Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1625 Trifolium pratense HOM05D006221 ORTHO05D007759 0.0e+00 1253.0 627 100.0
Ca_09279_v3 Cicer arietinum L. HOM05D006221 ORTHO05D007759 9.2e-297 1023.1 627 82.8
Medtr7g111610 Medicago truncatula HOM05D006221 ORTHO05D007759 5.0e-287 990.7 627 81.2
Psat3g014840 Pisum sativum HOM05D006221 ORTHO05D007759 2.7e-280 968.4 566 85.3
Glyma.19G226000 Glycine max HOM05D006221 ORTHO05D007759 4.3e-262 907.9 614 76.1
Lj1g0008157 Lotus japonicus HOM05D006221 ORTHO05D007759 5.3e-252 874.4 647 70.5
Lalb_Chr18g0046191 Lupinus albus HOM05D006221 ORTHO05D007759 1.8e-244 849.4 640 70.0
VMungo1383G1939 Vigna mungo HOM05D006221 ORTHO05D007759 3.4e-243 845.1 612 71.4
Phvul.001G222600 Phaseolus vulgaris HOM05D006221 ORTHO05D007759 1.0e-242 843.6 611 71.8
arahy.Tifrunner.gnm1.ann1.CKL802 Arachis hypogaea HOM05D006221 ORTHO05D007759 5.8e-235 817.8 617 68.4
arahy.Tifrunner.gnm1.ann1.7121P0 Arachis hypogaea HOM05D006221 ORTHO05D007759 6.5e-226 787.7 617 66.9
QL03p010449 Quercus lobata HOM05D006221 ORTHO05D007759 8.5e-210 734.2 620 61.9
Haze_03998 Corylus avellana HOM05D006221 ORTHO05D007759 4.7e-208 728.4 664 59.6
Manes.09G180400 Manihot esculenta HOM05D006221 ORTHO05D007759 8.0e-208 727.6 619 61.1
Atru.chr12.1555 Acer truncatum HOM05D006221 ORTHO05D007759 2.2e-202 709.5 616 59.6
Ciclev10011303m.g Citrus clementina HOM05D006221 ORTHO05D007759 6.5e-202 708.0 619 59.9
TWI38G0202 Tripterygium wilfordii HOM05D006221 ORTHO05D007759 2.5e-201 706.1 614 59.3
GSVIVG01031316001 Vitis vinifera HOM05D006221 ORTHO05D007759 6.1e-200 701.4 604 60.1
Eucgr.B01816 Eucalyptus grandis HOM05D006221 ORTHO05D007759 1.3e-197 693.7 616 60.9
CiPaw.07G035200 Carya illinoinensis HOM05D006221 ORTHO05D007759 2.4e-196 689.5 566 63.1
Dinv30939 Davidia involucrata HOM05D006221 ORTHO05D007759 9.1e-196 687.6 608 61.0
PGR083G2161 Punica granatum HOM05D006221 ORTHO05D007759 3.5e-195 685.6 618 59.1
CsaV3_1G038010 Cucumis sativus L. HOM05D006221 ORTHO05D007759 7.7e-195 684.5 621 58.6
Thecc.05G328800 Theobroma cacao HOM05D006221 ORTHO05D007759 8.5e-194 681.0 601 59.6
Gohir.A13G113400 Gossypium hirsutum HOM05D006221 ORTHO05D007759 1.1e-193 680.6 603 59.4
Duzib177G0418 Durio zibethinus HOM05D006221 ORTHO05D007759 2.1e-192 676.4 551 62.8
Sabra05G0000700 Salix brachista HOM05D006221 ORTHO05D007759 8.0e-192 674.5 625 58.6
Gorai.013G131100 Gossypium raimondii HOM05D006221 ORTHO05D007759 1.4e-191 673.7 621 57.8
Gohir.D13G116600 Gossypium hirsutum HOM05D006221 ORTHO05D007759 1.8e-191 673.3 611 58.3
Sabra05G0014800 Salix brachista HOM05D006221 ORTHO05D007759 2.3e-191 672.9 625 58.4
Sed0012716 Sechium edule HOM05D006221 ORTHO05D007759 5.2e-191 671.8 627 58.7
Actinidia11678 Actinidia chinensis HOM05D006221 ORTHO05D007759 2.6e-190 669.5 611 58.1
Hma1.2p1_0052F.1_g030430 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 5.7e-190 668.3 621 58.5
CANSAT54G2840 Cannabis sativa HOM05D006221 ORTHO05D007759 7.5e-190 667.9 613 59.2
Potri.005G003400 Populus trichocarpa HOM05D006221 ORTHO05D007759 1.7e-189 666.8 626 57.5
Lju99A6T47 Lonicera japonica HOM05D006221 ORTHO05D007759 5.4e-188 661.8 623 58.4
Solyc01g101110.3 Solanum lycopersicum HOM05D006221 ORTHO05D007759 1.6e-187 660.2 621 56.7
Sopen01g044560 Solanum pennellii HOM05D006221 ORTHO05D007759 2.0e-187 659.8 623 56.7
vmacro01605 Vaccinium macrocarpon HOM05D006221 ORTHO05D007759 1.5e-185 653.7 653 54.8
Nn3g21902 Nelumbo nucifera HOM05D006221 ORTHO05D007759 2.5e-185 652.9 606 57.6
THA.LOC104816844 Tarenaya hassleriana HOM05D006221 ORTHO05D007759 3.3e-185 652.5 616 58.3
ClCG03G017850 Citrullus lanatus HOM05D006221 ORTHO05D007759 5.5e-185 651.7 644 55.1
Oeu016545.1 Olea europaea HOM05D006221 ORTHO05D007759 9.5e-185 651.0 603 57.7
RcHm_v2.0_Chr3g0458361 Rosa chinensis HOM05D006221 ORTHO05D007759 2.3e-183 646.4 601 58.2
Migut.B00875 Erythranthe guttata HOM05D006221 ORTHO05D007759 4.0e-183 645.6 624 57.1
Prupe.6G305800 Prunus persica HOM05D006221 ORTHO05D007759 5.2e-183 645.2 599 58.4
MSTRG.16421 Avicennia marina HOM05D006221 ORTHO05D007759 2.6e-182 642.9 606 57.3
AT1G09450 Arabidopsis thaliana HOM05D006221 ORTHO05D007759 4.4e-182 642.1 602 57.1
BraA08t35366Z Brassica rapa HOM05D006221 ORTHO05D007759 1.8e-180 636.7 611 56.8
CARHR009420 Cardamine hirsuta HOM05D006221 ORTHO05D007759 2.4e-180 636.3 604 56.1
Cc02_g35760 Coffea canephora HOM05D006221 ORTHO05D007759 4.1e-180 635.6 635 55.6
FvH4_6g08390 Fragaria vesca HOM05D006221 ORTHO05D007759 3.5e-179 632.5 609 57.5
Sp1g08060 Schrenkiella parvula HOM05D006221 ORTHO05D007759 2.3e-178 629.8 609 56.2
Sc16g0009350 Simmondsia chinensis HOM05D006221 ORTHO05D007759 2.3e-178 629.8 620 55.0
Rhsim11G0101500 Rhododendron simsii HOM05D006221 ORTHO05D007759 1.1e-177 627.5 730 49.2
Thhalv10007117m.g Eutrema salsugineum HOM05D006221 ORTHO05D007759 1.9e-177 626.7 611 56.6
AL1G19970 Arabidopsis lyrata HOM05D006221 ORTHO05D007759 7.3e-177 624.8 605 56.5
BcaB03g13298 Brassica carinata HOM05D006221 ORTHO05D007759 7.3e-177 624.8 624 54.8
C08p12920 Brassica napus HOM05D006221 ORTHO05D007759 3.6e-176 622.5 625 54.7
FAN05G2605 Fragaria x ananassa HOM05D006221 ORTHO05D007759 3.6e-176 622.5 603 57.0
A08p34550 Brassica napus HOM05D006221 ORTHO05D007759 4.7e-176 622.1 624 54.8
Carub.0001s0880 Capsella rubella HOM05D006221 ORTHO05D007759 8.0e-176 621.3 603 55.2
PSO761G0564 Papaver somniferum HOM05D006221 ORTHO05D007759 1.8e-175 620.2 615 54.5
PSO210G0944 Papaver somniferum HOM05D006221 ORTHO05D007759 1.5e-174 617.1 615 54.1
SGA_v2.0_scaffold671G53422 Striga asiatica HOM05D006221 ORTHO05D007759 1.5e-174 617.1 651 53.6
Aqoxy2G02530 Aquilegia oxysepala HOM05D006221 ORTHO05D007759 4.4e-174 615.5 561 57.0
BolC8t48922H Brassica oleracea HOM05D006221 ORTHO05D007759 1.7e-173 613.6 637 53.7
SalBow5G5479 Salvia bowleyana HOM05D006221 ORTHO05D007759 2.9e-173 612.8 648 53.2
FAN02G1566 Fragaria x ananassa HOM05D006221 ORTHO05D007759 8.3e-173 611.3 587 57.1
Hund07275 Selenicereus undatus HOM05D006221 ORTHO05D007759 3.2e-172 609.4 618 54.7
AUR62006807 Chenopodium quinoa HOM05D006221 ORTHO05D007759 1.2e-171 607.4 632 53.6
HanXRQChr14g0449401 Helianthus annuus HOM05D006221 ORTHO05D007759 2.7e-171 606.3 602 55.5
Aa31LG1G5650 Aethionema arabicum HOM05D006221 ORTHO05D007759 6.0e-171 605.1 639 52.6
ECA236G2609 Erigeron canadensis HOM05D006221 ORTHO05D007759 1.5e-169 600.5 599 53.9
BcaC07g38511 Brassica carinata HOM05D006221 ORTHO05D007759 3.3e-169 599.4 606 54.6
MD04G1187300 Malus domestica HOM05D006221 ORTHO05D007759 5.6e-169 598.6 607 54.7
AUR62000466 Chenopodium quinoa HOM05D006221 ORTHO05D007759 7.3e-169 598.2 633 52.6
DCAR_005251 Daucus carota HOM05D006221 ORTHO05D007759 8.1e-168 594.7 626 54.0
MBI19_g32730_MAGBIO Magnolia biondii HOM05D006221 ORTHO05D007759 8.1e-168 594.7 626 52.9
Hund07280 Selenicereus undatus HOM05D006221 ORTHO05D007759 6.8e-167 591.7 546 57.3
Lsat_1_v5_gn_9_77141 Lactuca sativa HOM05D006221 ORTHO05D007759 4.6e-163 578.9 606 53.0
EL10Ac4g09547 Beta vulgaris HOM05D006221 ORTHO05D007759 1.7e-162 577.0 602 52.7
Peaxi162Scf00357g00116 Petunia axillaris HOM05D006221 ORTHO05D007759 5.1e-162 575.5 614 51.8
Nitab4.5_0014566g0010 Nicotiana tabacum HOM05D006221 ORTHO05D007759 1.6e-160 570.5 610 51.6
PGSC0003DMG400018290 Solanum tuberosum HOM05D006221 ORTHO05D007759 2.9e-157 559.7 611 51.2
CAN.G1248.26 Capsicum annuum HOM05D006221 ORTHO05D007759 8.4e-157 558.1 653 49.2
Nitab4.5_0001931g0080 Nicotiana tabacum HOM05D006221 ORTHO05D007759 2.9e-149 533.1 543 53.2
Hma1.2p1_0052F.1_g030440 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 8.1e-144 515.0 550 52.5
PSO017G3773 Papaver somniferum HOM05D006221 ORTHO05D007759 3.4e-142 509.6 507 54.4
Dinv30938 Davidia involucrata HOM05D006221 ORTHO05D007759 5.8e-142 508.8 397 65.7
Potri.013G003600 Populus trichocarpa HOM05D006221 ORTHO05D007759 9.6e-137 491.5 366 66.1
unitig_699.g19069 Utricularia gibba HOM05D006221 ORTHO05D007759 1.1e-135 488.0 562 50.2
Zm00001eb109970 Zea mays HOM05D006221 ORTHO05D007759 2.0e-134 483.8 612 47.4
HPP92_001185 Vanilla planifolia HOM05D006221 ORTHO05D007759 7.6e-134 481.9 694 42.7
ATR0796G167 Amborella trichopoda HOM05D006221 ORTHO05D007759 2.3e-130 470.3 612 45.8
SHI18018 Sapria himalayana HOM05D006221 ORTHO05D007759 3.4e-126 456.4 511 49.7
MELO3C015244.2 Cucumis melo HOM05D006221 ORTHO05D007759 4.2e-116 422.9 369 59.1
SEGI_23402 Sequoiadendron giganteum HOM05D006221 ORTHO05D007759 1.0e-109 401.7 648 40.4
Ah.10g026960 Amaranthus hybridus HOM05D006221 ORTHO05D007759 1.9e-108 397.5 426 51.2
AagrBONN_evm.TU.Sc2ySwM_228.2896 Anthoceros agrestis HOM05D006221 ORTHO05D007759 1.3e-104 384.8 367 52.9
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 2.0e-102 377.5 499 45.7
CDE08G0155 Ceratophyllum demersum HOM05D006221 ORTHO05D007759 1.8e-98 364.4 563 40.7
Pp3c5_21110 Physcomitrium patens HOM05D006221 ORTHO05D007759 3.7e-96 356.7 398 48.0
Mapoly0101s0065 Marchantia polymorpha HOM05D006221 ORTHO05D007759 1.3e-93 348.2 411 46.5
FAN09G0827 Fragaria x ananassa HOM05D006221 ORTHO05D007759 6.7e-90 335.9 500 44.4
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 6.5e-85 319.3 338 48.5
COL.COLO4_05510 Corchorus olitorius HOM05D006221 ORTHO05D007759 4.0e-82 310.1 619 36.8
Cpa.g.sc48.218 Carica papaya HOM05D006221 ORTHO05D007759 3.5e-70 270.4 522 36.8
Glyma.03G228700 Glycine max HOM05D006221 ORTHO05D007759 1.4e-66 258.5 370 45.1
SMO169G0298 Selaginella moellendorffii HOM05D006221 ORTHO05D007759 1.1e-63 248.8 227 54.2
Cre02.g108000 Chlamydomonas reinhardtii HOM05D006221 ORTHO05D007759 4.1e-55 220.3 348 37.4
MCO05G201 Micromonas commoda HOM05D006221 ORTHO05D007759 1.6e-38 165.2 177 47.5
Lj9A230T20 Lonicera japonica HOM05D006221 ORTHO05D007759 6.2e-35 153.3 188 45.7
PRCOL_00002024 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 1.4e-31 142.1 195 40.0
Actinidia16908 Actinidia chinensis HOM05D006221 ORTHO05D007759 2.8e-27 127.9 152 48.0
Nn5g27477 Nelumbo nucifera HOM05D001388 ORTHO05D001234 1.8e-26 125.2 129 51.2
PRCOL_00002025 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 3.8e-16 90.9 169 32.5
Cfa023263 Carpinus fangiana HOM05D006221 ORTHO05D007759 3.5e-14 84.3 427 23.9
C09p35620 Brassica napus HOM05D006221 ORTHO05D007759 1.5e-12 79.0 66 53.0
BolC9t56398H Brassica oleracea HOM05D006221 ORTHO05D007759 1.5e-12 79.0 66 53.0
FvH4_1g12820 Fragaria vesca HOM05D006221 ORTHO05D007759 8.1e-11 73.2 80 46.2
Actinidia26529 Actinidia chinensis HOM05D006221 ORTHO05D007759 1.0e-08 66.2 39 64.1


User provided reference genes

Program Settings