Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16230 Trifolium pratense HOM05D004473 ORTHO05D005652 1.0e-28 129.4 67 100.0
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 4.9e-15 84.0 78 62.8
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 4.9e-15 84.0 78 62.8
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 4.9e-15 84.0 78 62.8
Medtr7g098060 Medicago truncatula HOM05D004473 ORTHO05D005652 9.3e-14 79.7 48 83.3
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 8.2e-10 66.6 48 68.8
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 1.4e-09 65.9 63 63.5
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 4.0e-09 64.3 68 54.4
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 5.3e-09 63.9 49 63.3
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.3e-09 63.9 50 66.0
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 6.9e-09 63.5 77 50.6
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 1.2e-08 62.8 48 66.7
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 78 50.0
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 78 50.0
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 78 50.0
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 78 50.0
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 78 50.0
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 78 50.0
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 78 50.0
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 78 50.0
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 4.5e-08 60.8 50 64.0
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 4.5e-08 60.8 71 49.3
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 1.3e-07 59.3 78 46.2
Medtr2g089600 Medicago truncatula HOM05D004473 ORTHO05D005652 1.7e-07 58.9 33 84.8
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.9e-07 58.2 78 50.0
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.9e-07 58.2 78 50.0
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 3.8e-07 57.8 52 61.5
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 4.9e-07 57.4 78 48.7
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.1e-06 56.2 76 51.3
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 2.5e-06 55.1 78 44.9
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 4.2e-06 54.3 78 44.9
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 4.2e-06 54.3 78 44.9
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 4.2e-06 54.3 78 44.9
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 4.2e-06 54.3 78 44.9
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 4.2e-06 54.3 78 44.9
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 4.2e-06 54.3 78 44.9
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 5.5e-06 53.9 78 44.9
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 5.5e-06 53.9 70 48.6
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 5.5e-06 53.9 70 48.6
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 9.3e-06 53.1 79 45.6


User provided reference genes

Program Settings