-22 111.7 383 32.4
Gohir.D07G125500 Gossypium hirsutum HOM05D002733 ORTHO05D010023 2.3e-22 110.9 386 32.4
RcHm_v2.0_Chr6g0258931 Rosa chinensis HOM05D002733 ORTHO05D010023 3.0e-22 110.5 176 42.6
Ciclev10017459m.g Citrus clementina HOM05D002733 ORTHO05D010023 3.9e-22 110.2 304 32.9
FvH4_2g06740 Fragaria vesca HOM05D002733 ORTHO05D010023 3.9e-22 110.2 181 43.6
FAN15G1799 Fragaria x ananassa HOM05D002733 ORTHO05D010023 3.9e-22 110.2 185 42.7
Gohir.A07G121200 Gossypium hirsutum HOM05D002733 ORTHO05D010023 1.1e-21 108.6 382 32.7
FAN24G3374 Fragaria x ananassa HOM05D002733 ORTHO05D010023 1.5e-21 108.2 182 42.9
Manes.02G136900 Manihot esculenta HOM05D002733 ORTHO05D010023 7.3e-21 105.9 407 28.3
ClCG02G022730 Citrullus lanatus HOM05D002733 ORTHO05D010023 1.6e-20 104.8 203 34.5
Rhsim13G0206300 Rhododendron simsii HOM05D002733 ORTHO05D010023 3.6e-20 103.6 210 40.0
Potri.009G068200 Populus trichocarpa HOM05D002733 ORTHO05D010023 6.2e-20 102.8 345 30.1
Actinidia06978 Actinidia chinensis HOM05D002733 ORTHO05D010023 1.4e-19 101.7 212 39.6
Oeu025912.1 Olea europaea HOM05D002733 ORTHO05D010023 1.4e-19 101.7 239 35.6
Atru.chr3.3004 Acer truncatum HOM05D002733 ORTHO05D010023 1.8e-19 101.3 263 36.5
Eucgr.J00677 Eucalyptus grandis HOM05D002733 ORTHO05D010023 2.4e-19 100.9 396 29.8
FAN27G2498 Fragaria x ananassa HOM05D002733 ORTHO05D010023 6.9e-19 99.4 306 34.0
Sed0027264 Sechium edule HOM05D002733 ORTHO05D010023 3.4e-18 97.1 219 33.3
MELO3C014550.2 Cucumis melo HOM05D002733 ORTHO05D010023 1.7e-17 94.7 219 33.8
MSTRG.18469 Avicennia marina HOM05D002733 ORTHO05D010023 2.9e-17 94.0 216 40.3
DCAR_029984 Daucus carota HOM05D002733 ORTHO05D010023 2.9e-17 94.0 376 31.1
COL.COLO4_02755 Corchorus olitorius HOM05D002733 ORTHO05D010023 4.9e-17 93.2 381 27.3
Dinv36152 Davidia involucrata HOM05D000362 ORTHO05D000325 8.4e-17 92.4 105 53.3
CsaV3_6G038850 Cucumis sativus L. HOM05D002733 ORTHO05D010023 7.1e-16 89.4 294 29.3
CANSAT54G1196 Cannabis sativa HOM05D002733 ORTHO05D010023 2.7e-15 87.4 410 31.5
TWI79G0642 Tripterygium wilfordii HOM05D002733 ORTHO05D010023 3.5e-15 87.0 389 28.3
Peaxi162Scf00004g00424 Petunia axillaris HOM05D018239 ORTHO05D010023 6.0e-15 86.3 192 36.5
Lsat_1_v5_gn_2_32340 Lactuca sativa HOM05D002733 ORTHO05D010023 1.3e-14 85.1 200 37.5
AUR62006558 Chenopodium quinoa HOM05D002733 ORTHO05D010023 3.0e-14 84.0 205 39.0
MBI13_g09212_MAGBIO Magnolia biondii HOM05D002733 ORTHO05D010023 3.0e-14 84.0 373 29.5
PGR119G1676 Punica granatum HOM05D002733 ORTHO05D010023 1.1e-13 82.0 217 35.0
AUR62000212 Chenopodium quinoa HOM05D002733 ORTHO05D010023 1.5e-13 81.6 186 39.8
PGSC0003DMG400009447 Solanum tuberosum HOM05D018239 ORTHO05D010023 3.3e-13 80.5 380 28.9
Solyc11g065010.1 Solanum lycopersicum HOM05D018239 ORTHO05D010023 5.6e-13 79.7 376 30.3
CAN.G468.8 Capsicum annuum HOM05D018239 ORTHO05D010023 7.3e-13 79.3 204 35.3
Ah.06g194720 Amaranthus hybridus HOM05D002733 ORTHO05D010023 9.6e-13 79.0 332 28.0
Aqoxy2G00438 Aquilegia oxysepala HOM05D002733 ORTHO05D010023 9.6e-13 79.0 388 28.4
Sopen11g024780 Solanum pennellii HOM05D018239 ORTHO05D010023 9.6e-13 79.0 378 29.9
TAR633G0275 Trochodendron aralioides HOM05D002733 ORTHO05D010023 9.6e-13 79.0 144 38.2
Nitab4.5_0007012g0030 Nicotiana tabacum HOM05D018239 ORTHO05D010023 1.3e-12 78.6 204 33.8
PGR102G0853 Punica granatum HOM05D002733 ORTHO05D010023 1.3e-12 78.6 204 32.4
ECA238G3721 Erigeron canadensis HOM05D002733 ORTHO05D010023 1.6e-12 78.2 380 29.2
Migut.D00675 Erythranthe guttata HOM05D002733 ORTHO05D010023 3.6e-12 77.0 344 31.1
ATR0307G041 Amborella trichopoda HOM05D002733 ORTHO05D010023 6.2e-12 76.3 156 37.8
Lsat_1_v5_gn_2_32520 Lactuca sativa HOM05D002733 ORTHO05D010023 5.3e-11 73.2 216 33.8
Sc16g0010940 Simmondsia chinensis HOM05D002733 ORTHO05D010023 6.9e-11 72.8 196 35.2
Peaxi162Scf00684g00566 Petunia axillaris HOM05D001841 ORTHO05D001767 2.6e-10 70.9 212 31.6
Sabra09G0051300 Salix brachista HOM05D002733 ORTHO05D010023 7.6e-10 69.3 88 47.7
Dinv41084 Davidia involucrata HOM05D002733 ORTHO05D010023 8.4e-09 65.9 129 36.4
HPP92_022826 Vanilla planifolia HOM05D002733 ORTHO05D010023 5.4e-08 63.2 166 33.1
Lsat_1_v5_gn_3_109980 Lactuca sativa HOM05D002733 ORTHO05D010023 2.7e-07 60.8 259 29.7
Lalb_Chr05g0219031 Lupinus albus HOM05D001841 ORTHO05D001767 4.6e-07 60.1 237 30.4
Actinidia27944 Actinidia chinensis HOM05D000058 ORTHO05D001767 1.0e-06 58.9 203 31.5
Nitab4.5_0006764g0040 Nicotiana tabacum HOM05D018239 ORTHO05D010023 1.0e-06 58.9 368 27.4
SGA_v2.0_scaffold29G12225 Striga asiatica HOM05D002733 ORTHO05D010023 1.0e-06 58.9 135 37.8
HanXRQChr03g0090311 Helianthus annuus HOM05D002733 ORTHO05D010023 1.3e-06 58.5 337 27.6
MSTRG.20139 Avicennia marina HOM05D001841 ORTHO05D001767 2.3e-06 57.8 205 31.2
DCAR_029019 Daucus carota HOM05D001841 ORTHO05D001767 8.7e-06 55.8 85 42.4


User provided reference genes

Program Settings