Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 1.8e-138 496.1 287 100.0
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 2.0e-89 333.2 290 71.4
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 4.6e-86 322.0 294 68.4
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 6.0e-86 321.6 286 71.7
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 3.6e-54 216.1 285 53.7
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 6.1e-54 215.3 283 52.7
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 1.4e-53 214.2 274 55.5
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 5.1e-53 212.2 286 52.8
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.2e-49 201.1 169 68.0
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 5.9e-49 198.7 284 50.4
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 1.4e-47 194.1 272 51.5
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 1.2e-41 174.5 241 48.1
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 5.9e-41 172.2 259 46.3
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 5.0e-40 169.1 250 45.6
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 1.1e-39 167.9 190 53.2
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 2.5e-39 166.8 153 60.8
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 3.2e-39 166.4 163 58.3
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.2e-39 166.0 158 60.1
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 1.6e-38 164.1 176 56.2
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 2.1e-38 163.7 181 56.4
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 2.7e-38 163.3 237 46.4
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 2.7e-38 163.3 294 43.2
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 3.6e-38 162.9 246 46.7
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 6.1e-38 162.2 285 48.8
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 8.0e-38 161.8 137 64.2
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 1.8e-37 160.6 176 56.2
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 4.0e-37 159.5 232 48.7
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 4.0e-37 159.5 215 48.8
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.0e-37 159.5 199 50.8
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 5.2e-37 159.1 233 48.5
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 5.2e-37 159.1 154 55.8
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 6.8e-37 158.7 185 54.6
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.2e-36 157.9 215 48.8
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 1.2e-36 157.9 127 66.1
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 1.2e-36 157.9 250 45.6
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 2.6e-36 156.8 144 62.5
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.6e-36 156.8 218 49.1
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 2.6e-36 156.8 136 63.2
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 2.6e-36 156.8 250 45.2
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 2.6e-36 156.8 250 45.2
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 5.7e-36 155.6 297 42.4
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 5.7e-36 155.6 256 48.4
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 7.5e-36 155.2 130 61.5
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 7.5e-36 155.2 255 46.3
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 9.7e-36 154.8 228 47.4
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.7e-35 154.1 197 50.8
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 2.2e-35 153.7 215 49.8
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 2.2e-35 153.7 287 41.8
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 3.7e-35 152.9 205 49.3
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 3.7e-35 152.9 215 50.7
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 3.7e-35 152.9 218 50.0
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 4.8e-35 152.5 259 44.0
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 4.8e-35 152.5 239 45.6
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 2.4e-34 150.2 154 54.5
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 4.1e-34 149.4 229 44.1
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 4.1e-34 149.4 238 46.2
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 4.1e-34 149.4 255 46.3
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 7.0e-34 148.7 249 43.8
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 9.1e-34 148.3 207 48.3
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 9.1e-34 148.3 110 68.2
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 1.6e-33 147.5 237 46.8
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 2.0e-33 147.1 222 47.3
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 3.5e-33 146.4 209 47.8
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 4.5e-33 146.0 133 60.9
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 4.5e-33 146.0 227 45.8
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 7.7e-33 145.2 213 46.5
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 7.7e-33 145.2 267 43.8
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.0e-32 144.8 175 49.7
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 1.3e-32 144.4 256 44.9
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 1.3e-32 144.4 289 42.9
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 2.2e-32 143.7 181 51.4
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 2.9e-32 143.3 146 54.8
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 5.0e-32 142.5 293 41.6
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 3.2e-31 139.8 220 44.5
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 7.2e-31 138.7 136 58.1
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 9.4e-31 138.3 112 63.4
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 1.2e-30 137.9 156 50.0
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 2.7e-30 136.7 184 50.5
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 2.7e-30 136.7 255 42.7
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 2.7e-30 136.7 249 44.2
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 3.6e-30 136.3 139 56.1
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 3.6e-30 136.3 139 56.1
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 3.6e-30 136.3 131 55.7
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 6.1e-30 135.6 162 50.6
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 1.0e-29 134.8 153 51.0
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.0e-29 134.8 215 44.7
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 1.8e-29 134.0 285 39.6
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 2.3e-29 133.7 275 40.4
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 2.0e-28 130.6 176 50.0
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 3.4e-28 129.8 173 48.0
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 4.4e-28 129.4 141 53.9
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.3e-27 127.9 230 40.4
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.7e-27 127.5 158 47.5
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 1.7e-27 127.5 184 45.1
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 8.3e-27 125.2 223 43.9
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 5.4e-26 122.5 204 43.1
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 5.4e-26 122.5 204 43.1
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 7.7e-25 118.6 200 42.5
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 7.7e-25 118.6 200 42.5
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 1.5e-23 114.4 203 42.4
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 3.3e-23 113.2 168 44.6
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.8e-21 107.5 243 39.1
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 5.2e-21 105.9 181 43.6
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 6.8e-21 105.5 193 39.4
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.5e-20 104.4 115 53.0
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 1.1e-18 98.2 215 36.7
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 1.2e-17 94.7 104 47.1
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.9e-16 90.1 63 66.7
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.9e-16 90.1 63 66.7
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.9e-16 89.7 65 63.1
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.9e-16 89.7 59 69.5
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 3.9e-16 89.7 64 64.1
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 6.6e-16 89.0 55 78.2
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.5e-15 87.0 63 63.5
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 3.3e-15 86.7 51 82.4
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 7.3e-15 85.5 149 34.2
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 2.8e-14 83.6 57 70.2
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 5.8e-12 75.9 54 72.2
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 7.5e-12 75.5 84 45.2
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 4.9e-11 72.8 48 72.9
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 1.4e-10 71.2 76 53.9


User provided reference genes

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