Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 4.7e-94 347.8 173 100.0
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 7.8e-81 303.9 174 90.8
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 6.2e-78 294.3 172 87.8
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 2.9e-67 258.8 173 79.2
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 3.8e-67 258.5 172 79.7
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 2.4e-66 255.8 174 79.9
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 2.1e-65 252.7 176 75.6
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 1.0e-64 250.4 174 76.4
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 3.0e-64 248.8 179 74.9
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 4.3e-63 245.0 172 77.3
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 5.6e-63 244.6 173 74.6
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 1.7e-59 233.0 174 71.8
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 4.6e-57 224.9 176 68.2
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 1.3e-56 223.4 177 68.4
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.3e-56 223.4 177 68.4
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 2.3e-56 222.6 177 68.9
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 3.0e-56 222.2 176 64.8
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 5.1e-56 221.5 182 65.9
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 5.1e-56 221.5 174 69.0
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 8.7e-56 220.7 177 68.4
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 8.7e-56 220.7 184 65.2
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 1.1e-55 220.3 177 67.2
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 1.9e-55 219.5 174 67.2
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 1.9e-55 219.5 179 66.5
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 3.3e-55 218.8 176 66.5
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 7.4e-55 217.6 181 65.7
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 7.4e-55 217.6 177 66.1
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 9.6e-55 217.2 174 67.8
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 1.6e-54 216.5 180 66.1
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 1.6e-54 216.5 181 64.6
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 1.6e-54 216.5 175 66.9
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 2.1e-54 216.1 172 65.7
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 2.8e-54 215.7 172 65.1
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 2.8e-54 215.7 172 65.1
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 2.8e-54 215.7 174 65.5
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 4.8e-54 214.9 171 64.9
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 1.1e-53 213.8 178 64.0
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 1.8e-53 213.0 174 64.4
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 2.4e-53 212.6 176 65.9
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 3.1e-53 212.2 174 64.9
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 4.1e-53 211.8 166 67.5
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 5.3e-53 211.5 176 65.3
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 9.0e-53 210.7 181 62.4
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 1.5e-52 209.9 176 65.3
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 1.5e-52 209.9 173 61.8
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 2.0e-52 209.5 173 65.3
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 2.0e-52 209.5 173 65.3
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 2.0e-52 209.5 173 65.3
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 2.0e-52 209.5 143 74.1
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 2.0e-52 209.5 182 62.1
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 2.0e-52 209.5 177 63.3
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 2.6e-52 209.1 160 68.1
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 2.6e-52 209.1 176 64.8
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 3.4e-52 208.8 172 65.1
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 3.4e-52 208.8 172 65.1
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 3.4e-52 208.8 176 65.3
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 3.4e-52 208.8 148 73.6
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 3.4e-52 208.8 179 63.7
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 5.8e-52 208.0 173 66.5
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 7.6e-52 207.6 138 75.4
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 7.6e-52 207.6 173 63.6
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 7.6e-52 207.6 139 74.1
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 1.3e-51 206.8 175 62.3
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 1.3e-51 206.8 173 63.6
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 1.3e-51 206.8 173 63.6
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 1.3e-51 206.8 173 63.6
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 2.2e-51 206.1 176 61.9
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 3.8e-51 205.3 173 63.6
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 6.5e-51 204.5 125 78.4
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 8.4e-51 204.1 173 61.8
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 3.2e-50 202.2 182 59.3
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 5.5e-50 201.4 139 74.8
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 5.5e-50 201.4 175 60.6
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 1.2e-49 200.3 196 58.7
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 1.2e-49 200.3 119 79.8
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 1.6e-49 199.9 139 74.8
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 3.5e-49 198.7 120 80.8
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 4.6e-49 198.4 180 62.2
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 2.3e-48 196.1 139 71.9
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 3.0e-48 195.7 138 72.5
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 3.9e-48 195.3 175 61.1
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 5.1e-48 194.9 143 67.8
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 5.1e-48 194.9 143 67.8
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 6.7e-48 194.5 181 61.3
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 8.7e-48 194.1 183 58.5
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 8.7e-48 194.1 119 77.3
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 2.5e-47 192.6 177 61.6
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 9.7e-47 190.7 172 60.5
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 1.6e-46 189.9 113 81.4
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 2.2e-46 189.5 148 65.5
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 1.8e-45 186.4 159 61.0
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 3.1e-45 185.7 128 71.1
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 5.3e-45 184.9 181 56.9
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 1.2e-44 183.7 138 65.9
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 2.0e-44 183.0 118 76.3
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 5.9e-44 181.4 144 66.7
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 1.9e-42 176.4 117 70.9
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 2.3e-40 169.5 124 68.5
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 3.0e-40 169.1 148 61.5
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 1.5e-39 166.8 179 54.7
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 3.1e-37 159.1 177 53.1
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 4.1e-37 158.7 139 61.2
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 4.7e-33 145.2 103 69.9
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 4.7e-33 145.2 103 69.9
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 9.4e-26 120.9 106 60.4
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 1.2e-25 120.6 69 79.7
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 2.0e-23 113.2 173 45.1
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 2.6e-23 112.8 120 55.0
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 2.2e-22 109.8 58 86.2
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.7e-19 100.1 112 54.5
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 2.2e-19 99.8 115 50.4
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 5.0e-19 98.6 76 65.8
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 9.8e-07 57.8 56 66.1


User provided reference genes

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