Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16375 Trifolium pratense HOM05D009185 ORTHO05D010768 1.4e-83 312.8 148 100.0
TPR.G4327 Trifolium pratense HOM05D000047 ORTHO05D000589 1.7e-39 166.4 126 63.5
TPR.G36275 Trifolium pratense HOM05D000047 ORTHO05D010768 7.3e-35 151.0 123 62.6
TPR.G36848 Trifolium pratense HOM05D000047 ORTHO05D000589 1.6e-34 149.8 114 61.4
TPR.G13572 Trifolium pratense HOM05D000047 ORTHO05D000589 3.6e-34 148.7 122 63.1
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 8.9e-33 144.1 128 55.5
TPR.G17648 Trifolium pratense HOM05D000047 ORTHO05D000589 3.4e-32 142.1 84 75.0
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 8.3e-31 137.5 110 59.1
TPR.G18503 Trifolium pratense HOM05D009185 ORTHO05D010768 1.9e-30 136.3 97 64.9
TPR.G20886 Trifolium pratense HOM05D009185 ORTHO05D010768 5.4e-30 134.8 130 51.5
TPR.G35157 Trifolium pratense HOM05D002881 ORTHO05D000589 7.8e-29 131.0 120 53.3
TPR.G35080 Trifolium pratense HOM05D000047 ORTHO05D000589 9.5e-27 124.0 116 52.6
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 5.1e-20 101.7 113 46.9
Ca_01749_v3 Cicer arietinum L. HOM05D011496 ORTHO05D010768 6.6e-20 101.3 80 52.5
TPR.G22869 Trifolium pratense HOM05D056069 ORTHO05D010768 1.1e-19 100.5 77 54.5
TPR.G19305 Trifolium pratense HOM05D000047 ORTHO05D000589 7.3e-19 97.8 93 45.2
TPR.G14983 Trifolium pratense HOM05D011496 ORTHO05D000589 3.6e-18 95.5 59 67.8
Ca_15675_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 4.7e-18 95.1 78 51.3
Ca_06778_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.4e-17 93.6 101 42.6
TPR.G10789 Trifolium pratense HOM05D000047 ORTHO05D000589 3.1e-17 92.4 93 43.0
VMungo0720G0831 Vigna mungo HOM05D000015 ORTHO05D048578 6.8e-17 91.3 112 39.3
TPR.G33037 Trifolium pratense HOM05D000047 ORTHO05D000589 1.2e-16 90.5 93 43.0
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 4.4e-16 88.6 123 35.8
TPR.G22842 Trifolium pratense HOM05D000047 ORTHO05D000044 7.5e-16 87.8 126 36.5
Duzib268G0258 Durio zibethinus HOM05D000047 ORTHO05D000589 2.2e-15 86.3 103 37.9
TPR.G35324 Trifolium pratense HOM05D000047 ORTHO05D000589 1.4e-14 83.6 83 41.0
Ca_13231_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.4e-14 82.8 114 38.6
Duzib041G0625 Durio zibethinus HOM05D000047 ORTHO05D000044 3.5e-13 79.0 138 34.1
Duzib205G1183 Durio zibethinus HOM05D000047 ORTHO05D000044 3.5e-13 79.0 138 34.1
TPR.G22150 Trifolium pratense HOM05D000047 ORTHO05D000589 4.6e-13 78.6 86 44.2
Actinidia34913 Actinidia chinensis HOM05D000047 ORTHO05D000589 1.7e-12 76.6 102 40.2
TPR.G10353 Trifolium pratense HOM05D000014 ORTHO05D000589 3.9e-12 75.5 84 40.5
Ca_02960_v3 Cicer arietinum L. HOM05D010731 ORTHO05D000589 5.1e-12 75.1 90 38.9
Ca_27971_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.5e-11 72.8 65 47.7
Medtr3g020105 Medicago truncatula HOM05D011496 ORTHO05D010768 3.3e-11 72.4 113 35.4
Medtr5g057715 Medicago truncatula HOM05D009185 ORTHO05D010768 3.3e-11 72.4 79 34.2
TPR.G18586 Trifolium pratense HOM05D002881 ORTHO05D000589 4.3e-11 72.0 127 31.5
Ca_22936_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 7.3e-11 71.2 54 55.6
Medtr0389s0020 Medicago truncatula HOM05D009185 ORTHO05D010768 9.5e-11 70.9 105 33.3
Medtr0159s0060 Medicago truncatula HOM05D011496 ORTHO05D010768 1.2e-10 70.5 113 35.4
Medtr2g064025 Medicago truncatula HOM05D011496 ORTHO05D010768 1.2e-10 70.5 76 40.8
Medtr5g057040 Medicago truncatula HOM05D011496 ORTHO05D000589 1.2e-10 70.5 113 34.5
Ca_02998_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.1e-10 69.7 56 53.6
Duzib160G0848 Durio zibethinus HOM05D000047 ORTHO05D000589 2.1e-10 69.7 128 33.6
Medtr0260s0010 Medicago truncatula HOM05D011496 ORTHO05D000301 2.8e-10 69.3 76 39.5
Medtr3g463110 Medicago truncatula HOM05D009185 ORTHO05D010768 2.8e-10 69.3 77 36.4
Medtr2g076103 Medicago truncatula HOM05D011496 ORTHO05D010768 3.6e-10 68.9 76 40.8
Ca_07062_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 4.7e-10 68.6 56 50.0
Medtr8g059190 Medicago truncatula HOM05D009185 ORTHO05D010768 4.7e-10 68.6 111 31.5
Medtr0014s0410 Medicago truncatula HOM05D009185 ORTHO05D010768 1.4e-09 67.0 105 34.3
Medtr1g050415 Medicago truncatula HOM05D009185 ORTHO05D010768 1.4e-09 67.0 78 35.9
Medtr3g048545 Medicago truncatula HOM05D011496 ORTHO05D010768 3.1e-09 65.9 76 38.2
Medtr7g081462 Medicago truncatula HOM05D011496 ORTHO05D010768 3.1e-09 65.9 76 38.2
MBI05_g05358_MAGBIO Magnolia biondii HOM05D057483 ORTHO05D023234 4.0e-09 65.5 105 34.3
VMungo0331G0129 Vigna mungo HOM05D000047 ORTHO05D000589 5.2e-09 65.1 63 42.9
Duzib268G1526 Durio zibethinus HOM05D000047 ORTHO05D000589 6.8e-09 64.7 61 44.3
PGR031G3326 Punica granatum HOM05D000047 ORTHO05D000589 8.9e-09 64.3 116 35.3
Medtr2g037220 Medicago truncatula HOM05D011496 ORTHO05D010768 1.2e-08 63.9 76 38.2
Sed0016672 Sechium edule HOM05D000047 ORTHO05D000589 1.5e-08 63.5 47 55.3
AUR62042972 Chenopodium quinoa HOM05D009273 ORTHO05D011122 2.0e-08 63.2 76 36.8
Medtr6g471190 Medicago truncatula HOM05D009185 ORTHO05D010768 2.0e-08 63.2 76 34.2
Thecc.02G289400 Theobroma cacao HOM05D000414 ORTHO05D000276 2.0e-08 63.2 52 50.0
Medtr0001s0260 Medicago truncatula HOM05D009185 ORTHO05D010768 2.6e-08 62.8 76 34.2
PGR031G2581 Punica granatum HOM05D000047 ORTHO05D000589 2.6e-08 62.8 135 30.4
Medtr4g045717 Medicago truncatula HOM05D009185 ORTHO05D010768 5.8e-08 61.6 107 33.6
Medtr7g034030 Medicago truncatula HOM05D009185 ORTHO05D010768 5.8e-08 61.6 111 29.7
Medtr8g095235 Medicago truncatula HOM05D009185 ORTHO05D010768 5.8e-08 61.6 109 31.2
AUR62025784 Chenopodium quinoa HOM05D010410 ORTHO05D011122 7.6e-08 61.2 70 37.1
TPR.G3978 Trifolium pratense HOM05D009185 ORTHO05D010768 7.6e-08 61.2 87 44.8
AUR62037095 Chenopodium quinoa HOM05D009273 ORTHO05D011122 9.9e-08 60.8 80 35.0
Actinidia34833 Actinidia chinensis HOM05D064681 ORTHO05D023234 1.3e-07 60.5 104 31.7
Medtr4g045943 Medicago truncatula HOM05D009185 ORTHO05D010768 1.3e-07 60.5 94 33.0
Duzib264G0666 Durio zibethinus HOM05D000047 ORTHO05D000589 1.7e-07 60.1 135 32.6
Medtr0002s0070 Medicago truncatula HOM05D009185 ORTHO05D010768 2.2e-07 59.7 103 32.0
Ca_23456_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 2.9e-07 59.3 71 38.0
CAN.G732.18 Capsicum annuum HOM05D000047 ORTHO05D000589 3.8e-07 58.9 134 31.3
AUR62042427 Chenopodium quinoa HOM05D009273 ORTHO05D011122 4.9e-07 58.5 70 35.7
Duzib114G0732 Durio zibethinus HOM05D000047 ORTHO05D000589 4.9e-07 58.5 115 32.2
PGSC0003DMG400021839 Solanum tuberosum HOM05D009254 ORTHO05D014687 4.9e-07 58.5 126 34.1
AUR62036961 Chenopodium quinoa HOM05D009273 ORTHO05D000589 6.4e-07 58.2 70 35.7
Sopen12g021880 Solanum pennellii HOM05D000047 ORTHO05D000044 6.4e-07 58.2 113 34.5
TPR.G31393 Trifolium pratense HOM05D000047 ORTHO05D000589 6.4e-07 58.2 58 41.4
Sopen03g019340 Solanum pennellii HOM05D000047 ORTHO05D000589 8.4e-07 57.8 77 40.3
Sopen10g015870 Solanum pennellii HOM05D000047 ORTHO05D000589 8.4e-07 57.8 77 40.3
AUR62026412 Chenopodium quinoa HOM05D009273 ORTHO05D011122 1.1e-06 57.4 69 34.8
Potri.008G142920 Populus trichocarpa HOM05D000047 ORTHO05D000589 1.1e-06 57.4 120 30.0
Ca_04841_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.4e-06 57.0 46 50.0
Sopen11g020130 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-06 57.0 77 40.3
Medtr7g095830 Medicago truncatula HOM05D009185 ORTHO05D010768 1.9e-06 56.6 141 29.8
CAN.G845.11 Capsicum annuum HOM05D000047 ORTHO05D000589 2.4e-06 56.2 82 32.9
Medtr0015s0170 Medicago truncatula HOM05D009185 ORTHO05D010768 2.4e-06 56.2 133 27.8
Medtr0155s0050 Medicago truncatula HOM05D009185 ORTHO05D010768 2.4e-06 56.2 71 31.0
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-06 56.2 109 30.3
Sopen10g027690 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-06 56.2 111 29.7
PGR004G2751 Punica granatum HOM05D000047 ORTHO05D000589 3.2e-06 55.8 113 34.5
PGR031G0584 Punica granatum HOM05D000047 ORTHO05D007790 3.2e-06 55.8 116 31.0
PGR051G0001 Punica granatum HOM05D000047 ORTHO05D000589 3.2e-06 55.8 116 31.0
PGR119G1186 Punica granatum HOM05D000047 ORTHO05D000589 3.2e-06 55.8 113 34.5
Sed0009764 Sechium edule HOM05D002881 ORTHO05D000589 3.2e-06 55.8 174 25.9
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 3.2e-06 55.8 81 32.1
Sopen11g022480 Solanum pennellii HOM05D000047 ORTHO05D000589 3.2e-06 55.8 109 29.4
Medtr6g464470 Medicago truncatula HOM05D002881 ORTHO05D002983 4.2e-06 55.5 107 32.7
PGR044G0485 Punica granatum HOM05D000047 ORTHO05D000589 4.2e-06 55.5 113 31.0
PGR044G1493 Punica granatum HOM05D000047 ORTHO05D000589 4.2e-06 55.5 114 34.2
PGR119G2436 Punica granatum HOM05D000047 ORTHO05D000044 5.4e-06 55.1 113 34.5
AUR62038327 Chenopodium quinoa HOM05D009273 ORTHO05D011122 7.1e-06 54.7 69 33.3
MELO3C028639.2 Cucumis melo HOM05D000047 ORTHO05D000589 7.1e-06 54.7 45 53.3
PGR142G0258 Punica granatum HOM05D000047 ORTHO05D000589 7.1e-06 54.7 113 33.6
TWI15G0372 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 7.1e-06 54.7 78 34.6
TWI18G1396 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 7.1e-06 54.7 78 34.6
AUR62041897 Chenopodium quinoa HOM05D009273 ORTHO05D011122 9.2e-06 54.3 69 36.2
Medtr7g010878 Medicago truncatula HOM05D011496 ORTHO05D010768 9.2e-06 54.3 65 38.5
PGR004G2889 Punica granatum HOM05D000047 ORTHO05D007790 9.2e-06 54.3 124 32.3
PGR031G1972 Punica granatum HOM05D000047 ORTHO05D000589 9.2e-06 54.3 113 31.9
PGR119G1948 Punica granatum HOM05D000047 ORTHO05D000589 9.2e-06 54.3 113 31.9
PGR142G0734 Punica granatum HOM05D000047 ORTHO05D000589 9.2e-06 54.3 75 36.0
Sopen08g008700 Solanum pennellii HOM05D000047 ORTHO05D000044 9.2e-06 54.3 113 33.6


User provided reference genes

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